Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17005 LG4 31217953 31219551 PREDICTED: transcription factor BEE 1-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of phenylpropanoid metabolic process, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, positive regulation of shade avoidance, regulation of transcription, DNA-templated, transcription, DNA-templated, regulation of phenylpropanoid metabolic process, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, transcription, DNA-templated, transcription, DNA-templated, regulation of phenylpropanoid metabolic process
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity, protein dimerization activity, protein binding, DNA binding, DNA-binding transcription factor activity, protein binding, protein binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/A 31218185 missense_variant p.Leu78His
A/T 31218240 synonymous_variant p.Ala96Ala
A/T 31218353 splice_region_variant&intron_variant
G/C 31218436 intron_variant
T/C 31218610 intron_variant
T/C 31218618 intron_variant
A/T 31218890 intron_variant
G/T 31219032 intron_variant
C/T 31219291 intron_variant
G/A 31219381 intron_variant
T/A 31219392 intron_variant
A/C 31219423 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17005.1
MAEFSENLQLQSIRPSSFPFLDIDPSMELINQFIGINQHVIDNSNLTMHNLMPFSCDTFLGPQEPEFPGNLEENFPALVHHVNHNALPVSLPIFQAENEIHEGKKRKSVDLPETSSANSTPAVSETGSKIKQSSGKGKRAKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRARASEAKELGRYKREGYGGVSCFQPSWPL*


CDS Sequence:
>Vu_17005.1
ATGGCTGAATTCTCAGAAAATTTGCAACTTCAAAGCATTAGACCCTCTTCTTTTCCATTCTTAGACATTGATCCAAGCATGGAACTCATAAACCAATTCATTGGGATCAACCAACATGTCATAGACAACTCAAACTTGACTATGCACAACTTGATGCCATTTTCCTGTGACACCTTCTTGGGCCCTCAAGAACCTGAGTTTCCGGGAAACTTGGAGGAAAATTTCCCTGCCCTTGTTCATCATGTCAACCACAATGCACTTCCTGTTTCCCTCCCCATTTTCCAAGCAGAAAATGAGATCCACGAAGGTAAAAAGAGGAAATCGGTGGATCTTCCAGAGACCAGTTCAGCTAACTCAACTCCTGCAGTTTCTGAGACTGGAAGCAAGATAAAACAAAGTTCTGGAAAAGGAAAGAGAGCAAAAAGCAATGTGACAGAAGAAGAGAAAGCAAAGGAAGTGGTCCATGTGAGAGCCAGAAGAGGTCAAGCTACCGATAGTCACAGTTTAGCAGAAAGGGTGAGAAGAGGGAAAATCAATGAGAAATTAAGGTGCTTACAGAATATTGTTCCAGGATGTTACAAGACCATGGGTATGGCAGTAATGTTGGACGAAATCATAAACTATGTGCAGTCCCTGCAGCATCAAGTAGAGTTCCTTTCTCTGAAGCTTACTGCAGCAAGCACCTTTTATGACTTCAATTCCGAGACAGATGCTTTAGAAACAATGCAGAGAGCAAGAGCATCAGAGGCAAAAGAGTTAGGGAGGTATAAGAGAGAAGGGTATGGAGGAGTTTCTTGCTTTCAACCAAGTTGGCCACTTTGA


Promoter Sequence:
>Vu_17005::LG4:31215953-31217953(+)
TTAGGTTGGTTGATAGATTGACCAAACACAGTGTGCTAATGTGACTTGTTCACTAAGAAAACTATTGTTTCGTCCTTTTCTCACACATTGATGTTGGCGAGTTAATGGGTCTATACCCTCTCGTCCATTACGTAACAAGAACACTTTTAATGGGGTGGAGCAAAGGTTCATGGTACTGAATATAAAGCACCATGCTTATGTGGCCTCAAGTATGGACAAAGCAGAAGAACAAGTTGCAGAAAAGATCGCACTCTAACAATGACAGTTTCTGTGCACAGTATACATCACAACATACACCATTTGAAAAGTTGAGTTCACCATGGTTAATGCTTGTAATGGGGTGCAAAACTAAGTGACAATCTTTCTAGGCTGCTTTTTCCTCCTTCGTTAATTTTATCCAATTTATACTTTAACTATATACAAATTTACTTTTGATTTTACTCTTTGAAAAAAAAATAGGAAACAAATAATGAAATCCAAAAAGGTAGTCTAGTATGGTGATATTAAATTCAATAATATGATATGTGACCATTTAATGAATTTGAGATCGATCTCCACATTATTTTAGAATTTGAGATATAAATTTAATTTTAAAGAGTAGATAATAGAGTATTAAAAAGTATATACGTGGGTATTAATTAATGGGATAAGATATTAATTTACTCAATTTATCTTAACTCATCTTTAATTAAATTTAATTCAATTAGTAATGTTTAAATGATTAAATATTTTAATATTTTAAGAGATACATTTAGTTAATATAATTATAATAATGAAATAATTATATTGATATTATTACTAATGTTAATATTATTTAAAATTTTAGTTGAGTTAGATACCAGGTGGTAACTCAACAACCAGAAGATTTTATTAAATTTGACTCAATTGAAAACACAACTCAACTTCTTTGAGTTAATTTTATTCCTCGTATTATCTGATGCAAACACTCTTACACTATTAATCTTCATTTACATTAATGATATTTTGACCTGTTTACTGTTTTATATGATTATTATTCAGCTAAATATATTATTCTTTTATTTTAAAATTTTCTTTATATATATTTTATTACCATCATCTCAATATATTACTTTATTATTTAAAAAAAGTTATTACGTAGTTATTTTGAAAAAAATATTAATAATTTCACGGAAGAAATTCTCGTACACATACAGATACTAGGTAGTGAACAGTGACGTAGGTACAATCGATTTGATTGGTACAATTTTCTTTGGAATGGACAATACTGTATAGTGAAATAATTAATCACATTTGTATATATATTTTTCTTTATTTATATAATTTTTGTCTAACTAGATAACAAAAATAATTATTAGATTGTTTATTCTCACAAGACATTTTAAAATATTTTTTCGTTAAATAATAATACATAAAACAATAGATTTTAGATTTAATTCAATGTTATAAGATGAAGTAACTTTATCTAAGTTGTAATATAAAATGTCAAACCAAAATGAAATCATTGAATGCATCAAACTTTTGTTAATGATCTTAGGTTTGAATGTTAAGAAAATGGTTTGTTTATAATGTTGTGAATATGAGAAGATGAGTCAGAAAAAAGGAAAATGGAAGTTATGGTGGTGACATAGAATAAGGAAGAAGAAGAAAGGTGATATATTTTGGAAGATTTAGCACCAAAGGCATGCTTCCCCACTAAAGAAGTGCACTTTTCAAATTCCCACTAGAGCTAAAAATTGAAATTAAAAAGTCTAAAAGGTCCAAAACTAGGCGTGCTTTTCTCACAAAAACATGGGTCCTTATTGATATTGGACATTTTTCCCTGTGCAAGGGGCCAACTAAGGGAACAAAAACTACAGAAGCTTGAGGTGCCACGTGGCCACCTAAGAATAGCTTCTATTCACCAATGTAGCCACAATTCCACAGTATAAATACAACAAGTGTAACCCACATTATCCAAATACCACTTAAACATCTCATAAACACTCACTCACTCTCTCATTCTGTGATATATAATCACA


Gene Sequence:
>Vu_17005(+)
ATGGCTGAATTCTCAGAAAATTTGCAACTTCAAAGCATTAGACCCTCTTCTTTTCCATTCTTAGACATTGATCCAAGCATGGAACTCATAAACCAATTCATTGGGATCAACCAACATGTCATAGACAACTCAAACTTGACTATGCACAACTTGATGCCATTTTCCTGTGACACCTTCTTGGGCCCTCAAGAACCTGAGTTTCCGGGAAACTTGGAGGAAAATTTCCCTGCCCTTGTTCATCATGTCAACCACAATGCACTTCCTGTTTCCCTCCCCATTTTCCAAGCAGAAAATGAGATCCACGAAGGTAAAAAGAGGAAATCGGTGGATCTTCCAGAGACCAGTTCAGCTAACTCAACTCCTGCAGTTTCTGAGACTGGAAGCAAGATAAAACAAGTAAATTTTTCTTCTTTTTTCACTTCTCTTCCCCATGCATGTGTTGGATAATAATTTGTTTGAAAATATATATGCAAGAGCAAGACTGAGTTTGGTTTTTGTTTTCTGAATAATTTCAGAGTTCTGGAAAAGGAAAGAGAGCAAAAAGCAATGTGACAGAAGAAGAGAAAGCAAAGGAAGTGGTCCATGTGAGAGCCAGAAGAGGTCAAGCTACCGATAGTCACAGTTTAGCAGAAAGGGTGTGTATATATATAATTCCTATTTCACTTTCTTCGAACCAAGAAAGAATTGTTAAATACCAACACAAGTTAAAAAACAAATGAAACAATCAAATAACATATTCAATCTCACTTTGGCTACTTTTGTTGTCTGTTTGATGGTGTTGAACGTGGACTGATGCATATTTGTATACCATTTATTGTTGTTCAGGTGAGAAGAGGGAAAATCAATGAGAAATTAAGGTGCTTACAGAATATTGTTCCAGGATGTTACAAGGTAGAGACATGTTTCCTTCAAAAGCTCCAATCTGTGTGCAACTTCAAGAACCAAACTCTCATATTTCAACTTTTAAATTAATGTTTGCAGACCATGGGTATGGCAGTAATGTTGGACGAAATCATAAACTATGTGCAGTCCCTGCAGCATCAAGTAGAGGTAAGTGATCAAAATTTCTTTTAGAAAAAGATGGTGTTCATTTGTTGTTAGAAAAGATACTTTTATGTTTCAACATAGCCTTACTAATATTGATAGCAATCCACGTTTGGCTTTTTTGCAGTTCCTTTCTCTGAAGCTTACTGCAGCAAGCACCTTTTATGACTTCAATTCCGAGACAGATGCTTTAGAAACAATGCAGGTACCTACTTCTAAAGTTTTCAAGGTCTTATTTAATGTTAAATAAAGCTTTGTGTTGCTTTAACGAAAGCTCCTTTTTTGGATGACAACCTCTTAATTCAAGGTATTTAATTAATAAGCATGAAAACCTCTTAATTCATGTATGTGCAAACTGTTTGGATGGATAAGAATGAATCTAAGGGTAGTTTGTGTCACTGAATGATCAAATTCAAAGTATATTATATTATATTCATGTTGAGTTTTTTTAATTTGTGGCAGAGAGCAAGAGCATCAGAGGCAAAAGAGTTAGGGAGGTATAAGAGAGAAGGGTATGGAGGAGTTTCTTGCTTTCAACCAAGTTGGCCACTTTGA