Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17136 LG4 32359996 32360661 PREDICTED: ethylene-responsive transcription factor TINY
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, multidimensional cell growth
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/T 32360016 synonymous_variant p.Ser7Ser
C/T 32360075 missense_variant p.Ser27Leu
G/A 32360107 missense_variant p.Gly38Ser
G/T 32360216 missense_variant p.Arg74Leu
C/A 32360241 synonymous_variant p.Thr82Thr
A/C 32360461 missense_variant p.Ile156Leu
T/C 32360465 missense_variant p.Val157Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17136.1
MVDPAPSSESETRNAVSSASSPSSSSSSSKKRGRTNDGNGSSSNDSKHSVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALTIKGSSAILNFPELAASLPRPASNSPRDVQAAAAKAASMEAPPPRTPPSPAAAPEDDLGEIVELPPLGSIFDSPDPNTEFVFVDPDEGWPYPQPWCHGIYDGGYFIGDTNMVSMQESESMVLSLWP*


CDS Sequence:
>Vu_17136.1
ATGGTCGACCCGGCACCATCCTCAGAATCAGAGACCAGAAACGCCGTCAGTTCTGCTTCTTCGCCGTCATCGTCGTCGTCGAGTTCTAAGAAACGAGGAAGAACCAACGACGGCAATGGTAGTAGTAGTAACGACAGCAAGCATTCGGTGTACAGAGGAGTCAGAATGCGGACGTGGGGGAAATGGGTGTCGGAAATCCGCGAGCCGCGAAAAAAGAACCGAATCTGGCTCGGCACCTTCGCCACCGCCGAGATGGCGGCGCGTGCGCACGACGTGGCGGCGCTTACCATAAAGGGCTCCTCGGCCATCCTTAACTTCCCCGAACTCGCCGCCTCGCTGCCGCGCCCCGCCTCCAACTCCCCCCGCGACGTGCAGGCTGCGGCGGCCAAGGCCGCCTCCATGGAGGCGCCGCCTCCTCGGACCCCTCCCTCCCCCGCCGCAGCGCCGGAGGACGACCTCGGCGAGATTGTGGAGCTGCCGCCTCTGGGGTCCATCTTCGACTCGCCCGACCCGAATACGGAGTTCGTGTTCGTCGACCCGGATGAAGGGTGGCCCTATCCTCAACCGTGGTGTCACGGCATTTATGACGGTGGGTACTTCATCGGCGACACGAACATGGTTTCAATGCAAGAGTCAGAAAGCATGGTTCTTTCCTTATGGCCTTGA


Promoter Sequence:
>Vu_17136::LG4:32357996-32359996(+)
TTTTTTATGCACATAATTATCCTTTCTGCTTAATCATGCATTTGGTTTTCGTCGTAAACTTTTGTTCAATTGGAATAACTTCAAAACAAATTTAAAATTGGTAAAATTTTATAATTTTGTTGACAAGTTTAAACTTATAATAATAAGGTGAGTTGAAAAAAGTCTAAGCGATGATGTTTTAATAATATTTCTATTTTACTTGCGCAAAAACAAAACTCAAAAGTGGATATAATCACATTTCCAAATTCATCTTAATCCTAATTTTTAAATTAAAATATGCTTTTTAATTAATGTTTCGACAGGATTTAGAACCCTAATCCAAAACATTCAAAGTTGTCTACTCCGATGTGCAATTGTACTGTCTTCTCTCTTCTCTTTGTCTGAGCCGCGGGGGAGGAGTGACTTTGCGTAATAATCTTGTAATCAAGATTTAGGTATGATAGCTCTAAGTTTCAGTTCAAGTTCAAGTTACCTGTCCTTTTGACAGACAAATATTTATAAATTATAATGAGCATACCGTTAGGTCTGACTCATTAACCAACAATGAATGATAATACTACTTGTCAATAAATGACAATTATTTTCATTGATTCTCCGATATTATTACTATTGATTACCTTAACAGCTCTTTTTCCCGATCGGTTAGAGGTACCATCGGTAGGCCGACTCTCTTATACATTTTTACCGTTTGATCCGCTATAAGCCCATAGTAACAATTAAAATAAAGTCGAACTAAAATTAATACTCACAAATTTATAAGTTTAATTTTGTCTATAATGTAACATTTATTCAGCACAAAAAAAAATCTAGCAAAAGAATTCAAATTCTGAATTTCGATTCACACGAACAAAAGGAAATATACAGGAACAAAATTAAACTCCAAATTTACTTTCATTTTGTACGAAGCTTGTTCATCTTCTACGTATTGGTTCTATAACACTCCATAACAGTTCCTTATAGTTCTTAAAATCTCTCCCCAACCCCACCCTTCAATATATATATAATCTATAGTAATGTCACCGACATACTTTACATTATATTACTTTAATAACATGACATAATCCTAACTAATTCTGCACTTTAATCTAATTCCACCACCACACTAACAATTACGACTGTTTCCTTCTTCTTTTCTCTCAGAGGGGGACAAAAGACGTGGCTACATAGGATCGTCTTCGCGTATAATAATAATAATGTGAAACGTGTCATTAACAGTAGTAAAAGAGAGAAAGAAAAAAACATAGAATGGGACAATAACAGTATCCCTATACCACCAAAGGGTGATAGATAGGTGAAACGCAAAAACAAAACAACATAACTGATGTTTAACATTAGTTTTTGTTTCAGTGATTTTTACTGTCGCTTGTGATCTGGTTCTCCCCAGATACATACAAGAGAAAAATGAGATTATAAATATAAATATCAGGCATGGGATGAAAAAAAGTGCCAGGCTGTGTGGTGAGCTTCCTCCATCCTTCGGGAGCTGCAAAGAAATTAAGTATAAAAATGTAATGTTGGAAATCTAGAAATAAAGTAAATTTAGAATATACATGTTTAACTCAACTATACAAAATCATATCATTAGAAAATAGATTTTGATCCTTAATTCAACTTTATAAAATTAACAAGGTGAAATTTTTGTAATCGTCGACGTGAGACTTCCAACGTAAAATTTAAAATCTACTTTGTTAACCATACTTAAGGATGTTTATGTTTGTATTGAGGATAGATAAGCTTGTATGTTTGATGATGGGGTTTTGAAAGCAGAGCCATTCGTGTGGGTCTCTGGAGGGTCCTTGCTTACGTACATAACACCCCCACGTTTTCTTTTCTCTTCCCAATTAATTTCCTTCTACTAAAACCCCTCCTTACTCTCAAACTCTCTTCATCTCCTTTTCTCACTCTTTCATCACACTGTGTCACTGTCATAGGGACATTGTTACACATCAAGCAAAGAACAACAACAACAACGAACGAACAAGGTTCTATTCCTTAAACAA


Gene Sequence:
>Vu_17136(+)
ATGGTCGACCCGGCACCATCCTCAGAATCAGAGACCAGAAACGCCGTCAGTTCTGCTTCTTCGCCGTCATCGTCGTCGTCGAGTTCTAAGAAACGAGGAAGAACCAACGACGGCAATGGTAGTAGTAGTAACGACAGCAAGCATTCGGTGTACAGAGGAGTCAGAATGCGGACGTGGGGGAAATGGGTGTCGGAAATCCGCGAGCCGCGAAAAAAGAACCGAATCTGGCTCGGCACCTTCGCCACCGCCGAGATGGCGGCGCGTGCGCACGACGTGGCGGCGCTTACCATAAAGGGCTCCTCGGCCATCCTTAACTTCCCCGAACTCGCCGCCTCGCTGCCGCGCCCCGCCTCCAACTCCCCCCGCGACGTGCAGGCTGCGGCGGCCAAGGCCGCCTCCATGGAGGCGCCGCCTCCTCGGACCCCTCCCTCCCCCGCCGCAGCGCCGGAGGACGACCTCGGCGAGATTGTGGAGCTGCCGCCTCTGGGGTCCATCTTCGACTCGCCCGACCCGAATACGGAGTTCGTGTTCGTCGACCCGGATGAAGGGTGGCCCTATCCTCAACCGTGGTGTCACGGCATTTATGACGGTGGGTACTTCATCGGCGACACGAACATGGTTTCAATGCAAGAGTCAGAAAGCATGGTTCTTTCCTTATGGCCTTGA