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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17019 LG4 31340679 31341611 PREDICTED: ethylene-responsive transcription factor ERF119-like
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 31340753 missense_variant p.Val287Phe
A/T 31340798 missense_variant p.Phe272Ile
T/A 31340806 missense_variant p.Asp269Val
T/*,A 31341477 missense_variant p.Glu45Asp
A/C 31341554 missense_variant p.Ser20Ala
C/T 31341588 synonymous_variant p.Glu8Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17019.1
MECKRGKEKVPAKAKNVKTSRKIRIVYTDPDATDYSSQEEEEEEEDDDKLLRNGYEVSGCSKRVVKEILLPCMQSKLQEENSSQDVNSEKMKASPIDFSSGRMRKPSSVYKGVQRRKWGKYVAEIRDPIQGVRVWLGTFDTEQEAAMAYERKKNEFERSRKRDAVAFDSSKEVLFHASPSSVLDVCTTKASLDVSDLNDSVKENFNVEKVGEGGGTDVEVEPVNSEDNSTQLLLEEPVMASLFGYDGFYLDEAEKRGILLDNEFHNFLDNDFKGGFMWNVEHGEATVLPPVDSSFDELAWIDETLDWESS*


CDS Sequence:
>Vu_17019.1
ATGGAATGTAAGAGAGGAAAAGAGAAGGTTCCAGCCAAAGCAAAAAACGTAAAAACATCAAGGAAAATTAGAATTGTGTACACTGACCCTGATGCTACAGATTACTCAAGTCAAGAAGAAGAAGAAGAAGAAGAAGATGATGATAAGTTGTTGAGAAATGGCTATGAGGTAAGTGGTTGCTCCAAGCGGGTTGTGAAGGAAATCTTGCTTCCATGCATGCAAAGCAAGTTACAAGAAGAGAATTCATCACAAGATGTAAACAGTGAAAAGATGAAAGCAAGTCCAATCGATTTTTCAAGTGGGAGGATGAGGAAACCATCAAGCGTGTACAAAGGTGTTCAACGTAGGAAATGGGGGAAGTATGTAGCAGAAATCAGAGACCCTATTCAAGGGGTGAGAGTGTGGCTTGGTACATTTGATACCGAACAAGAGGCTGCCATGGCTTATGAGAGAAAGAAGAATGAGTTTGAAAGGTCGAGAAAAAGGGATGCAGTGGCTTTTGACAGTTCCAAAGAAGTGTTGTTTCATGCATCTCCATCGTCAGTGCTTGATGTCTGCACTACAAAAGCTTCACTAGATGTTAGTGATCTGAATGATTCAGTCAAAGAAAATTTCAATGTGGAAAAGGTTGGTGAAGGAGGAGGCACTGATGTGGAAGTGGAACCAGTCAACAGTGAAGATAATTCAACACAACTTTTGCTGGAGGAGCCAGTTATGGCATCATTGTTTGGATATGATGGTTTCTATTTGGATGAAGCAGAGAAAAGGGGAATTCTGCTTGATAATGAGTTTCATAATTTCTTGGACAATGACTTCAAAGGTGGTTTTATGTGGAATGTGGAACATGGGGAAGCCACTGTCCTTCCCCCTGTGGACAGTTCTTTTGATGAGTTAGCTTGGATTGATGAAACTCTAGATTGGGAAAGCTCGTGA


Promoter Sequence:
>Vu_17019::LG4:31341611-31343611(-)
CATGAATTAAATTAAAGTTTGATAAACGGATTTCAGTTACAGTTCTGCAAATGTAACCTTCCTTTTCGCAAATCTTAAAGCTGAGTCGTCAACAAAAGAAAAACAGAGAAAACCAGAAAAACAGAGAAAACCAGAAAGAGAAAAGAAGAAAGAAGGAATTTGTATTGACTGGACCCACCAATTTGTTTTCCTTTTTCTCATTTTCTATGATTTCATCTAAAAGGTTAGAAAATAAATACATACTTTGTTTTCTACTCACTAACGTTACAAAGTAGCTGAAGTTTCAATCTTCAACAAAACCAAATTAATTAACACTCACAGTTTTTAATAAAATATTAATGACTTTTTAATTTATTTCAAAATGAATTACATTGATGCTTATATTTACACTAATAACTTTTTTTTAAATCAATTTATTTCTTAAGAAAAAAGAAAACTTAGCATTTAATATAAACTATAAAAAATGTCTTAGTGACATGTGTTGGAAATTGATTTGCTTTGATTTTGTTGAAAATTTTCTATTTAAAACAAAACCTTAAAAATTCTAATGAACTATGTCAATGTAAAAGAAATAATTAATTTTATATAAGGGTTAAACAGTCTTATTAAGAATTGAAATGACAATAATATTTTAATAACTTTCCATAACAACTTAAAAAATAATATGTAATTATTTTATTGACCCATTTAAATTTATTTTGAAAAGATATTTTAAACAAATCAATTAAAAGCCATATGTGAAAATTGTAAAAAAAATTACAAAAAAGAAATTGTTAAAAAACATTTTCTAAGTTGAAATTAGTTTTTCTTTAAAATTTTGATTTAATTTAGTTATTTGTTTTTAGAATTGTGTGAATTATTTTAATTAAATTTGTTAAATTTATTTTAAGTTTAACGAGTTTTTTAATTAACATTAAAGAAAAATTGTGTTAAACAATATAAATAACTCAAATATTATTATAAAATATTAAATAAACTTAATAAAATTTAGTTAAAAAAACTAAATTAAAATATTTCTGAAATAAAAAAATTAAATTATATTAAAATTTTAAAAATACACTAATTCTATTTTTCACTCAAGAATAAAAACATATTTAATTTTTTTTACATAATTTTGTTATATGTTTCAATCATTTGAAAAGATGTAAGTTGAAGTGAACGGTGAAAAGGCGAAGAGAGAGCGTTGGGTGAGAGAAAGAGAAACAAGATTTTGAGCATCATTGTGGAGTCAAATTCAACATCAGTTACTTTCCAGCATGTCATCAGAAGCTGCTTCTTTGGTTTCCTTGTTGTATCCACAACAAACAAAATTCACAACTTCCAAACAAAAATATAATATAGACTCATTGGTATGTTACTTTTTGGTTACCTTAGACTTTCAAACGCTGCTTATTTATTACAACATTTGTTTCTACGTCCCCTTCACTTCCCCCTCCACACTCTATAGTAAATGCTTTCTGCACAAAACGGCATGAATCTCAATATCTGCTTTGAACCAGTTTCTCTGTGCTCTGTGCTTCCTTGAGTTTTCGCCTTTGCATGCAGCTCTGCTCACTCCATCAGTGATAACTTTTTTACCTGAGATTAAAAGATCAAAAGGGTATGTGAGTTCACCTTGGTATCTGTAATTTGGTGTCTGACAGGTTTTACGTTTTTTTTTTCGTATCATTTTTCACTCAGAAATGTTCATTTCTTTACCCCTTTAATGCAGGACTTATGTTTTTGGGTTTCAATGCTTTGGGGCTCTTATAGTTGATACAAGTAAGAGTTATTCATAGTTATTGTGCCACTTTTGGCTTCTGTACTACAAATTCTTGGTCATTCTGTTGTTTTATGTTTTATTTACTTTTTGTGTTTTGCTTCTTTTTGGTTCTGGTTTAGAATACTGCTAATAGTGATTTTACTATACTTGAATAGTATTATTACCTTTGGTGAAGTTTCGGTGAAGGATATTTGTTAAAAAAATATCAGGCATTCCAAGAGAAATTCGACAAAAAGGA


Gene Sequence:
>Vu_17019(-)
ATGGAATGTAAGAGAGGAAAAGAGAAGGTTCCAGCCAAAGCAAAAAACGTAAAAACATCAAGGAAAATTAGAATTGTGTACACTGACCCTGATGCTACAGATTACTCAAGTCAAGAAGAAGAAGAAGAAGAAGAAGATGATGATAAGTTGTTGAGAAATGGCTATGAGGTAAGTGGTTGCTCCAAGCGGGTTGTGAAGGAAATCTTGCTTCCATGCATGCAAAGCAAGTTACAAGAAGAGAATTCATCACAAGATGTAAACAGTGAAAAGATGAAAGCAAGTCCAATCGATTTTTCAAGTGGGAGGATGAGGAAACCATCAAGCGTGTACAAAGGTGTTCAACGTAGGAAATGGGGGAAGTATGTAGCAGAAATCAGAGACCCTATTCAAGGGGTGAGAGTGTGGCTTGGTACATTTGATACCGAACAAGAGGCTGCCATGGCTTATGAGAGAAAGAAGAATGAGTTTGAAAGGTCGAGAAAAAGGGATGCAGTGGCTTTTGACAGTTCCAAAGAAGTGTTGTTTCATGCATCTCCATCGTCAGTGCTTGATGTCTGCACTACAAAAGCTTCACTAGATGTTAGTGATCTGAATGATTCAGTCAAAGAAAATTTCAATGTGGAAAAGGTTGGTGAAGGAGGAGGCACTGATGTGGAAGTGGAACCAGTCAACAGTGAAGATAATTCAACACAACTTTTGCTGGAGGAGCCAGTTATGGCATCATTGTTTGGATATGATGGTTTCTATTTGGATGAAGCAGAGAAAAGGGGAATTCTGCTTGATAATGAGTTTCATAATTTCTTGGACAATGACTTCAAAGGTGGTTTTATGTGGAATGTGGAACATGGGGAAGCCACTGTCCTTCCCCCTGTGGACAGTTCTTTTGATGAGTTAGCTTGGATTGATGAAACTCTAGATTGGGAAAGCTCGTGA

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