Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17002 LG4 31194865 31198323 PREDICTED: putative receptor-like protein kinase At4g00960
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/C 31195053 missense_variant p.Asn27Thr
T/C 31195275 upstream_gene_variant
T/A 31195331 synonymous_variant p.Val77Val
T/C 31195339 missense_variant p.Leu80Pro
A/G 31195342 missense_variant p.Asn81Ser
C/T 31195395 upstream_gene_variant
G/A 31195415 upstream_gene_variant
A/G 31195470 upstream_gene_variant
A/T 31195549 upstream_gene_variant
T/C 31195566 upstream_gene_variant
G/A 31195643 upstream_gene_variant
G/A 31195703 upstream_gene_variant
G/A 31195734 upstream_gene_variant
G/A 31195738 upstream_gene_variant
T/C 31196043 downstream_gene_variant
T/C 31196072 downstream_gene_variant
C/A 31196073 downstream_gene_variant
G/A 31196349 downstream_gene_variant
T/A 31196360 downstream_gene_variant
T/A 31196364 downstream_gene_variant
T/A 31196418 downstream_gene_variant
G/A 31196567 downstream_gene_variant
A/C 31196597 downstream_gene_variant
A/C 31196599 downstream_gene_variant
T/A 31196600 downstream_gene_variant
T/A 31196745 downstream_gene_variant
C/G 31196759 downstream_gene_variant
T/G 31196766 downstream_gene_variant
C/A 31196950 downstream_gene_variant
G/T 31196970 downstream_gene_variant
T/C 31197030 downstream_gene_variant
A/T 31197049 downstream_gene_variant
G/T 31197066 downstream_gene_variant
A/T 31197070 downstream_gene_variant
C/A 31197073 downstream_gene_variant
A/T 31197113 downstream_gene_variant
C/T 31197120 downstream_gene_variant
A/T 31197273 downstream_gene_variant
T/A 31197280 downstream_gene_variant
G/A 31197316 downstream_gene_variant
T/G 31197335 downstream_gene_variant
A/T 31197353 downstream_gene_variant
T/A 31197442 downstream_gene_variant
T/G 31197446 downstream_gene_variant
T/C 31197573 downstream_gene_variant
T/A 31197590 downstream_gene_variant
A/G 31197595 downstream_gene_variant
A/G 31197657 downstream_gene_variant
C/T 31197658 downstream_gene_variant
T/C 31197698 downstream_gene_variant
T/C 31197727 downstream_gene_variant
C/A 31197766 downstream_gene_variant
C/G 31197878 downstream_gene_variant
A/G 31197905 downstream_gene_variant
A/T 31198195 missense_variant p.Thr210Ser
T/A 31198209 synonymous_variant p.Ala214Ala
G/C 31198270 missense_variant p.Glu235Gln
A/T 31198271 missense_variant p.Glu235Val
T/A 31198276 missense_variant p.Tyr237Asn
T/A 31198281 synonymous_variant p.Ser238Ser
T/A 31198302 synonymous_variant p.Ser245Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17002.1
MGCGREHETLCPCFCKGAATSGDGGDQHDDHSGPADSLDLIFDLHTLQLATNFFSSLNQLGHGGFGPVFKICDFSSLVPVLNHDGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNQDMRLGPEKADLLSYAWSLYQGGRIMELIDPTLGKYNGDEAAMCIQLGLLCCQASIIERPDMNAVHLMISSDSFTLPRPGKPGIQGRTGRWTTTTSALTNTNASNTTRVSGGSGSFVEDYSRNSISTSSFDEGR*


CDS Sequence:
>Vu_17002.1
ATGGGTTGCGGAAGGGAACATGAAACGCTGTGCCCCTGTTTCTGCAAGGGAGCCGCAACCTCCGGCGACGGCGGCGACCAACACGACGATCACAGCGGGCCGGCGGACTCCTTGGACCTGATTTTCGACCTCCACACTCTCCAACTCGCTACCAACTTCTTCAGCAGCCTCAACCAGCTAGGTCATGGAGGCTTTGGCCCTGTCTTCAAGATTTGTGATTTTAGTTCCCTGGTTCCGGTTCTCAATCACGATGGTTACATGGCTCCTGAATATGCATTGCGAGGATATCTGTCAGTGAAGACGGATGTTTTCAGTTATGGAGTCCTGGTGTTGGAAATAGTTAGTGGGAGAAAAAACCAAGATATGCGACTTGGACCAGAAAAAGCAGATCTCTTGAGCTATGCATGGTCGCTTTATCAAGGAGGGAGAATAATGGAATTGATTGATCCAACCCTCGGCAAATACAATGGTGATGAGGCAGCAATGTGCATTCAGCTAGGTTTGTTGTGCTGCCAAGCAAGCATAATTGAAAGACCTGACATGAATGCTGTTCATCTCATGATCTCAAGTGATTCCTTCACTTTGCCAAGACCAGGTAAACCTGGAATTCAAGGTCGTACAGGACGTTGGACCACAACTACATCTGCTTTGACCAATACCAATGCTAGTAACACTACCAGGGTCTCAGGTGGTAGTGGTAGTTTTGTAGAGGATTATTCTAGAAATTCTATATCTACCTCTTCTTTTGATGAAGGCAGATGA


Promoter Sequence:
>Vu_17002::LG4:31192865-31194865(+)
TAATTTTATAATGTAAATTAGTTTTTAAAGATTGAATTAAATTTAAAATTTACTTTTTAATATAATATTAAAATTATCTGAAATTCATATAATACAGTGATATTTGATGTCTGTTAAATCTATTATTTTATATGATTATTATTAATATTTATTTTCATATATATTTGAAGATAAAGAAATGTGTTCATTCTAAGTCTTAAAACTGACTTAAATTCAAAATTTATTATATATATATATATATATAAAAATATAAATAAATGCTAATTTTATAATGTAAATTAGTTTTTAAAGATTGAATTAAATTTAAAATTTAATTTTTAATATAATATTAAAATTATCTGAAATTCATATAATACGGTGATATCTGATGTCTGTTAAATCTATTATTTTATATGATTATTATTAATATTTATTCTCATATATATTTGAAGATAAAGAAATGTGTTCATTCTACAAGTCTTAAAATTGACTTAAATTTAAAATTTATTATATATATATATATATATATATATATATATATATATTCTTTTTAATTCCAATTCCAAAACCAGCACATTTTGAACATAAAAAAAATTGACTCTGAAAAATTCTTATTCTTTGTTTTTATTAATGATGTGTGGTCCATGGAGTACAGCAATAAAGAAATACCAAAGAGATGAGGGAAAGAAGAAGGAGAATTGTATACAACTTGGTGTTAAAAATATCTTTACAAGAAAAAATGTACCCACGAACTTGTTGACCAAACGAGTGTGTTCATAATTTAATTATATTTCCAAAATTGCAATTAGAGGATCGAGACATAGCCTAAATAGCATTATTTCATCTACTAATAAACTTAATCATGGCATTAAGAATCATCGCTTTGGAAGTTCAAGCTTCAATGGTCAACATCGTGAAAGTCAATCAATTCATTTAATTTGATCTTCCCTCCAAGAATCTTTAATATTTTCTTAAATTATATTTACATATTCTAAAACCACACTATCCACCAAATGATGTCTTTTATAAAAAAATGACAAAAACACCATTTCAAAATAAAAATCTTTGTATTATATTACATACTTTACATATCAATAAAATTTATATTCTCATCTCATGTTTTTGACAAAATGCTAAAATAATATAATCTTTTTTGTAAATAAAGAAAATACAAAAACAAATAAATCATATTAACTTCATATAATTTTATTGTGAAGAAATCGTGTTAAATGAAAATATATTGTATATGACGGAAGACCTATCAATTCAGTCAATCGAGATTTATAGTTTAGATATAAAAATACTTTGAAAAAGACGATATTAGATGTCAATAATTGAGTATTGAACTTTGAGTTTCACGTCAATAGATCTATATAAGTTGTAACTCATTTGAATAGATTTATTATTAACAAAGTAAACACTATAAATAGTGTATTAATGATAATTTATAATTATTTTTTTGTATTAATTGAAATTTTACTATAGAGTTTTGATCAAATGTTAACTTAGAAAATCTTTTAAAATATTTTCAATAATTAAAAGAAAAATTACAACATGGTGCATTTCCAATATTTTGCCATCCTACGTGAAAAGTTGTAAAGAGTAATGTTAAGTAATTTCTTCTCAAAGTACTCATAACATTGTGAGAAGTAGGAAAAAAATTGTACTCACTTTCCTTTGAGGTTTTCTTGTTTCTATGTAAAGATTTTGAACAGAGGAACAGTAATAATGACTTGGAAGACAATTGAGGGAAATTGCCGTGTTTGACTGACTCAACATTATCATCATTAAAAAAAGATGATCTATTAAAGTTAGGACAACTGGAATCATAAAATCGCAGACCTGCAACGTTCCAATTAAGTTTATACGTACAAAGAAATTCCCATTTTTTTTTCTTATAATTTTATATTCAAATAAATGAAAATTACATTATTATCTACATTTTCATTTATTTTACTTAACTATATATAGAATATTTTTCGTTATATGAAAAACGTCATAATAAAACAGAGAGAGATAGA


Gene Sequence:
>Vu_17002(+)
ATGGGTTGCGGAAGGGAACATGAAACGTTGCACTGAGAGGACTCATGACCGGACAGCATAGTCAACTATATAGTCAGTGCTGCCACCTTGGAAATCGCGATTAACAACGTTGTTCTCATGTCCTTTTTCTCCAGGCTGTGCCCCTGTTTCTGCAAGGGAGCCGCAACCTCCGGCGACGGCGGCGACCAACACGACGATCACAGCGGGCCGGCGGACTCCTTGGACCTGATTTTCGACCTCCACACTCTCCAACTCGCTACCAACTTCTTCAGCAGCCTCAACCAGCTAGGTCATGGAGGCTTTGGCCCTGTCTTCAAGGTACCATACCCCTTTCTCCTCTTCAAATTTCCAAACCTAATTAGTTGCTTCATCACGATAAAATTTTCACATTGAGTCCTGGGTTCTTGCCATTTTAATATTAATTATACGTTCTGGTATAGTAGATTTGTGATTTTAGTTCCCTGGTTCCGGTTCTCAATCACGAGTCAGTGGCTGATCAATAAATTCCAACCTGTAGAAAAATTAAATCACACAAGTACAAAAACTTTAAGAATTGGATTGACATAATTGTAATCTTAAAGTATGAAATCTGTATTAACTGTGGAAGATCTTGTTGGCACACGTGGGACTAAGGAACTAAAATAGTTACTGATTTGTAAAATCTCAATAATAAAAATACAATTCACAAACCAAAATACGAGTGATTTACCAAATTTCACCTTCAAATCAATTCTAAAAATATTTAGTAATTATTTTTCTCACCAGGTTATGCCCCTCGGACGAAAAAGCCAATTCACAAACCAGAGTGGGATGAAAAAACGATTAAAATCTTACTGTAGTACTAAAATATATGAAAAATGTACTGAATGGATTGTGTTTTCAATTAACTATAACTCTATATATAATTTTAAAATACTTGTTGCACAAGGCAATGGTTTTATCATGGTAATTTATGATTATAAAAAATGTTTTCAGTTTGGTTGCATTCTAGTTCTGGTTAAATTCTTAAAAATTATGAATTCTTATAAAAGTGTCGTTTTAGATTTTAGTTACTGTATGACCAAAGATCAGTCACGAGACAGTAGTCCTTATTGTTGAAATTTCAGGGCTAAAACGACCCTGGTCATTTGATAAGTTTATAGACTAAAATGGCGTTTTTTGCTTGATTAGGAAGCAAATTAATCAGTAAGATTACTGAAGTATTATTTCAAGTCAATTACTAAATATACCCTTTTTCAATTTTTCGGAGAAGGACGATTTAATTAATTAATTATATTTTGCATGCTTTGTGCAGGGAATGATGCCAAATGGTCAAGAAGTGGCGGTTAAGAAGCTGTCATTGGAATCTAGGCAAGGAGTTAAAGAATTCACCAACGAAGTCAGGCTATTACTCAGAATTCAGCACAAGAACTTGGTTACATTACTTGGTTGTTGTGCAGAAGGGCCTGAAAAGATGCTTGTCTATGAGTATCTACCTAACAAAAGTCTTGATCACTTTCTGTTTGGTATTGAAAAGAGATGTTTCTTCATCTATTTTCTTACTTTTGTTTTGTTGTTGCTTGTAGAAAATGATTGACAAAAGTTGTAAGACAATTTTTTTCAGATAAGAGGAAGTCTTCATCTTTGGACTGGGCAAAACGATTCAGAATAGTTACTGGTGTGGCAAGAGGACTTCTCTACCTGCATGAAGAGGCACCAGAAAGAATTATACACAGGGACATTAAAGCTAGTAACATATTGTTGGATGACAAGTTAATTCCGAAAATTTCAGACTTTGGTTTGGCAAGGTTGTTTCCTGGGGAGGACACTCACGTACAGACATTTAAGATTTCCGGTACACAGTGAGTAGACTCTTCCCTTCTTGGTGCTTGTCATTCAGATGTTGGTATCCTTACACTTTATATTTGATGAATGCAGTGGTTACATGGCTCCTGAATATGCATTGCGAGGATATCTGTCAGTGAAGACGGATGTTTTCAGTTATGGAGTCCTGGTGTTGGAAATAGTTAGTGGGAGAAAAAACCAAGATATGCGACTTGGACCAGAAAAAGCAGATCTCTTGAGCTATGTAAGTTGATCAGATTGCAGACATTAATGCAAATTTAGTATGGACAACTTATGCTCATGGACTTAGATTCTTGTTATAGTTTAATTAACGTACATATTTTTTACCAAGAAAAAGGCATATTTTCTAAGCTTGTGCGGACGCTTTTAATAAAATGGAAAACTGTTGTGTCATTACATTAGTAATGATGCTTGTTCTTGATATTCACTCGTATATGTTAAGGTTACCCAAACAAGCATGCTTCTGAATTAATTCTGTGACACAACTGCTTCCACTAGTCTTTCTCTACTACCATGTATGTTTAAGGGTGAACTTTCGGATAATGTAAACTGGGTTGGTCACAACTCTAGTCACAAATTAAGCTCTCTCCCCCTACATGGATTGAAGTAGCATAGATTTAACCCTTTCTACCTTGAATCCAGAATAGTGGAGTCATGTCCACCAGAACACTCTTGTGTTAAAATTTATCTTATTCGATGATCAAGGTACAAATTTCAAATGAGTTTGAGGTATGGATAAAGGTCACATGCCGGTAATCCCTACTTTATGTTCTTGATAAGCCAATATTTCCTTTTACCAACTTTTGTCGGGGAAGTGATTGTGATTATGATCATATTTCATTTGACGTTGATTTGTTTGCCAGTTTTGCTATTTTTTTATTATGTATTATGATCCGATGTGACTGGGAACCGTTTGTTATGGGTTCTAACCTCACCGTGACTACTGTACACACAAAAAGACGTCGTTGATACTCGGCAATCGTATGATTTGGTTTGTCTTTGCTGGTAAACTGTAAATTTTTTGTATTGAAATGGCATCATAGAGCATCTAAGAAACTCTTTCTGGTGAAATCTAACGTATGAAACTGGAGAACAAAAAATATGGGACCGTGACATGTATAGTCCCTGTTATTTGACTTAAGTGGTCAAAGGGAATTAACATGAATTTCAAAACATACACTCAAACCAATCATTAAGAAAAATAATGTGACCATTTCATTCACACTTGTTCATTTTCTTCATTGAATTTTGTAGGCATGGTCGCTTTATCAAGGAGGGAGAATAATGGAATTGATTGATCCAACCCTCGGCAAATACAATGGTGATGAGGCAGCAATGTGCATTCAGCTAGGTTTGTTGTGCTGCCAAGCAAGCATAATTGAAAGACCTGACATGAATGCTGTTCATCTCATGATCTCAAGTGATTCCTTCACTTTGCCAAGACCAGGTAAACCTGGAATTCAAGGTCGTACAGGACGTTGGACCACAACTACATCTGCTTTGACCAATACCAATGCTAGTAACACTACCAGGGTCTCAGGTGGTAGTGGTAGTTTTGTAGAGGATTATTCTAGAAATTCTATATCTACCTCTTCTTTTGATGAAGGCAGATGA