Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16981 LG4 30935306 30937849 probable receptor-like protein kinase At5g20050 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 30935528 missense_variant p.Val501Ile
G/T 30935572 missense_variant p.Pro486Gln
T/C 30935624 missense_variant p.Lys469Glu
G/A 30936248 intron_variant
A/T 30936378 intron_variant
A/T 30936424 intron_variant
T/A 30936564 intron_variant
A/G 30936569 intron_variant
T/A,* 30936588 intron_variant
C/A 30936610 intron_variant
G/A 30936624 intron_variant
A/T 30936651 intron_variant
T/C 30936669 missense_variant p.Asn272Asp
A/G 30936679 synonymous_variant p.Asn268Asn
G/A 30936698 missense_variant p.Ala262Val
T/A 30936862 missense_variant p.Gln207His
C/T 30936869 stop_retained_variant p.Ter205Ter
C/T 30937432 synonymous_variant p.Gln80Gln
T/C 30937437 missense_variant p.Arg79Gly
G/A 30937508 intron_variant
A/G 30937513 intron_variant
G/A 30937525 intron_variant
C/T 30937526 intron_variant
C/T 30937552 intron_variant
G/A 30937664 synonymous_variant p.Tyr62Tyr
C/A 30937695 missense_variant p.Gly52Val
A/T 30937700 synonymous_variant p.Gly50Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16981.1
MRFRWDLFQCCFPSTSSDTFQKRSNLKWPIIPYKEIEKATNNFDQSRHLGSGERKKGFISQYYGTLEDGREITIQRFTEDRRYILQQFINETVILNYLPHKNIVSIYGCTSHREEPLLVHEYLSSGNLAAHFRDGVPVDTTHVTSDRVGSSGYIDPEYLTKGQLSVKIDVYSFGVVLCELLSSKLSIFHIMNEEDNLNTLLSRKIENKTLVELFDPRLGFQSNLNIKQLMTATAELAVLCMKCPQESRPNMEQVLEILNEMKQGRYVTISHSTKALKIFHHAELEEATNNFGTCLGKGGYGSVYYGKLKDGLEVAIKCFHDENETEETIKQFMKESDILGLLHHQNLVSLYGRTSRHCKKHMLVYEYISNGTLSKHLHESSGDKLPWQTRLNIAIETATALVFLHDSSVIHRDVKGSNILLDENFTVKVADFGFSRSLPDHVTHVTTIPVGTRAYIDPDYYISGRVSNKSDVYSFGVVLFELISSIHPSLVAGTDNETLAQFAKRKILNNELNEIVDESFSCGSDDNILEMISAVAELAFQCVQCPKEFRPSMKQVLETLEGISKGKWGFNQMT*


CDS Sequence:
>Vu_16981.1
ATGAGATTTAGGTGGGATCTCTTTCAGTGCTGCTTCCCTAGCACATCTTCTGACACATTTCAAAAGCGCAGTAACTTGAAGTGGCCAATCATTCCCTACAAGGAAATTGAAAAGGCCACAAATAATTTTGATCAATCTCGTCATCTTGGTAGTGGAGAAAGAAAGAAAGGCTTTATCAGTCAGTACTACGGAACACTTGAGGATGGACGTGAGATTACAATCCAGCGCTTTACAGAAGACAGGCGCTACATATTGCAACAGTTTATCAATGAAACTGTTATCCTAAATTACTTACCTCACAAAAATATTGTGTCAATTTACGGATGTACTTCTCATCGTGAGGAACCTCTGCTCGTGCATGAATACCTATCCAGTGGAAATCTTGCTGCACATTTTCGAGATGGAGTTCCTGTTGACACCACCCATGTTACTAGTGATAGAGTAGGTTCAAGTGGTTATATAGACCCAGAGTATTTGACAAAAGGCCAGCTTAGTGTGAAAATTGATGTTTATAGCTTTGGAGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTTTCAATATTCCATATTATGAATGAGGAGGATAATCTTAATACCCTTTTAAGCAGAAAAATTGAAAACAAAACTTTGGTGGAGCTGTTTGATCCAAGACTTGGGTTCCAATCAAACCTTAACATCAAGCAGTTGATGACTGCTACAGCTGAGCTCGCAGTTCTCTGTATGAAATGTCCACAAGAATCGAGGCCAAACATGGAACAGGTGCTAGAGATTCTCAATGAAATGAAGCAAGGGAGATATGTAACAATCTCTCACTCAACTAAAGCTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACTAACAATTTTGGCACCTGCCTTGGTAAGGGAGGGTATGGCAGCGTATACTATGGAAAACTTAAAGATGGACTAGAGGTTGCAATAAAATGTTTCCATGACGAGAATGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAATCTGATATCTTAGGTCTCTTGCACCACCAAAATCTGGTCTCACTCTATGGCCGCACTTCTCGCCATTGCAAGAAACACATGCTAGTGTATGAGTACATCTCCAATGGCACACTTTCCAAACATCTTCATGAGTCTTCCGGTGATAAACTACCATGGCAAACTAGATTGAATATTGCCATTGAAACTGCAACTGCATTGGTATTTCTTCATGACTCAAGTGTCATCCACCGTGATGTGAAAGGGAGTAACATTCTGTTGGATGAAAATTTTACTGTTAAAGTTGCTGATTTTGGATTCTCACGGTCTCTTCCAGATCATGTTACTCATGTTACAACTATTCCAGTAGGAACTCGTGCTTATATAGATCCTGACTACTATATATCTGGAAGGGTCAGTAACAAAAGTGATGTATATAGTTTTGGAGTGGTCTTGTTTGAACTCATATCATCTATCCACCCAAGTTTGGTTGCAGGCACAGATAATGAGACTCTGGCACAGTTTGCAAAGAGAAAAATCTTGAACAATGAATTAAACGAGATAGTTGATGAAAGCTTTTCCTGTGGTTCTGACGATAACATTTTGGAAATGATATCAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAGTTCAGACCATCCATGAAACAGGTGCTAGAGACCTTGGAAGGCATAAGTAAAGGAAAATGGGGATTCAACCAGATGACGTAG


Promoter Sequence:
>Vu_16981::LG4:30937849-30939849(-)
TATCAAACGATAAAGATGATGAGATTTATTCATTAATCCTTGCAAGATACTCCTGTGGTGATTGAAAATAAGCCAATCTCGCAATCATTTCCATTTCATTTTTGAAGATCTTTGAAAGTGAATATAATTTTTTTTAAGAAAATAGTGATTAGTCGTAATGTGGTGTTGGATGAGGGTCTGTTTTCGGAATTACTGTAGTTTCAACATGTATATATTCCCATATATATTACACTTTCAATAATCTTTTCCTTCATTTGTTCAGAGCCATATTCTTCATGCACATTTTGTTGTTGGCAGGAAAAAACACTATCACCATTAAAATATCCAAGTTTACTAGACAAAGGCTGATATAACAGACAAACTCTTTATATAGATGGTTATATCTCTAAGATTGTAAGAACAGAAAACAAAAATATAGCAACAAATAGGATTGGGAATGCAAACTAATATTTGTTGCCAAAAAATCTCACCATAACTCGGATTAAAACCCAGATGAAAGAAAAACAAAAAGTGCAAAGACAAATTCATGCTTATTCATTAGTGTTTCACATACACTTTCATAGGTTGAAACAAGGTCCAAGAGCTTATAGAGAGCTAGAAAATCATTTGTTAAGGATTGATTTTAAAAAGATGTAAAATCAATGCTTATGTGTGATAGATTTTAAATTTATATCAAAAGATAGATTTTTCTGAGTTTTATTTTGATACAAAGGTACAAAGAATTTTGTTTTTGGCAATTGAAAATAATATTTTATTAAAATTTTGTCTTTTTCCTTGACGCGTACTAATGGATAACGGATAACAGCTAACAATATATTTTTGAAAACATTTTTCTTTGCTCATTTTACTAATTAAAAGTTATTTAAAACTATAAAATTATAAGTAAAATTTATCTAATAAAATATAAAATCTTATCGTTTATGACAAAAGGATTGCTTTTATAACCAATTTTTTTTTTCTTTCATAGTATTATGAATACAATTGAATTGAGTTTTTTAAATAAGATTTTATTTTTTGTGAACAAAAATTATAATAAAAACACTTTATTAAAATGGTAGTTCAAAACTATAATTATATAATATAAAACCGACAAATACTTCAGTCAAAACAACACTGTTGTAGCAAAGTCATCCTTAATAAATGCATGTTCATATAAAAAATCTGAAGTGTTGTGTTGCAGCTCCTGTTTCCTTCCTTGCTTTTTCTGCAGCTTCTCTGTTCATTCCTTTCCAATGCCCCCTTTTGTTGATCTTTAACTGAACCTCAATACCGATTAAAACTTCACTTTCCAATACTCTTGACTCTAAAGTTCTCAACTTCATCGAACAACACTCATTCAAGAAGGGCCTTATTACCTTGGAGAATTTCTTTTTCTAGATTACTGTCAGTAACAGATAATTCTTTGAAAGGGGTATACAATTTATTCTCCAACACTGTTGGGAGCACCTTTTCTTTCTTGGGATTGTTTGTTCTACACTAGGTAAGAAACCTAGTCTCTGTTTTACATATAATATTCTTGATTGTGATGAATTCTTTTGTGTAAATGATGTTGTTCATCTCATTCAACCAAAAGTATAATCTCAGCACATAAAGATATGCATAAAAACCATCTGTACATGAGAATAGTATCTATAGGAAAACTCGTATTTATCTAATTCTCTGTTTATTAGTGTTTACAAGGAATAATTTTGGATACCATTCAAATTAAGGTATTATCACTAACCAGATCAATTAGTACAAGGTTGTTATAGATTGATCAGGTATCTTAAACCCAAGTCATAAGTATGCAACTATGTTAAACACAGAAAATGTTTTATTGCATATAGTGGTCTTGTCCGGTTCATCTTACTCCATTAACTTCTAATTCTTTGATCCTATTAGAAAAGGAATTAGACGATATAGAGTTTAACATGCAGAGAAATTTTGATTTCTAATTAGTCACCTTTTACCTCAGTCACCATCAGCATCCCAACGACCCTGCAACTTGTGGTAATTACCTC


Gene Sequence:
>Vu_16981(-)
ATGAGATTTAGGTGGGATCTCTTTCAGTGCTGCTTCCCTAGCACATCTTCTGACACATTTCAAAAGCGCAGTAACTTGAAGTGGCCAATCATTCCCTACAAGGAAATTGAAAAGGCCACAAATAATTTTGATCAATCTCGTCATCTTGGTAGTGGAGAAAGAAAGAAAGGCTTTATCAGTCAGTACTACGGTAAGAGACTGTGCCATAAGCTTCTATATAGAGGGATTTTGGATAATTTGCTGTGACCGGAACCAAGTATCAATGTATAACTTCAATTTTGATTAACATGAAAAGAAGTTAAAAGACTATACCTCATGATTTTGCTCAAAACATTTTCTTACGATTATTTATATCAATTGTTTTAGGAACACTTGAGGATGGACGTGAGATTACAATCCAGCGCTTTACAGAAGACAGGCGCTACATATTGCAACAGTTTATCAATGAAACTGTTATCCTAAATTACTTACCTCACAAAAATATTGTGTCAATTTACGGATGTACTTCTCATCGTGAGGAACCTCTGCTCGTGCATGAATACCTATCCAGTGGAAATCTTGCTGCACATTTTCGAGGTGAAAAGGACGAAAACATTGCACTACCCTGGCTTAAACGATTGGATATAGCCATTGATATTGCAAATGCATTGGCCTATCTTCACTATTACGGCATCATCCACCGTAATGTGAAATCCAGCAATATTCTCCTAGATGTGAACTTTTCTGCTAAACTTGGTAACCTTCATTTATCATGCAAACTTCCAGATGGAGTTCCTGTTGACACCACCCATGTTACTAGTGATAGAGTAGGTTCAAGTGGTTATATAGACCCAGAGTATTTGACAAAAGGCCAGCTTAGTGTGAAAATTGATGTTTATAGCTTTGGAGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTTTCAATATTCCATATTATGAATGAGGAGGATAATCTTAATACCCTTTTAAGCAGAAAAATTGAAAACAAAACTTTGGTGGAGCTGTTTGATCCAAGACTTGGGTTCCAATCAAACCTTAACATCAAGCAGTTGATGACTGCTACAGCTGAGCTCGCAGTTCTCTGTATGAAATGTCCACAAGAATCGAGGCCAAACATGGAACAGGTGCTAGAGATTCTCAATGAAATGAAGCAAGGGAGATATGTAACAATCTCTCACTCAACTAAAGGTACAATATCTAAACCATATTATATCCCTTTTCCTCTCTCATGGTTTTCTGGCTTCTATATGTTTTAGTGTTTACAGACTGAGGATAAAAGGTTTTAATACCGTCTTATAATCCATACATTTCAGCTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACTAACAATTTTGGCACCTGCCTTGGTAAGGGAGGGTATGGCAGCGTATACTATGGTGAGAGACTAATTAGTCCTCATAATTTAAATCATGGTTCTCTGTAAGAAATATGCATATAGAAGTTAGATTATGCACAGTGTAAAACAGTTTTATATTGTCATCTAATCAGAAATCACCATGTATAATAAGTTTATTGGCTTCAATAACGAACATGTTAACATTTGTGTCAACGGTTATTTCTGATTAATTGACCATGTAAACACCTTTTACATTGACCGTGCATAATTATTAAAATCATGCATATATCCTCCTTTATTTGTTACACATACAAAAATATTTCACACCAATAGATTTATCTTTGTTCTGATGGCATTCCATTGTAATAGGAAAACTTAAAGATGGACTAGAGGTTGCAATAAAATGTTTCCATGACGAGAATGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAATCTGATATCTTAGGTCTCTTGCACCACCAAAATCTGGTCTCACTCTATGGCCGCACTTCTCGCCATTGCAAGAAACACATGCTAGTGTATGAGTACATCTCCAATGGCACACTTTCCAAACATCTTCATGAGTCTTCCGGTGATAAACTACCATGGCAAACTAGATTGAATATTGCCATTGAAACTGCAACTGCATTGGTATTTCTTCATGACTCAAGTGTCATCCACCGTGATGTGAAAGGGAGTAACATTCTGTTGGATGAAAATTTTACTGTTAAAGTTGCTGATTTTGGATTCTCACGGTCTCTTCCAGATCATGTTACTCATGTTACAACTATTCCAGTAGGAACTCGTGCTTATATAGATCCTGACTACTATATATCTGGAAGGGTCAGTAACAAAAGTGATGTATATAGTTTTGGAGTGGTCTTGTTTGAACTCATATCATCTATCCACCCAAGTTTGGTTGCAGGCACAGATAATGAGACTCTGGCACAGTTTGCAAAGAGAAAAATCTTGAACAATGAATTAAACGAGATAGTTGATGAAAGCTTTTCCTGTGGTTCTGACGATAACATTTTGGAAATGATATCAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAGTTCAGACCATCCATGAAACAGGTGCTAGAGACCTTGGAAGGCATAAGTAAAGGAAAATGGGGATTCAACCAGATGACGTAG