Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16799 LG4 28732416 28735379 "hypothetical protein GLYMA_U035700, partial "
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 28732488 synonymous_variant p.Phe634Phe
T/A 28732550 missense_variant p.Asn614Tyr
C/T 28732573 missense_variant p.Arg606Lys
G/A 28732604 missense_variant p.Arg596Trp
T/C,A 28732633 missense_variant p.Lys586Ile
C/A 28732667 missense_variant p.Asp575Tyr
T/C 28732730 missense_variant p.Arg554Gly
C/G 28732737 missense_variant p.Lys551Asn
T/C 28732746 synonymous_variant p.Glu548Glu
T/C 28732749 synonymous_variant p.Lys547Lys
T/A 28732802 missense_variant p.Ile530Phe
G/A 28732868 missense_variant p.His508Tyr
A/G 28732870 missense_variant p.Ile507Thr
G/C 28732922 missense_variant p.Arg490Gly
G/A 28732943 missense_variant p.Leu483Phe
A/C 28732951 missense_variant p.Leu480Arg
A/G 28732958 missense_variant p.Phe478Leu
C/T 28732967 missense_variant p.Glu475Lys
A/T 28732985 missense_variant p.Ser469Thr
C/G,T 28732986 synonymous_variant p.Thr468Thr
G/C,T 28732987 missense_variant p.Thr468Arg
C/T 28732991 missense_variant p.Gly467Ser
A/C,* 28732996 missense_variant p.Val465Gly
G/T 28733002 missense_variant p.Ala463Glu
C/G 28733003 missense_variant p.Ala463Pro
T/G 28733005 missense_variant p.Tyr462Ser
T/A,* 28733042 missense_variant p.Ser450Cys
T/A,* 28733043 synonymous_variant p.Ser449Ser
T/C 28733048 missense_variant p.Lys448Glu
C/A 28733052 missense_variant p.Lys446Asn
T/C,A 28733054 stop_gained p.Lys446*
A/G 28733062 missense_variant p.Met443Thr
G/T 28733072 missense_variant p.Leu440Ile
A/G 28733080 missense_variant p.Phe437Ser
C/T 28733107 missense_variant p.Arg428His
G/T 28733128 missense_variant p.Pro421His
T/C 28733130 synonymous_variant p.Gly420Gly
A/G 28733144 missense_variant p.Phe416Leu
C/A 28733163 missense_variant p.Arg409Ser
G/A 28733181 synonymous_variant p.Phe403Phe
C/G 28733197 missense_variant p.Gly398Ala
G/T 28733210 missense_variant&splice_region_variant p.Leu394Ile
T/G 28733365 intron_variant
C/A 28733421 intron_variant
C/T 28733435 intron_variant
T/G 28733484 intron_variant
T/C 28733490 intron_variant
C/T 28733492 intron_variant
A/G 28733498 intron_variant
G/T 28733504 splice_region_variant&intron_variant
C/T 28733535 synonymous_variant p.Arg385Arg
C/T 28733536 missense_variant p.Arg385Gln
T/C 28733547 missense_variant p.Ile381Met
G/C 28733566 missense_variant p.Ser375Cys
A/T 28733567 missense_variant p.Ser375Thr
C/T 28733579 missense_variant p.Val371Ile
A/G 28733580 synonymous_variant p.Ser370Ser
C/G 28733583 stop_lost p.Ter369Tyrext*?
G/C 28733645 missense_variant p.Leu349Val
C/T 28733647 missense_variant p.Cys348Tyr
C/T 28733655 synonymous_variant p.Leu345Leu
T/C 28733681 missense_variant p.Ser337Gly
C/T 28733685 synonymous_variant p.Ser335Ser
G/T 28733703 missense_variant p.Phe329Leu
C/A 28733744 missense_variant p.Asp316Tyr
G/T 28733749 missense_variant p.Thr314Asn
T/C 28733753 missense_variant p.Arg313Gly
C/T 28733754 stop_retained_variant p.Ter312Ter
T/C 28733762 missense_variant p.Lys310Glu
A/G 28733827 intron_variant
C/T 28733857 intron_variant
T/G,A 28733858 intron_variant
T/G 28733865 intron_variant
T/C 28733873 intron_variant
G/C 28733874 intron_variant
A/C 28733881 intron_variant
G/T 28733883 intron_variant
T/C 28733889 intron_variant
T/A 28733905 intron_variant
A/G 28733908 intron_variant
T/G 28733946 missense_variant&splice_region_variant p.Ser298Arg
G/C 28733947 missense_variant&splice_region_variant p.Asn297Lys
C/G 28733958 missense_variant p.Val294Leu
T/C 28733964 missense_variant p.Lys292Glu
C/T 28733965 synonymous_variant p.Leu291Leu
G/C 28733997 missense_variant p.Gln281Glu
T/A 28734008 missense_variant p.Lys277Ile
G/C 28734014 missense_variant p.Ser275Trp
T/C 28734023 missense_variant p.Asn272Ser
A/G 28734031 synonymous_variant p.Ser269Ser
G/C 28734065 intron_variant
T/G 28734077 intron_variant
T/C 28734084 intron_variant
T/C 28734096 intron_variant
G/A 28734177 intron_variant
G/A 28734183 intron_variant
A/T 28734199 intron_variant
C/T 28734203 intron_variant
C/G 28734242 intron_variant
C/T 28734270 intron_variant
C/T 28734271 intron_variant
A/G 28734277 intron_variant
T/C 28734291 intron_variant
C/A 28734303 intron_variant
T/C 28734306 intron_variant
G/T 28734313 intron_variant
C/T 28734319 intron_variant
C/T 28734348 intron_variant
T/C 28735109 missense_variant p.Ile91Val
T/C 28735163 missense_variant p.Lys73Glu
T/A 28735224 synonymous_variant p.Gly52Gly
C/A 28735235 missense_variant p.Asp49Tyr
A/T 28735239 missense_variant p.Ser47Arg
G/A 28735356 synonymous_variant p.Ile8Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16799.1
MLREKNIILTSWQEGASMIQQRLGRKKVLLILDDVDNREQLEAFAGSADWFGPGSRVIITTRDEQLLKSHGIKRTYEMEALNFNDSLQLLIWNAFKRENVDPSYQDVLKRVVTYASGLPLALKVIGSNLYSKSVEEWESAIEHYKRIPNGEILEILKVSYVALGEEEKSVFLDIACFFNESSLEEFEKILDVLYDKNMKHHIGVLVDKSLIGFWTDGEDHIYMHDLIQDMGRHIEWQKSPEEPGKRTRLWLEKDILHVLKHDKKFENLSVLNFDSCKFLTQIPDMSDFVNLKEVSFNSLEKFPEILGKMENIEDLGLAGLPIKELPLSFQNLIGLEELFLSSCEIVHLPNLSTLSVTEDNVGSMVPSKLECFSALSCNLDDNFFSAGFMQLAQELYYEGRKIMFQFPGARFPEWFDFKSSGPSCSFWFRNKFPARVLFLLLIHMNKKDKSSTFYPQVYINGKYATVGGTSYLEQTEFEFDLTYLSDLKMYRNLHEQPSEKEWNHVKVIHYVFEENVKATGIHVFEENKEDIRFDDPYIMEDIMEEEEKEEEKEEREEEEEEKEEKAEEEENSIMEDTMEEEGRRGKKRKLHHGRHSRFDDPYTNKKRKKGKEKRNKKKKKRSRQKKKKIASWKTFDLMILISWKTSWKKRKQQKKTTS*


CDS Sequence:
>Vu_16799.1
ATGCTTAGAGAGAAGAATATCATCTTAACAAGTTGGCAAGAAGGAGCATCAATGATACAGCAGAGGCTGGGGCGAAAGAAGGTTCTCTTGATTCTAGATGATGTTGACAACAGAGAGCAGTTAGAAGCATTTGCTGGAAGTGCTGATTGGTTTGGACCCGGCAGCAGGGTTATCATTACCACTCGGGACGAACAGCTGCTAAAATCTCATGGGATTAAAAGAACTTATGAGATGGAGGCATTGAATTTTAATGATTCTCTTCAATTGCTTATATGGAATGCTTTCAAAAGGGAAAATGTTGATCCAAGTTACCAGGACGTGTTGAAACGTGTAGTAACTTATGCTTCTGGTCTTCCATTGGCTTTAAAAGTAATAGGTTCCAACTTGTATAGCAAAAGTGTAGAAGAATGGGAGTCTGCGATTGAACATTACAAAAGAATTCCAAACGGTGAAATTCTAGAGATACTTAAAGTAAGCTATGTTGCTTTGGGGGAAGAAGAAAAAAGCGTCTTTCTTGACATCGCCTGTTTCTTTAATGAAAGTAGTTTGGAAGAATTTGAAAAGATACTTGATGTTCTTTATGATAAGAACATGAAACATCATATTGGGGTGTTGGTGGATAAATCTCTCATAGGTTTTTGGACGGATGGAGAAGATCATATTTATATGCACGACTTGATTCAGGACATGGGTAGACATATTGAATGGCAAAAGTCACCCGAAGAGCCAGGGAAGCGCACGAGATTATGGTTAGAGAAAGATATCCTTCATGTTTTAAAACACGACAAGAAGTTCGAGAATCTATCTGTCTTGAATTTTGACTCGTGCAAATTTTTGACACAGATACCAGATATGTCTGATTTCGTAAATTTGAAGGAAGTTTCATTTAACAGTCTTGAGAAATTTCCAGAAATACTAGGAAAGATGGAAAACATAGAGGACCTTGGATTGGCGGGTCTTCCCATTAAAGAATTGCCACTGTCGTTTCAAAATCTTATTGGACTCGAAGAGTTATTCTTGTCATCATGTGAAATTGTTCACTTGCCTAACTTGTCTACTTTGAGTGTTACTGAAGATAACGTAGGCTCAATGGTTCCTTCAAAGTTAGAGTGTTTTTCAGCACTCTCTTGCAACCTGGATGATAACTTCTTTTCGGCAGGTTTCATGCAGTTGGCACAAGAACTATACTACGAAGGTAGAAAAATTATGTTCCAGTTTCCAGGAGCAAGGTTTCCAGAGTGGTTTGATTTCAAGAGCAGTGGACCTTCATGTTCTTTCTGGTTTCGTAATAAGTTTCCTGCCAGAGTTCTTTTTCTTCTTCTTATACATATGAATAAAAAGGATAAGTCAAGTACCTTTTACCCTCAAGTGTACATTAATGGGAAATATGCAACTGTCGGAGGCACGTCTTATTTGGAGCAGACGGAATTTGAATTCGATCTAACATACCTCTCTGATCTAAAAATGTATCGTAATTTGCATGAACAACCTTCAGAAAAGGAATGGAATCACGTGAAGGTTATACATTATGTATTCGAGGAAAATGTCAAAGCAACAGGAATCCATGTATTCGAGGAAAACAAGGAAGACATTCGGTTTGATGATCCTTATATCATGGAAGACATCATGGAAGAAGAAGAAAAAGAAGAAGAAAAGGAAGAAAGAGAAGAAGAAGAGGAAGAAAAAGAAGAAAAGGCAGAAGAAGAAGAAAATAGCATCATGGAAGACACCATGGAAGAAGAAGGAAGAAGAGGAAAAAAAAGAAAACTGCATCATGGAAGACATTCCCGGTTTGATGATCCATATACCAACAAGAAAAGGAAGAAGGGAAAGGAGAAGAGGAACAAGAAGAAAAAGAAAAGGAGCAGGCAGAAGAAGAAGAAAATAGCTTCATGGAAGACATTCGATTTGATGATCCTTATATCATGGAAGACATCATGGAAGAAGAGAAAACAACAGAAGAAAACAACATCATGA


Promoter Sequence:
>Vu_16799::LG4:28735379-28737379(-)
CTTATAAATTAAATCAAAGGTTAAAATAATTAACATTTAAATAAATGTATACATTAAATACAAAATAACAAAATAATTTAATAACAAAAAATTATCAAAAAATTTAATACCAAATATAAACTATTAAATAACAACAACAAATTAACTACTATATAAAAAAAAATTCTATAAAATAACCTAATACAGAATAAATAACAAAAAATTTATAAAAAAATAATAGAAATAAATATCATTAACAGATAAATAATGCAATTTAAATAAATAAATATAAAAACATTAAACAAATAATAAAAAAAAAATACTATATATGAAAGTTAAAATAACTCCTGCAGTACATAGCATAATTTATATGAAACAATCATTTAACAAAGTAAATATCTTTTAATTAAAGCAAAGAGTGTCTTTGCATTGATAAAATGGATTGAATACAAATGGGAATATAATACGAATTACAGATATGCAAAGCTGAATCATAAATCCAGGATGATCAATAAACATTCTGAAATAACAATCAAGTCAAATATGGTTGTAAAAAGCTTCATCCATTTTTGTAATACCTGACCTCTATTTGGACATCATTTTCATCAGCATCATTAAATCAAATTAAATTACAGCAACACTTCCTTCCTTTCTATTTATAAGACCAAATTACTCATCATGGCTAAGAAAAATGGTTCATTATTTGATAGAAACAGATCTATTTTTATATATATACTTTATTATACTTTTTGTAATAATTTTATGCTTTATTATATGCAAATTTAAACAGATCTGCCAATTATTCTAAATAATTGTGTGTATACTTTTTTTTGGAAAATTTCTAAGAACTTGAAACGTGATGAACACCTGTCTCGTAACGTAGAGTGGGGGTTATACATAGTGTAATAATGTTGATCCCTTTTTCAGAATATTTTAGAATAAACTCGGTTTTTAAAGGAGATTAATACTTTTACCAAAAATAATTTTTTATTATTTTTGGTAAAATTATTATGCGAAATTTATAAGAGCTAAATTTCCCATAATAATTTTATGTTTATATAAAGTTTCCATTTACTGTCCCAACACGCTAACAATTATCATTCCAGACTTTGTTCTAATGGCAACTCCAAGTTCCCGTAGATTCACGTACCATGTGTTCCTCAGCTTTAGAGGGGAAGACACGCGTCGTGGTTTCACTGGTTATCTCTACAAAGCTCTCTGTGACAGGGGACTTCACACTTTCATGGATGATGACAAACTTCAAAGCGGAGAGGAAATCACACCAGCGCTTCTGAAAGCAATTGAAGAGTCTAGGATTGCCATCGTTGTGCTCTCTCACAACTATGCTTCTTCCTCCTTCTGCTTGGATGAACTTGCAACTATAATTCACTGCCAGAGTAAAGGGCTGTTGGTTATACCAGTGTTTTATAAGGTGGATCCTTCTAATGTCAGACATCAGAAAGATAGCTATGAAGAAGCATTGGCTAAGCATCAAAAGAGGTTCAAAGGGCAGGAGGAGAAGTTAAATAAATGGAAAATGGCTCTGCGTCAAGTTGCTGACTTGTCTGGCTATCACTTGGGAGATGGGTACCCACTTACCAATCTTTTTATTTTATTGAAAATTACTATACGTATCAAGACATGTTTACAATGCTTCTAGTTTAGCTTAGTTATACTTTAATGTTTGGAACAGGGATGAATACGAGTACAAGTTTATTGAGAGCATTCTTGAACGGGTTTCCACGGTGATTAATCATGCTCCTTTACATGTTGCGGATTACACAGTTGGCCTACCGTCACGGGTGCTGAAAGTCCAGATACTTTTGGATGTTGGATCGGAAGATGTTGTCCACATGATAGGGATCCATGGAATGGGTGGGTTAGGGAAAACAACACTCTCTCTAGTAGTTTATAATTCGATTGCTGCTTATTTTGATGAATCATGTTTTCTTCAAAATGTAAGAAAAAATTCAAAAAACAAAGATGAGCTACAACACCTCCAAAGCATCTTTCTTTCAAAA


Gene Sequence:
>Vu_16799(-)
ATGCTTAGAGAGAAGAATATCATCTTAACAAGTTGGCAAGAAGGAGCATCAATGATACAGCAGAGGCTGGGGCGAAAGAAGGTTCTCTTGATTCTAGATGATGTTGACAACAGAGAGCAGTTAGAAGCATTTGCTGGAAGTGCTGATTGGTTTGGACCCGGCAGCAGGGTTATCATTACCACTCGGGACGAACAGCTGCTAAAATCTCATGGGATTAAAAGAACTTATGAGATGGAGGCATTGAATTTTAATGATTCTCTTCAATTGCTTATATGGAATGCTTTCAAAAGGGAAAATGTTGATCCAAGTTACCAGGACGTGTTGAAACGTGTAGTAACTTATGCTTCTGGTCTTCCATTGGCTTTAAAAGTAATAGGTTCCAACTTGTATAGCAAAAGTGTAGAAGAATGGGAGTCTGCGATTGAACATTACAAAAGAATTCCAAACGGTGAAATTCTAGAGATACTTAAAGTAAGCTATGTTGCTTTGGGGGAAGAAGAAAAAAGCGTCTTTCTTGACATCGCCTGTTTCTTTAATGAAAGTAGTTTGGAAGAATTTGAAAAGATACTTGATGTTCTTTATGATAAGAACATGAAACATCATATTGGGGTGTTGGTGGATAAATCTCTCATAGGTTTTTGGACGGATGGAGAAGATCATATTTATATGCACGACTTGATTCAGGACATGGGTAGACATATTGAATGGCAAAAGTCACCCGAAGAGCCAGGGAAGCGCACGAGATTATGGTTAGAGAAAGATATCCTTCATGTTTTAAAACACGACAAGGTAAGTAAGCTTCATCAATGACTGTTGTACTTTCTTAGCTTGATTTAATATTTTTTGTGTCATCTGTTCACATCATAGTATTTTTTTTTCTCTTTACAATTTTGCAAAGTTCTCTTAAAACGTGAATTTTTTTGGATTCCTGAATGTGACTTTTGCATTAACAGGGTACTAGCAAAACTAAAATCATAATCTTTGATTGGTCTATATATGAGCGAGAAAAAACGGTAGAATGGAATCCCAACGCCTTCAGAAGAATGAAAAACCTTAAAATGCTTATCATTAGAAATGGTAAATTTTCCAAAGGTCCCAATTATTTTCCGGAAAGTTTGAGAGTACTGGAATGGCATGGATACCCTTCAAATTCTTTACCATCAAATTTTGATCCGAGCAATCTTGTGACATGCAAGCTACCTCACAGTCATTTTACGTCATTTGAATTCCTTGACTCATCAAAGGCAAGCTTGAAGACTGTTTTCCTCATCTTGTAAATTATTAAAACAGCATAAATATCTTAACTTTTTTTCTCTTTATTTTCTTTGCAGAAGTTCGAGAATCTATCTGTCTTGAATTTTGACTCGTGCAAATTTTTGACACAGATACCAGATATGTCTGATTTCGTAAATTTGAAGGAAGTTTCATTTAACAGGTGTGAGAGTTTAGTTGCAGTTCACGACTCAATTGGTTTAATGAGTAAACTTAAAATATTGCATGCGGAACATTGCATCAAGCTTAAGAATTTTCCACCTCTCAACTTGCCCACTCTTGAAAGCCTAAAACTTTCGTTTTGTTCCAGTCTTGAGAAATTTCCAGAAATACTAGGAAAGATGGAAAACATAGAGGACCTTGGATTGGCGGGTCTTCCCATTAAAGAATTGCCACTGTCGTTTCAAAATCTTATTGGACTCGAAGAGTTATTCTTGTCATCATGTGAAATTGTTCACTTGCCTAACTTGTCTACTTTGAGTGTTACTGAAGATAACGTAGGCTCAATGGTTCCTTCAAAGTTAGAGTGTTTTTCAGCACTCTCTTGCAACCTGGATGATAACTTCTTTTCGGCAGGTTTCATGCAGTTGGCACAAGTGCGTTCTTTAATTCTACGGAACAATAATTTCAAACACCTTCCTGAATGCATCAAAGAATTTCACAACCTCAACAGGCTTGATGTGACTGATTGCAAACATCTTGAGGAAAATAAGAGGGTTTCCACCAAAATTAAAATATTTCGATGCAAGAAACTGTATATCTTTGACTTCCACCAGCTTAGACATGTTGCTAAATAAGGTTTTGTCTTGCTTTTGAATTTTTTGATTGATAATACGTAGTGCTCTTAATGTTGGTAAGCTAATGAGTTCTTTATGAATTATGTATGACTAACAGGAACTATACTACGAAGGTAGAAAAATTATGTTCCAGTTTCCAGGAGCAAGGTTTCCAGAGTGGTTTGATTTCAAGAGCAGTGGACCTTCATGTTCTTTCTGGTTTCGTAATAAGTTTCCTGCCAGAGTTCTTTTTCTTCTTCTTATACATATGAATAAAAAGGATAAGTCAAGTACCTTTTACCCTCAAGTGTACATTAATGGGAAATATGCAACTGTCGGAGGCACGTCTTATTTGGAGCAGACGGAATTTGAATTCGATCTAACATACCTCTCTGATCTAAAAATGTATCGTAATTTGCATGAACAACCTTCAGAAAAGGAATGGAATCACGTGAAGGTTATACATTATGTATTCGAGGAAAATGTCAAAGCAACAGGAATCCATGTATTCGAGGAAAACAAGGAAGACATTCGGTTTGATGATCCTTATATCATGGAAGACATCATGGAAGAAGAAGAAAAAGAAGAAGAAAAGGAAGAAAGAGAAGAAGAAGAGGAAGAAAAAGAAGAAAAGGCAGAAGAAGAAGAAAATAGCATCATGGAAGACACCATGGAAGAAGAAGGAAGAAGAGGAAAAAAAAGAAAACTGCATCATGGAAGACATTCCCGGTTTGATGATCCATATACCAACAAGAAAAGGAAGAAGGGAAAGGAGAAGAGGAACAAGAAGAAAAAGAAAAGGAGCAGGCAGAAGAAGAAGAAAATAGCTTCATGGAAGACATTCGATTTGATGATCCTTATATCATGGAAGACATCATGGAAGAAGAGAAAACAACAGAAGAAAACAACATCATGA