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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16707 LG4 27798495 27802066 TMV resistance protein N
Map

Annotations  
category   relationship type   keyword
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_16707.1
MNCSKEYESEIVKKITEEISTKLNRPPLHIADYPVGLKVRMQQIQKLMGGEFDKKVTMLGIHGMGGIGKSTLSRAMYNLMAHQFEASHFLANVREKSDKDGLVHIQETMLSELVGERNIKLGDVHRGIPILQHRLCGKKVLLVLDDISKKEQLHATAGGLDWFGPGSIIIITTRDKHLLDVHGVQKQYMVGGINFMEALELFKWNAFKNKEVDPCYKEVTERAMYYANGLPLALETIGSNLFGKTLDEWESALETYERIPNRDVQEVLKVSYDSLDAYEKEIFLDIACFFRRCSLGYVTDKLEARGFPPKFGLRVLEEKSLIKIRECPHETVTMHDMIRCMGKEIVRQQKPLPHKRNRIWFYEDVVCVLEKNMENDKIEAVMLEMPEHQEEMQCTPKFGKMKSLRMLIIEKKVSFLGSPATLPNSLRVLEWRGYPATSLPSNFHFKNLVILNLSHSYFGWYKPLQACCKNIRRIPDISGFPNLTKLCVRECTNLFEIHDSVGSLLHLKEFCAEGCTKLTIGPSRIKLISLEHLCFRGCSSLVMFPEVLAPMHKLKYVDLGGTGIRNLPPSMQNLKDITILPASIEECHSLKFLHVTNCKKLQEIRGLPLNINQFYAANCSVKANSLILKLRQAIDCGAMGICVLPGRKIPELFDHSSRGNSVSFWFRKELPTLAVCAIIGVWDNVKPPFVAFFSHIIILNSRNDFQHTLNTDIQTVLLTNEWIPGKILLTIRPKSDLGKSGEIRRTGVYVNRTLSSMEDVRFEDPYDLNKASTMENKLVLLGEASDTQQQAQSSALFNLTTSLESLIGEQPLNYEYNNSYSKESASTVDSNNQGVLVDDQPILAPSSAETQNAEAKREMAQLISEVSSEFTAQVSMKIESTASQSPKVDEVEAGLETQNQFRNTMVLENQIHQRLTRIKKMKEELGEKFSAIKADISAIEANNSSIKANISDIKAIFLQIDQRYNN*


CDS Sequence:
>Vu_16707.1
ATGAATTGTAGTAAAGAGTATGAGTCTGAGATAGTGAAAAAGATCACAGAAGAGATCTCCACTAAGCTTAATCGACCTCCCTTGCATATTGCTGATTATCCTGTTGGTTTGAAAGTTCGGATGCAACAGATACAAAAACTCATGGGTGGTGAGTTTGATAAGAAAGTGACTATGCTTGGGATTCATGGAATGGGAGGAATAGGAAAATCAACTCTTTCACGTGCGATGTACAACTTGATGGCACATCAATTTGAAGCTTCGCACTTTCTTGCTAATGTAAGGGAAAAATCAGATAAGGATGGTCTGGTGCATATCCAAGAGACAATGCTGTCTGAGTTGGTGGGGGAAAGAAATATCAAGCTAGGAGATGTGCATCGTGGAATTCCAATACTACAACACAGACTTTGTGGGAAAAAGGTCCTCCTTGTGCTTGATGATATTAGCAAAAAAGAACAATTGCATGCAACTGCTGGAGGACTTGATTGGTTTGGCCCTGGTAGCATCATCATCATAACAACAAGGGATAAGCATTTGTTAGATGTTCATGGAGTTCAAAAACAGTACATGGTTGGTGGAATTAACTTTATGGAAGCCCTTGAATTGTTTAAGTGGAATGCTTTCAAAAACAAAGAAGTTGATCCATGTTACAAGGAAGTCACAGAGCGTGCAATGTATTATGCCAATGGCCTTCCATTGGCTTTGGAAACGATAGGCTCGAACTTGTTTGGCAAAACCTTGGATGAATGGGAATCTGCGTTAGAAACTTATGAGAGAATTCCAAATAGAGATGTTCAGGAAGTTCTTAAAGTTAGCTATGATAGTTTGGATGCTTATGAGAAAGAAATATTCCTTGACATAGCTTGCTTCTTTAGAAGATGCTCTCTTGGATACGTTACAGATAAGCTTGAAGCAAGAGGATTTCCTCCAAAATTTGGTCTGAGAGTGCTAGAAGAAAAATCTCTCATTAAAATTCGGGAATGTCCACATGAAACTGTGACAATGCATGACATGATTCGGTGTATGGGAAAAGAAATAGTTAGACAACAAAAACCTCTGCCTCACAAACGGAATAGGATATGGTTTTACGAGGACGTTGTTTGTGTGTTGGAGAAAAACATGGAAAATGATAAAATTGAAGCGGTGATGTTGGAGATGCCAGAACACCAAGAAGAAATGCAATGCACTCCAAAGTTTGGAAAAATGAAAAGCTTACGGATGCTTATTATAGAAAAGAAGGTTAGCTTTCTTGGAAGCCCTGCTACTCTGCCAAACAGTTTGAGAGTGCTGGAATGGCGTGGATATCCTGCAACTTCTTTACCGAGCAATTTTCATTTCAAGAATCTTGTCATACTCAACTTGTCACACAGTTACTTTGGATGGTACAAACCACTACAGGCATGTTGTAAGAATATTAGACGAATACCTGACATCTCTGGTTTCCCCAATTTGACAAAACTTTGTGTTCGTGAATGCACAAATCTGTTTGAGATTCATGATTCAGTTGGATCTTTACTTCATCTTAAAGAGTTTTGTGCTGAAGGATGTACCAAGCTCACAATTGGTCCAAGTCGCATAAAGTTGATATCTTTGGAGCATCTGTGCTTTCGGGGCTGCAGCAGTCTTGTCATGTTTCCAGAAGTATTGGCTCCAATGCACAAACTAAAGTACGTTGACTTGGGAGGAACTGGCATAAGAAATCTGCCACCATCAATGCAAAATCTTAAGGACATTACAATCCTTCCTGCCAGCATTGAAGAATGTCACTCTTTGAAATTTCTGCACGTCACCAACTGCAAGAAGCTTCAAGAAATTAGAGGACTTCCATTGAATATTAATCAGTTCTACGCAGCAAACTGTTCTGTTAAAGCCAACTCTTTGATATTAAAACTCAGGCAGGCCATTGATTGTGGTGCAATGGGAATCTGTGTTCTTCCAGGTCGGAAAATCCCAGAATTGTTTGACCACTCTAGCAGGGGAAACTCTGTAAGTTTTTGGTTTCGTAAAGAATTGCCCACTCTGGCTGTGTGTGCTATTATTGGAGTCTGGGATAATGTCAAGCCTCCTTTCGTTGCCTTCTTTAGTCACATAATTATACTCAACTCTCGAAATGATTTTCAACATACGTTGAATACGGATATTCAGACAGTGCTTCTGACGAATGAGTGGATTCCTGGGAAAATACTGTTGACGATACGTCCAAAAAGTGATTTAGGTAAGTCGGGAGAAATCAGAAGGACAGGAGTTTATGTAAATCGAACACTTAGTAGCATGGAGGATGTTCGATTCGAAGATCCTTATGATCTCAATAAAGCAAGCACTATGGAAAATAAACTTGTGTTGCTTGGTGAGGCATCTGATACACAACAACAAGCACAATCCTCTGCTTTATTCAACCTCACAACCTCATTAGAATCTCTTATTGGTGAACAACCTTTGAATTATGAGTACAACAATTCATATTCAAAAGAATCGGCATCCACTGTTGACTCCAATAACCAAGGAGTACTTGTAGATGATCAACCAATATTAGCTCCAAGTTCTGCAGAGACGCAAAATGCTGAGGCCAAAAGAGAAATGGCACAACTGATATCGGAAGTTTCAAGTGAGTTCACAGCTCAAGTAAGTATGAAAATTGAGTCAACAGCATCCCAATCACCTAAAGTTGATGAAGTAGAAGCAGGTTTGGAAACTCAGAATCAGTTCAGAAATACTATGGTTTTGGAAAACCAGATACACCAAAGGCTGACCAGGATTAAGAAAATGAAAGAAGAATTAGGAGAGAAATTCAGTGCTATTAAAGCCGACATCTCTGCCATTGAAGCTAACAACTCTTCCATTAAAGCTAACATCTCAGACATTAAAGCTATATTTTTGCAGATTGATCAGAGGTACAACAATTGA


Promoter Sequence:
>Vu_16707::LG4:27796495-27798495(+)
TCGAGTGCGAGGACGCCTGTAGCTACACGGTTTCATACAGTCCGGACGGTCGTCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATACAATGTTACATGATGTTATATGTTAAACTATGTGATTGTGTGGAATGACATGTTCATTGTATGTGTTGATGTATATCTTAAATTATATAAGCTTACCCTTTCGTTTTCCTTGTGTTGTCCATTGTACCTGTACGTTTGTCCTGTCTTGCAATGATCATCCGTGTGGATGTGAGCAGAAGGCGAGGCCACTCTAGAGGACGTTATTGATGAAGAAAACTTAGTCGAAGTTGAAGTGAAATCAGAGCAGTAGGACGTCCGTCCTTTATAGTTTTTGTTATTTCGCTTTTGAAGTAGACGTTCGGTTATTTCTTTTTGTAAAACCGTTCGTCCTAGATCTGTACTGTTTTCGTTTAATGCTTGATATTTCTGTATTAAAGCCGTTCGGCTTTTGAACCTCGTTTCTATTAATGTAAAGACTGCCTTATCTTACTGTTAATGGTAATTAATTCTGAATTATGGTAATTACCGTATTTTTGGGATGTTACATTAGTGGTATCAGAGCAGTTTTGTTCCTTAAGGAACGCTGTAGGTTATGAGCATACTATGTTTGTGCTGTGTACTCAACATTCGTTTGATGAGTGTATCAAACCGTCAAAATTTAACTAATAATTATTTTGTCTGCTTATCAGAGAGAACAAATGACACCAAGAGCACATCCTCAGCCTGCCGAACGTGATGCGTCTGACCACATCATTTTTTAAATTTTATATTAAACTGGGCAAAAAAGTGAGTGAGAGTTGTTTCAAGTTATGAATTCGGCTTCTAGTGACTAGTAAATATATCTATCTTAAGAATTAAAATAGAAATATTTGAGTAATTTATTTTAAATGAGTTTTTTGTAGGAGAAAATTATTAAAATTGAGTCCACATCATCCCTGTATTATGTTACTCTACGTCAATGTTGGCATGCTACCAAAAGGAATTTAAAATATTTTTACATGCTCAGCAAAATATTTTATATAATTTACTATTTATTATACTATTTTTTTTTGTGTTTTTCCAATTCTCTTCTTTTATATTTTAAAATTTTTGCCGTGTTTTTGGTGACAATTTTGTTTTTTCCCCTGGAATGTATGCACCAAGAGGGAATTAAATAAAAAAAAAAAAAAAACGCCATAGCAGTTATACTGGGTGGGGGAAAAAAGAAAAACCAAGAGAAAGTAGTATGAACAACAAGAACGGAAAATGATTTGAAAATGATGATTCAATTTAAAAATAACGACTTTGACTTTTGAAAGCACCCTTATATGATCGATTGAAGACATGAACCAAAAACCAAAGCATTTTGCGAGTTTCGTTATTATGGCTCAAAAACAAGCACCTTCTTCTGCTTCTTTTATGTCAAAATACAGTTATGATGTTTTTCTTAGTTTTCGTGGTGCAGATACACGTTTTGGTTTCACTGGTAATCTTTACAGTGCTTTGAGTCAAAGAGGAATCTTTACCTTCATCGACGACGAAGCTCTCAGAAAGGGAGAAGAGATCACACCTTCTCTTCGCAAGGCAATCCAAGAATCCATGATATCCATCATCGTTTTCTCCAAAAACTATGCTTTCTCAGCATTTTGTTTGGACGAACTTCTCCATATCATTGAGTGCCACAAAAATCAGAACATGTGGATTTTGCCAGTGTTTTATGACGTAGAGCCATCACAAGTGCGACATCAAACAGGGAGTTACCAAGAAGCATTTGCAAAGCATGGTGAAAGATTCAAAGATGACATTCAGAAGCTTCAACAATGGAGGCTGGCTTTGCGTCATGCTGCCGATTTGGCTGGTTTTCCTTTCAAAACTGGGTAAGTCATCTCTGTTACAAATTATCAGTATATAGCAATAGTCTCTCTGATTTGCCAAAATGAATGTGACAGTGGTTTGATTGCTCTTGTA


Gene Sequence:
>Vu_16707(+)
ATGAATTGTAGTAAAGAGTATGAGTCTGAGATAGTGAAAAAGATCACAGAAGAGATCTCCACTAAGCTTAATCGACCTCCCTTGCATATTGCTGATTATCCTGTTGGTTTGAAAGTTCGGATGCAACAGATACAAAAACTCATGGGTGGTGAGTTTGATAAGAAAGTGACTATGCTTGGGATTCATGGAATGGGAGGAATAGGAAAATCAACTCTTTCACGTGCGATGTACAACTTGATGGCACATCAATTTGAAGCTTCGCACTTTCTTGCTAATGTAAGGGAAAAATCAGATAAGGATGGTCTGGTGCATATCCAAGAGACAATGCTGTCTGAGTTGGTGGGGGAAAGAAATATCAAGCTAGGAGATGTGCATCGTGGAATTCCAATACTACAACACAGACTTTGTGGGAAAAAGGTCCTCCTTGTGCTTGATGATATTAGCAAAAAAGAACAATTGCATGCAACTGCTGGAGGACTTGATTGGTTTGGCCCTGGTAGCATCATCATCATAACAACAAGGGATAAGCATTTGTTAGATGTTCATGGAGTTCAAAAACAGTACATGGTTGGTGGAATTAACTTTATGGAAGCCCTTGAATTGTTTAAGTGGAATGCTTTCAAAAACAAAGAAGTTGATCCATGTTACAAGGAAGTCACAGAGCGTGCAATGTATTATGCCAATGGCCTTCCATTGGCTTTGGAAACGATAGGCTCGAACTTGTTTGGCAAAACCTTGGATGAATGGGAATCTGCGTTAGAAACTTATGAGAGAATTCCAAATAGAGATGTTCAGGAAGTTCTTAAAGTTAGCTATGATAGTTTGGATGCTTATGAGAAAGAAATATTCCTTGACATAGCTTGCTTCTTTAGAAGATGCTCTCTTGGATACGTTACAGATAAGCTTGAAGCAAGAGGATTTCCTCCAAAATTTGGTCTGAGAGTGCTAGAAGAAAAATCTCTCATTAAAATTCGGGAATGTCCACATGAAACTGTGACAATGCATGACATGATTCGGTGTATGGGAAAAGAAATAGTTAGACAACAAAAACCTCTGCCTCACAAACGGAATAGGATATGGTTTTACGAGGACGTTGTTTGTGTGTTGGAGAAAAACATGGTAAGAGTCCTATTCCTTTCCGTTTCTTGTATTACATCATGAGTTGAATCTGTACACATTTCATGATTCTTAACTCTCGATAGTAAGAGCCAACAAAGCATTTACATTTTGTGAATTCTAAATTTTATGGCTCCTTTTCTGCTTTTGGCCTGAAAGGAAAATGATAAAATTGAAGCGGTGATGTTGGAGATGCCAGAACACCAAGAAGAAATGCAATGCACTCCAAAGTTTGGAAAAATGAAAAGCTTACGGATGCTTATTATAGAAAAGAAGGTTAGCTTTCTTGGAAGCCCTGCTACTCTGCCAAACAGTTTGAGAGTGCTGGAATGGCGTGGATATCCTGCAACTTCTTTACCGAGCAATTTTCATTTCAAGAATCTTGTCATACTCAACTTGTCACACAGTTACTTTGGATGGTACAAACCACTACAGGCATGTACAATTTTATTCGTCATCTAAAATTAATTTTAGGTTTTGGATTAACACTTGATTCTTCAAAAAAACCAAACTAATAACCGTAGACTTGTTATTTTGCAGAATTCAAAGGTTTTGAGACACTTGATTGTCGTAGGTTGTAAGAATATTAGACGAATACCTGACATCTCTGGTTTCCCCAATTTGACAAAACTTTGTGTTCGTGAATGCACAAATCTGTTTGAGATTCATGATTCAGTTGGATCTTTACTTCATCTTAAAGAGTTTTGTGCTGAAGGATGTACCAAGCTCACAATTGGTCCAAGTCGCATAAAGTTGATATCTTTGGAGCATCTGTGCTTTCGGGGCTGCAGCAGTCTTGTCATGTTTCCAGAAGTATTGGCTCCAATGCACAAACTAAAGTACGTTGACTTGGGAGGAACTGGCATAAGAAATCTGCCACCATCAATGCAAAATCTTAAGGGTATTAAAGTATTGTCCATGGGGAAAGGCCAAATGCTTGAAATTAATGAATCGTCCAATTTCTTTCAAAACCTGCCAATGTTCTTTCCTAATTTAGAAACATTATATTTACAAAACTTAGACATTACAATCCTTCCTGCCAGCATTGAAGAATGTCACTCTTTGAAATTTCTGCACGTCACCAACTGCAAGAAGCTTCAAGAAATTAGAGGACTTCCATTGAATATTAATCAGTTCTACGCAGCAAACTGTTCTGTTAAAGCCAACTCTTTGATATTAAAACTCAGGCAGGTGGGTGTGTCTATCTTCTTTGAGTGATTCCATTAACTAGCTATGACTTTCTTTTTCCAAACTCACGATGCATATAACATGACCCGTTTCACAGGCCATTGATTGTGGTGCAATGGGAATCTGTGTTCTTCCAGGTCGGAAAATCCCAGAATTGTTTGACCACTCTAGCAGGGGAAACTCTGTAAGTTTTTGGTTTCGTAAAGAATTGCCCACTCTGGCTGTGTGTGCTATTATTGGAGTCTGGGATAATGTCAAGCCTCCTTTCGTTGCCTTCTTTAGGTTCGTTGTTGGAGTAGAAAAGAATATTTATAAGTGTGTTTGTTGTTTCCGTTGTCGTAATATACGTTGGACAACTGAGGATAGTCACATAATTATACTCAACTCTCGAAATGATTTTCAACATACGTTGAATACGGATATTCAGACAGTGCTTCTGACGAATGAGTGGATTCCTGGGAAAATACTGTTGACGATACGTCCAAAAAGTGATTTAGGTAAGTCGGGAGAAATCAGAAGGACAGGAGTTTATGTAAATCGAACACTTAGTAGCATGGAGGATGTTCGATTCGAAGATCCTTATGATCTCAATAAAGCAAGCACTATGGAAAATAAACTTGTGTTGCTTGGTGAGGCATCTGATACACAACAACAAGCACAATCCTCTGCTTTATTCAACCTCACAACCTCATTAGAATCTCTTATTGGTGAACAACCTTTGAATTATGAGTACAACAATTCATATTCAAAAGAATCGGCATCCACTGTTGACTCCAATAACCAAGGTAAAATGTACTTTGTCCTTCCTTTCTTACTCTTTGATCAAATTACTTCTGCTTCTATTGATATTATCCTTTGGTTCTGAAGGAGTACTTGTAGATGATCAACCAATATTAGCTCCAAGTTCTGCAGAGACGCAAAATGCTGAGGCCAAAAGAGAAATGGCACAACTGATATCGGAAGTTTCAAGTGAGTTCACAGCTCAAGTAAGTATGAAAATTGAGTCAACAGCATCCCAATCACCTAAAGTTGATGAAGTAGAAGCAGGTTTGGAAACTCAGAATCAGTTCAGAAATACTATGGTTTTGGAAAACCAGATACACCAAAGGCTGACCAGGATTAAGAAAATGAAAGAAGAATTAGGAGAGAAATTCAGTGCTATTAAAGCCGACATCTCTGCCATTGAAGCTAACAACTCTTCCATTAAAGCTAACATCTCAGACATTAAAGCTATATTTTTGCAGATTGATCAGAGGTACAACAATTGA

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