Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17157 LG4 32557837 32561116 PREDICTED: receptor-like protein kinase HSL1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 32557897 missense_variant p.Val21Ile
A/G 32557930 missense_variant p.Asn32Asp
A/C 32557970 missense_variant p.Glu45Ala
A/T 32558156 missense_variant p.Asn107Ile
T/G 32558460 missense_variant p.Asp208Glu
T/G 32558479 missense_variant p.Phe215Val
A/G 32558574 synonymous_variant p.Glu246Glu
C/G 32558648 missense_variant p.Ala271Gly
G/T 32558707 stop_gained p.Glu291*
T/A 32558818 missense_variant p.Leu328Met
A/G 32559414 synonymous_variant p.Gly526Gly
T/A 32559567 synonymous_variant p.Pro577Pro
G/T 32559620 missense_variant p.Gly595Val
C/T 32559806 missense_variant p.Ala657Val
A/G 32559848 missense_variant p.Lys671Arg
T/C 32560320 upstream_gene_variant
A/T 32560326 upstream_gene_variant
T/G 32560329 upstream_gene_variant
A/C 32560341 upstream_gene_variant
G/A 32560345 upstream_gene_variant
G/A 32560347 upstream_gene_variant
A/G 32560358 upstream_gene_variant
T/C 32560367 upstream_gene_variant
A/G 32560377 upstream_gene_variant
C/T 32560426 upstream_gene_variant
A/G 32560516 upstream_gene_variant
T/C 32560533 upstream_gene_variant
C/G,A 32560543 upstream_gene_variant
A/G 32560548 upstream_gene_variant
G/A 32560559 upstream_gene_variant
T/A 32560586 upstream_gene_variant
G/C 32560597 upstream_gene_variant
A/G 32560622 upstream_gene_variant
G/A 32560628 upstream_gene_variant
G/C 32560637 upstream_gene_variant
G/A 32560646 upstream_gene_variant
T/C 32560682 upstream_gene_variant
C/T 32560688 upstream_gene_variant
T/A 32560792 upstream_gene_variant
G/T 32561040 missense_variant p.Leu790Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17157.1
MELFTSSSSSSSYLKLLLQSVVILLLVFTRANSESQSQLHDQEHEILLRIKQYLENPSYLSHWTSSNIAHCSWPEITCSNDDSVTGLTLSNNSITQTIPSFICDLKNLTHVDFYNNLIPGEFPTHLLNCSKLEYLDLSMNDFVGSIPRDIGNLSNLQFLNLGYTNFSGDIPSSIGSLKQLTNLQFQNCLLNGTIPSEIGNLSNLEFLDLSSNSMFPPSRLHDNWMRLSKLKFFFMFDCNLVGEIPETIGNMVALERLDLSQNDLSGEIPGALFMLKNLNIMFLSRNKLSGEIPDVVEALNLTIIDLTRNSLSGKIPDGFGKLQNLTGLALSLNNLHGEIPQSIGLLPSLIDFKVFSNNLSGTLPPDFGRHSMLKTFLISNNSFSGKLPENLCYNGHLENLTTYENHLSGELPQSLGNCSSLTDLKIYSNEFSGSIPSGLWTFNLSTFMVSHNKFTGELPERLSSTISRLEIDYNQFYGSIPTGVSSWTNVVVFQASKNNLNESIPRELTALPMLTTLLLDQNQLTGPLPSDIISWKSLRNLNLRQNQLSGHIPDSIGHLPDLNQLDLSENQFSGQIPSLPSRLTNLNLSSNYLTGRVPSTFENSAFETSFLNNSDLCSDTPALNLRSCNHSPQSESNDSSWSVALIISLVVVACFLALLASFLIIRFYRKKKSGLDRSWKLISFQRLSFTESNIVSSLTENNIIGSGGYGAVYRAAVDEWAWRHHQLGSNIEELLDKEVVESSYSGEMCKVFTLGLMCTETLPSARPSMKEVLQVLLSCDESFSKGESNICHCDDVVPFLKNSRREHKLDIDNDS*


CDS Sequence:
>Vu_17157.1
ATGGAACTGTTCACCTCATCATCATCATCATCATCATATCTTAAACTGCTGCTTCAGTCTGTTGTGATCTTACTCCTGGTTTTTACGCGTGCAAACTCCGAATCTCAATCTCAGTTGCATGATCAAGAACATGAAATCTTACTGAGGATAAAGCAGTACCTTGAAAACCCTTCATATCTCAGTCACTGGACATCATCAAACATCGCTCACTGCTCTTGGCCAGAGATAACGTGTAGCAACGACGATTCTGTCACTGGATTGACATTGTCCAACAATAGCATCACTCAGACCATACCCTCTTTCATATGTGACCTCAAAAACCTCACACACGTTGATTTCTACAACAATCTGATTCCTGGGGAGTTCCCAACACATCTCCTCAATTGCTCCAAGTTGGAGTACCTAGACCTGTCTATGAACGACTTTGTTGGCAGCATCCCTCGTGACATTGGCAACTTATCTAATCTGCAGTTTCTTAACCTTGGTTACACCAATTTCTCTGGTGACATTCCTTCTAGCATTGGAAGTCTAAAGCAACTCACAAATCTTCAATTTCAGAACTGCCTATTGAATGGAACTATCCCCTCTGAGATTGGCAACTTGTCCAATCTTGAATTCTTGGATTTGTCATCTAACTCCATGTTCCCTCCTTCGAGGTTGCATGATAACTGGATGCGGTTGAGCAAGTTGAAGTTCTTTTTCATGTTTGACTGCAACTTGGTCGGGGAGATCCCTGAAACTATTGGAAACATGGTGGCTTTGGAGAGATTGGATCTATCGCAGAACGATTTAAGTGGTGAAATTCCCGGGGCCTTGTTCATGCTGAAGAATCTGAACATAATGTTTCTATCTAGAAACAAGCTTTCTGGGGAAATACCTGATGTGGTTGAAGCACTGAATTTGACCATCATTGATCTAACGCGAAATTCTCTCTCAGGAAAAATACCAGATGGTTTTGGAAAGCTTCAAAATTTAACTGGTTTGGCTTTGTCTTTAAATAACTTACATGGGGAGATACCACAGAGCATAGGCCTTCTTCCATCTCTGATAGATTTTAAAGTGTTTTCCAACAATTTATCAGGTACTCTTCCTCCTGACTTTGGCCGCCACTCAATGCTTAAAACCTTTTTGATTTCAAATAATAGTTTTAGTGGAAAGCTACCCGAGAACTTGTGCTATAATGGTCACTTGGAAAACTTAACTACCTATGAAAATCATCTTAGTGGGGAGTTGCCACAATCACTTGGTAATTGTAGTAGCCTGACAGATCTGAAAATTTATAGTAACGAGTTTTCTGGTAGCATTCCAAGTGGTCTTTGGACTTTCAATCTGTCAACTTTCATGGTGAGCCATAACAAGTTCACTGGTGAGCTTCCTGAGAGATTGTCCTCAACTATTTCGCGTTTGGAGATAGATTACAATCAGTTTTATGGTAGTATTCCAACTGGGGTGTCTTCATGGACTAATGTGGTTGTGTTTCAAGCCAGTAAGAACAACCTTAATGAGAGTATTCCAAGAGAGTTAACAGCTCTTCCAATGCTAACAACACTATTGCTTGATCAGAACCAGCTCACAGGACCACTTCCGTCTGATATAATATCATGGAAGTCCCTTAGGAATCTAAATTTGCGACAAAACCAACTCTCTGGACATATTCCTGATTCAATTGGTCATTTACCTGATCTCAACCAACTTGATCTGTCAGAAAATCAGTTCTCGGGTCAAATTCCTTCTCTTCCTTCCAGACTCACCAATCTCAATCTTTCCTCCAATTACTTGACAGGGAGGGTTCCAAGTACATTTGAAAATTCTGCTTTTGAAACCAGCTTTTTGAACAATTCTGACCTCTGTTCTGATACTCCAGCACTGAATCTCAGGTCATGTAATCATAGCCCTCAAAGTGAAAGCAATGACTCATCTTGGTCTGTTGCTTTGATCATAAGTCTGGTGGTAGTGGCCTGTTTCCTGGCTTTGTTGGCATCGTTCTTGATAATCAGATTTTACAGAAAAAAAAAGAGTGGATTGGATAGGTCATGGAAGCTCATTTCTTTCCAAAGGCTGAGTTTCACTGAATCAAACATAGTGTCATCACTCACAGAAAATAATATTATTGGCAGTGGTGGCTATGGTGCAGTATACCGCGCTGCAGTTGATGAGTGGGCGTGGCGGCACCATCAATTAGGAAGCAACATAGAAGAGCTGCTAGACAAAGAAGTCGTGGAATCCAGTTACTCAGGTGAAATGTGTAAGGTTTTCACACTAGGTCTCATGTGCACTGAAACACTTCCTTCTGCTAGACCATCCATGAAAGAGGTTCTACAAGTTTTGCTTTCTTGTGATGAATCATTTTCTAAGGGAGAGAGTAATATTTGCCACTGTGATGATGTTGTTCCCTTTCTTAAAAATTCAAGAAGAGAGCACAAGTTGGATATTGATAATGATAGCTAG


Promoter Sequence:
>Vu_17157::LG4:32555837-32557837(+)
AAATGTAAACATATTGATTTATGGTATTAATTTTAAAAAATTAAATACTACACATATTCATATTTAATCAAAATTTTAAGATTAATGTGTATCCAACTTGTTTATTTAATATATATAAAACTGTGAAAATAAATTAATAAAAACTTTGATATTTTTAATGAGAAGATAAGTTGGATGGTTAAATTATATGGTAGACATGCATTCATTATTCAGTGTACTATTTAAAGAAATGGAAGTGAAATTGAAGTCAATTTTTTGGCATTTTCGCTCCTTCCACAGTTCCCTTAGCTAGAAGGCAACGATCATTTTCTGAATGGTGGTGCCAGCATCCAAATTCAGACTTCAATCAACCATTTTCTGATGAACTGTCATTGAAATTTCCTCCTAAATCAAAGGATAAAACTAGAAAACAAAAAGTTTTGTTGGAAAAGAAAAGTATACAAAGACAATGCAATTTCATCCAAGTGTTTGTGGGGATTGAAGTGTGTTGGGAATACTAGAATTTTATTAGATAAAAGAATAACAATAGAATGAAATATTTTTCTATTCCTTTGAGACACAATACAGAATTAAAAAAATCATAAATATATGAATTTTTTTATTTAAAAAAAGAGAGTAAAAATTGAGAAAAAAATAATGTTAAATGAATTAAAAAATTGATGTCTGAAAATATCATTTCTTTATGTAAAAGTAAAAAATAAAAATTTTGAATATAAAAAAGAAGACCCGTAAATTTATTGTTTTAAAATTTTGAATATACAAAGAAAATTTATAAAATTTACTTTTAAAACTAAAATTTTGGATTAAAAATGGTGTGAAATTCACCGGATTTATTAAACATTTAGAATGAAAATGAATTTAAAATAAGAAAAATAATACTTTTTGATATTATATTTTCTTACTTATTTATTTTTTTATTTTTTAAAAATACAAAAACTTATCAATTTATAATCATTTTACCCTTATAATATATATAAAATGAATATCACTTTTCAATTACACTTAAAATAATCCTAATATTTATTTCCACCTTCATAAAGTCTTTGGGACACGAGTGGGAGAAAATTCTAAGTTCACAGGTCTTGTTAGTTTATTTAGTTATATGTTTGACCAGTGATTTTTTTATTTTCTCATCAACCCATTAATTATCCATTATTCTAAATCACTGCATAGAAAATTTGAAATGGGTGGAAAGTCAAACACTTTGGTAATCTACAACGGGTGCTGAATATTATTATTATTATATATCTTTGTAATATGAAAAAAATTAAACTCTTTTTACTTTTAATTTCTAAAATAAATAATAAGACTTTAAAATTAAGTATGAAAATAAACATGCTAGAAAAAAATAAAGCATATCTTTACTTTTGAAAGTCTGACACCTCTCATGAAGTGCAAACCGATTTTAAAATTAAATTATCAAGTCAACGTCAATGATACATGATATAAATAAATATGCAATCAGATATTATCAATATGTTAGAAAAAGAGAATCTTTCACAGAAGAATGCTAGGAGGATAAGTTATGATGCAGAAGCAACAGAGTACAATAATGCAGAATTCTATAATGGAATTTTTATATAATTAATATTATGTGGAAAGTTTATATCTATCCAATTTTTAAATGCTCGTAAACTTAATATTTAGCTTAACTTCTACATAAAAAAATAGACATCATGAGAAAAATTGCAGATGGAAACACCCATTGGCTCGATGGTTACAAGGTGGTTTTCAACTGCTATTGCTGCGTGACTTGACCGAAGTGTTCAAACATTAGATGTTTTTGTTTTGATTTGTCTGAAGTAGTTATACTTTTCGCAGTTCGACTTCTATGTATTTTCATACATTGGCATTGACTTTCTGACCCGCCAACTTTGAATGGTATGAAGGAAACCAACAATTCTCAACTTTTCAGCATGTAAAAACCAAACATCATACCATGAAATCTGTAACAAGTTAGCTTCTTTTCTTTTCAAACTTGAAAAACTGAAGCACCAAGA


Gene Sequence:
>Vu_17157(+)
ATGGAACTGTTCACCTCATCATCATCATCATCATCATATCTTAAACTGCTGCTTCAGTCTGTTGTGATCTTACTCCTGGTTTTTACGCGTGCAAACTCCGAATCTCAATCTCAGTTGCATGATCAAGAACATGAAATCTTACTGAGGATAAAGCAGTACCTTGAAAACCCTTCATATCTCAGTCACTGGACATCATCAAACATCGCTCACTGCTCTTGGCCAGAGATAACGTGTAGCAACGACGATTCTGTCACTGGATTGACATTGTCCAACAATAGCATCACTCAGACCATACCCTCTTTCATATGTGACCTCAAAAACCTCACACACGTTGATTTCTACAACAATCTGATTCCTGGGGAGTTCCCAACACATCTCCTCAATTGCTCCAAGTTGGAGTACCTAGACCTGTCTATGAACGACTTTGTTGGCAGCATCCCTCGTGACATTGGCAACTTATCTAATCTGCAGTTTCTTAACCTTGGTTACACCAATTTCTCTGGTGACATTCCTTCTAGCATTGGAAGTCTAAAGCAACTCACAAATCTTCAATTTCAGAACTGCCTATTGAATGGAACTATCCCCTCTGAGATTGGCAACTTGTCCAATCTTGAATTCTTGGATTTGTCATCTAACTCCATGTTCCCTCCTTCGAGGTTGCATGATAACTGGATGCGGTTGAGCAAGTTGAAGTTCTTTTTCATGTTTGACTGCAACTTGGTCGGGGAGATCCCTGAAACTATTGGAAACATGGTGGCTTTGGAGAGATTGGATCTATCGCAGAACGATTTAAGTGGTGAAATTCCCGGGGCCTTGTTCATGCTGAAGAATCTGAACATAATGTTTCTATCTAGAAACAAGCTTTCTGGGGAAATACCTGATGTGGTTGAAGCACTGAATTTGACCATCATTGATCTAACGCGAAATTCTCTCTCAGGAAAAATACCAGATGGTTTTGGAAAGCTTCAAAATTTAACTGGTTTGGCTTTGTCTTTAAATAACTTACATGGGGAGATACCACAGAGCATAGGCCTTCTTCCATCTCTGATAGATTTTAAAGTGTTTTCCAACAATTTATCAGGTACTCTTCCTCCTGACTTTGGCCGCCACTCAATGCTTAAAACCTTTTTGATTTCAAATAATAGTTTTAGTGGAAAGCTACCCGAGAACTTGTGCTATAATGGTCACTTGGAAAACTTAACTACCTATGAAAATCATCTTAGTGGGGAGTTGCCACAATCACTTGGTAATTGTAGTAGCCTGACAGATCTGAAAATTTATAGTAACGAGTTTTCTGGTAGCATTCCAAGTGGTCTTTGGACTTTCAATCTGTCAACTTTCATGGTGAGCCATAACAAGTTCACTGGTGAGCTTCCTGAGAGATTGTCCTCAACTATTTCGCGTTTGGAGATAGATTACAATCAGTTTTATGGTAGTATTCCAACTGGGGTGTCTTCATGGACTAATGTGGTTGTGTTTCAAGCCAGTAAGAACAACCTTAATGAGAGTATTCCAAGAGAGTTAACAGCTCTTCCAATGCTAACAACACTATTGCTTGATCAGAACCAGCTCACAGGACCACTTCCGTCTGATATAATATCATGGAAGTCCCTTAGGAATCTAAATTTGCGACAAAACCAACTCTCTGGACATATTCCTGATTCAATTGGTCATTTACCTGATCTCAACCAACTTGATCTGTCAGAAAATCAGTTCTCGGGTCAAATTCCTTCTCTTCCTTCCAGACTCACCAATCTCAATCTTTCCTCCAATTACTTGACAGGGAGGGTTCCAAGTACATTTGAAAATTCTGCTTTTGAAACCAGCTTTTTGAACAATTCTGACCTCTGTTCTGATACTCCAGCACTGAATCTCAGGTCATGTAATCATAGCCCTCAAAGTGAAAGCAATGACTCATCTTGGTCTGTTGCTTTGATCATAAGTCTGGTGGTAGTGGCCTGTTTCCTGGCTTTGTTGGCATCGTTCTTGATAATCAGATTTTACAGAAAAAAAAAGAGTGGATTGGATAGGTCATGGAAGCTCATTTCTTTCCAAAGGCTGAGTTTCACTGAATCAAACATAGTGTCATCACTCACAGAAAATAATATTATTGGCAGTGGTGGCTATGGTGCAGTATACCGCGCTGCAGTTGATGGTTTAGGCTATGTTGCTGTCAAGAAAATTTGGGACAACGAAAAGATAAACAAGAAGCTTGAGAGCTCATTTCACACTGAAGTTAAAATATTGAGCAGCATTCGTCACAAAAACATTGTGAAGTTGATGTGTTGTATCTCTAAAGAGGACTCTATGCTCCTTGTGTATGAGTATGTGGAAAACCACAGCCTTGACAGGTGGTTGCACAGGAAGAATAAGTCATCATCAGCTGTTTCAGGTTCACTCCATCGTGTTGCCCTTGATTGGCCAAAGAGATTGCATATAGCAATTGGAACTGCACAAGGTTTGAGCTACATGCATCATGATTGTTCGCCACCTATTGTTCATCGAGATGTGAAAACAAGCAACATTCTTTTGGATGATCAATTCAATGCAAAAGTTGCTGATTTTGGTTTGGCCAGGATCTTGGTGAAACCAGGGGAACTTGCCACCATGTCAGCTGTGATTGGATCATTTGGCTATATGGCTCCAGGTGAATGAAATGCCAAAATTTAGTTTCCTTCAAAGTAAACATAGCACAATACTTTGATACACTAACATGAGTACTGTTTAGGCCATTCTCTAATCAAAACTGTCAATTTATCAGTAATCATGTTAGAATTTTCATATCAACTAGGAATAAGATGAATTTATCGTATATACATGAATGTAAACCTTATCTTACAAATGATTTTTGCACACTTGAATTGCAGAGTATATCCAAACAACTCGAGTAAGTGAAAAGATTGATGTCTACAGCTTTGGGGTAATCCTATTGGAACTTACAACTGGCAAAGAAGCTAATTATGGTGATGAGCACTCATCTCTTGCAGAGTGGGCGTGGCGGCACCATCAATTAGGAAGCAACATAGAAGAGCTGCTAGACAAAGAAGTCGTGGAATCCAGTTACTCAGGTGAAATGTGTAAGGTTTTCACACTAGGTCTCATGTGCACTGAAACACTTCCTTCTGCTAGACCATCCATGAAAGAGGTTCTACAAGTTTTGCTTTCTTGTGATGAATCATTTTCTAAGGGAGAGAGTAATATTTGCCACTGTGATGATGTTGTTCCCTTTCTTAAAAATTCAAGAAGAGAGCACAAGTTGGATATTGATAATGATAGCTAG