Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16612 LG4 26729683 26733830 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   shoot system morphogenesis, shoot system morphogenesis, phyllome development, phyllome development, flower development
Cellular Component   located in   nucleus
Molecular Function   enables   molecular_function
SNP Position Effect Amino acid change
C/T 26729758 missense_variant p.Gly983Ser
T/A 26730059 synonymous_variant p.Thr882Thr
G/T 26730060 missense_variant p.Thr882Lys
C/T 26730304 missense_variant p.Gly801Ser
A/C 26730340 missense_variant p.Leu789Val
T/C 26730400 missense_variant p.Ile769Val
G/T 26730812 synonymous_variant p.Pro631Pro
C/T 26731003 missense_variant p.Gly568Arg
A/G 26731061 synonymous_variant p.Val548Val
G/T 26731178 intron_variant
A/G 26731199 intron_variant
A/G 26731315 intron_variant
A/C,* 26731330 intron_variant
A/G 26731337 intron_variant
A/G 26731376 intron_variant
T/G 26731458 intron_variant
A/G 26731565 intron_variant
C/A 26731621 intron_variant
G/T 26731632 intron_variant
A/T 26731644 intron_variant
G/A 26731773 intron_variant
T/A 26732126 missense_variant p.Glu447Val
T/A 26732173 synonymous_variant p.Gly431Gly
C/G 26732226 missense_variant p.Val414Leu
A/T 26732281 synonymous_variant p.Leu395Leu
T/A 26732352 intron_variant
A/T 26732353 intron_variant
A/G 26732363 intron_variant
G/A 26732425 intron_variant
G/A 26732610 intron_variant
T/C 26732826 synonymous_variant p.Gly335Gly
T/A 26733038 missense_variant p.Arg265Trp
C/T 26733117 synonymous_variant p.Gln238Gln
G/A 26733288 synonymous_variant p.Gly181Gly
T/A 26733375 synonymous_variant p.Pro152Pro
G/A 26733385 missense_variant p.Ser149Leu
T/C 26733498 synonymous_variant p.Arg111Arg
G/A 26733636 synonymous_variant p.His65His
T/C 26733741 synonymous_variant p.Gln30Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16612.1
MGDKGDTTKKQQQQPQQPQQQQPQSHLHHQHQQQQQQTQQQQTQQISSSPKAPREEAITEVRPIHHHQQLSPVVVVTGAPPFISSPLYVSSGASSSPYEPQFETLNPKRPRYSGQWKQLLPSPPAQPKQSQMAMLPTTESSPSPTTHTSSNPQQPQTQTASSSDTSSSPTHSLPLLSGGSGQEGSKQEGEQVHQQLRKGKYVSPVWKPNEMLWLARAWKEQYQGGGGGGSESSSRAEQQHQAELGITRGKTRADKDKEVAEFLKRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQIGKSYFRLSPYERKLHRLPASFDEDVFEELAQFMGSRMRSSQGRAGSSFVSGDEARTALAAARALPPPSRPFKDDETPLSGTTKQLAITSGVEPFFHGSRGGLLGLDTLVDVSGSSSSKELRRIGKIRMTWEESVSLWAEEGEIHRGRVRLQSSSFLNADELTCFDEAMVPCPMEYFEDGPLKGFSVDRFVSGQQVKVFGRRKSSPASDSSGFAERVQLPSKALPIRSIATLDFRDPTEYYMECLLRAFPQTLPSLYELRRHLQEPPPEDLRFPLRRDVYEELPQGKELFFTTTPEPLDCRTIMYDIVGPIIRIHNPSLSLAASSSRDSFIPLWDECINRVIQKFCPEELTLIRKPTSPPPESTNQSMLQDQWPNVTGFVNNYCLWRGEETHQLKESQPNPSTTLVGKLMWTYMDLPYILGYYAVANTVTFCALSRSQDGIINRTDLHEVNLTTPVEKLKALVPCFRIGLLLALLSKRCASISNCKGFTYSDFERVCYGNGVVTEVTPSTCTRVFMEKRKWMAVKEVYEILDHRIPHAEVLVGFSERELGLSFKPRGCRVKPGNCEELVEALKFVTKAMVALHDLSFMHRDLKWEKVMRRRDREEWFVCGFDEAAGAPELKGHVSGTRGGHAPEMERGLHGVKVDVWGVGNLIRTCGLGGVPKMLRELQNRCMEQNPEQRPTAADCYHHLLQLQSSLSAAAGGVMMM*


CDS Sequence:
>Vu_16612.1
ATGGGCGACAAGGGAGACACAACCAAGAAGCAGCAACAACAGCCTCAGCAGCCTCAACAACAGCAACCTCAATCTCACCTTCACCACCAACACCAACAGCAGCAACAACAAACACAACAACAACAAACTCAGCAAATTTCATCTTCTCCTAAAGCCCCACGTGAGGAAGCTATCACAGAAGTTAGGCCAATCCACCACCATCAACAATTATCACCGGTTGTGGTTGTGACTGGAGCACCTCCTTTCATTTCTAGTCCTTTGTATGTTTCAAGCGGTGCAAGTTCTTCACCCTATGAGCCTCAGTTTGAGACGCTGAACCCCAAGAGACCCAGATACAGTGGACAATGGAAGCAGCTTCTACCTTCCCCTCCTGCGCAGCCAAAACAGTCCCAAATGGCCATGCTTCCCACCACAGAATCAAGCCCTTCACCAACCACGCACACTTCATCAAATCCACAACAACCCCAAACACAAACAGCTTCTTCATCAGACACTTCCTCGTCTCCAACTCACTCTCTCCCATTGCTCTCGGGAGGTTCTGGCCAAGAAGGGAGCAAGCAAGAGGGAGAGCAAGTTCACCAGCAACTCAGAAAGGGGAAATATGTGAGCCCAGTTTGGAAGCCCAACGAAATGCTGTGGCTGGCAAGGGCTTGGAAGGAACAATACCAAGGAGGCGGTGGCGGTGGATCTGAATCTTCTTCACGGGCAGAACAGCAACATCAAGCGGAATTGGGAATCACAAGGGGGAAAACTAGGGCTGATAAGGATAAAGAAGTGGCTGAGTTTCTCAAGAGGCATGGGGTCAATAGAGATGCTAAAACTGCAGGCACTAAATGGGATAACATGTTAGGTGAGTTCAGAAAAGTATACGAATGGGAAAGAGGGGGTGAAAGGGAACAAATTGGGAAGAGTTATTTCAGGCTTTCACCGTATGAGAGAAAGTTACACAGACTCCCGGCTTCTTTTGATGAAGATGTTTTTGAAGAACTTGCACAGTTCATGGGATCCAGAATGAGATCTTCTCAAGGCAGGGCAGGTTCATCTTTTGTGTCAGGAGACGAAGCTAGAACGGCTCTTGCTGCTGCAAGAGCTCTTCCACCACCATCTCGACCCTTCAAAGATGATGAAACCCCTCTCTCAGGTACAACGAAACAATTGGCCATAACAAGTGGGGTTGAACCTTTCTTCCATGGCTCAAGAGGGGGTTTATTAGGGTTAGACACACTCGTGGACGTTTCAGGGTCTTCATCATCTAAAGAGCTCCGTAGAATAGGGAAGATAAGAATGACATGGGAGGAATCAGTGAGTTTATGGGCAGAAGAAGGAGAAATACATAGAGGGAGAGTGAGGCTTCAATCTTCTAGCTTTCTGAACGCGGATGAACTCACTTGCTTTGATGAGGCCATGGTGCCTTGTCCTATGGAATATTTCGAAGATGGGCCTCTGAAAGGTTTTTCTGTTGACAGATTCGTTTCCGGACAGCAAGTCAAAGTTTTTGGCAGAAGAAAGTCTTCCCCAGCCTCAGATTCTTCTGGTTTTGCTGAAAGAGTCCAACTTCCCTCCAAAGCACTTCCCATTAGATCGATTGCTACATTGGATTTTCGAGACCCAACAGAATACTACATGGAATGTCTCTTACGTGCGTTCCCACAAACCCTCCCAAGTCTCTACGAGTTAAGGCGCCACCTACAAGAGCCACCACCGGAAGACCTACGTTTTCCTCTCCGAAGAGATGTGTACGAGGAACTTCCCCAAGGGAAGGAACTCTTCTTCACAACCACACCCGAGCCCTTGGACTGCAGAACCATAATGTACGACATCGTGGGCCCCATTATCCGCATCCACAACCCTAGCCTCTCCCTCGCTGCATCATCCAGCCGCGACTCCTTCATCCCCCTCTGGGACGAGTGCATCAACCGCGTCATCCAAAAGTTCTGCCCCGAAGAACTCACCCTAATACGAAAACCCACGTCACCGCCACCAGAATCGACGAACCAGTCCATGTTGCAAGACCAATGGCCCAACGTAACCGGTTTCGTCAACAATTACTGTCTCTGGAGAGGCGAAGAAACGCACCAGTTGAAAGAGTCGCAACCCAATCCATCAACGACGTTAGTAGGGAAACTCATGTGGACATACATGGATCTTCCGTACATTCTCGGATACTACGCGGTGGCCAATACTGTGACGTTTTGCGCGCTGAGTAGGTCGCAGGATGGAATAATCAACCGCACCGATTTACACGAAGTGAACTTGACCACCCCGGTGGAAAAGCTGAAGGCTTTGGTTCCGTGTTTCAGAATAGGATTGTTGTTAGCGTTGTTGAGTAAGCGTTGCGCGAGTATAAGCAACTGCAAGGGATTTACTTACAGTGATTTCGAGAGGGTTTGCTACGGTAACGGGGTGGTGACGGAGGTGACGCCGAGTACGTGCACGAGGGTGTTTATGGAGAAGCGCAAGTGGATGGCGGTGAAGGAGGTTTATGAGATTCTGGACCACAGGATACCGCATGCAGAGGTTTTGGTGGGTTTTTCGGAGAGGGAACTGGGGTTGTCGTTTAAGCCAAGAGGCTGCCGTGTGAAGCCGGGAAACTGCGAAGAGTTGGTGGAGGCATTGAAGTTCGTGACGAAGGCGATGGTGGCTTTACACGACCTGTCGTTCATGCATAGGGATTTGAAGTGGGAGAAGGTGATGCGGCGGAGGGATCGGGAGGAGTGGTTTGTGTGCGGGTTTGACGAGGCGGCGGGAGCACCGGAGCTGAAGGGACACGTGTCAGGGACGCGTGGTGGGCACGCGCCGGAGATGGAACGGGGGTTGCATGGGGTGAAGGTGGATGTTTGGGGAGTGGGGAACTTGATTAGGACGTGTGGGTTGGGAGGGGTGCCGAAGATGCTTAGGGAGTTGCAGAATCGGTGCATGGAGCAGAACCCGGAGCAGAGGCCCACGGCGGCGGACTGCTACCACCACCTGCTGCAGCTGCAGTCGTCGCTGTCAGCCGCCGCCGGGGGAGTCATGATGATGTGA


Promoter Sequence:
>Vu_16612::LG4:26733830-26735830(-)
GTCCAAAATCTCCATCATATCAGTGGATGAAGAGTGAATACTATGGTCAAGATTTTTCTTGTTTTTTTTTTTCAATTTTCTGTTAGTATAGTTTGAGAAAAATAAATAAAATAGAAAAAGTATTTTTTTTTTAAAAAATATATTAATAAAGGAATTGAGAGAGGTTTTTTTTTTCCAGAATTCATTGACATTGTTCTTATTAGATTTTAACCTTTACTCCTTATATGACTTAAATATAAGTTTGTAGGGGGTATTATCTGCTTATAATATTTGTACATAGAATGTTTAATAGTTAAAGTTCTCACTTGAAGGGAAGAAATATTGAATATATAAAATAAATAAATAAAATGAAAAAGTGGGAAAAGTGAAAATATAATCATAAAAAAATAGTGGGATTATAAAAATGTAAACATAATAGAATATAAGAATGAATCCACTAGGCTTAGTGATAGGGAAATTACATATTATGCACAAGATCATGGATTTACATTTGATAGTCAATGTCTCCTCATTATAAGAAAAAAGTGCAATCAATTTTAGAAAATAGAAAAATGCAATGTTGAAAGACATTTTTCACACAAAATTGTGCAAAGTGAAGTGAAAAAAAAAGAGCATATTTCCGTGCAATAGTTAAAGTTAGAAATTGACAAAGTGTGCTAAGTGGGGTTTGAACCTAAAATTCGTACTCAAACACCTATACAATTAATACAAGGACAGAGACACTTCACTTGTTCTAATAAATTGAATTAGTACAGCTTAAACTTCATTTTATTTGTTATATGAATTCAAAAAGACATAAATGTGAAACTCAAGAAAAGAATACAAACACACTAAATTCTCAATTCCCAGCATGGTAGAAGCTAGCTTAGGCTGAACTATTCACAATGTGTTATTTTTTATTTGAAGCAGTGAAGGAGTAAAACGATACCCAGTAACAGTACTTGCTTGCAATGGAAGAAAACCCTAGAAATGGAAATGAGACAGGTGGAGGAGAAAATTTTGTATTTGAAAAAAAGAAAAAGAAAAGGGAAAAAAATAGGACAAAGCCAAAATAGTCATAAGCAAAGTCTCGTATTGGGGCAGAGGCATCGATTCGTGAAGTCTCCATCTTACTATCACAAACCCCAAAACAAACAACACTCACTAATTATCCCATTTTTCCATAAACCTCACTCGCACACTCAAGTCTCCACTCCCTCACTCTGCGCGGGAACGAACATCGTTGTCTCTCAAACATCACAAAAAACATAACAACAAACATACATTCAATGATGTTACTTAACCAATAACTTCATCCCCAAAACACAGCATAAATGCAAAATTCTAAAAGTAAAAAAATGTAAATTCTTCTTAGAGCCGCATTTTTCAGAGCTAGTACAATCATCACACCCCTCTCTAATCATGCACTTACACTACACCACACACCACACACCACACTACACTACACCACACACATCACTGCATCCCTTTCTCTCTCTCTTTAACTTGTCAAGAATGACACATCAAAACAACAACGGTGCTGCTTCTACACTTAATTACAAAAGGTTAATGATAATAAAAGAAAAGGGGAAATAAAAAACACAGACCGAACCGTCTTATTCACGGCAGTTCCCACACACTCTCTTGACTTTTTAGTTCTTTCTCCTTTCTGTTGCTACTTTTCATAGTTTCGGATGTTTGCTTTTGCTTGCTGCGATCCTCTCTACTTTGTGACTTTCCCTTTTGAAGATATGGCAGAAGTGCCATCATCCATCTATCAAGGCAACAAGCGCATTCAAAACCCTTTTGAGAACATGTCACACCCACAACTCCAACAAATAGAAAAAAACAAACACCCCCATTAATTGAAAAAAACTTCAACCCACCTAGTTCAACTTCAATGCAAGCATAGCCACCTCCTTGTCACTACCACTACCACACTTGTTCCGATTCCTAACTTCCTTCTTTGTGTCTCATTCTCTTGTCAAAAGCCCTTCTTTGATAGGGCCCATTACTCCATA


Gene Sequence:
>Vu_16612(-)
ATGGGCGACAAGGGAGACACAACCAAGAAGCAGCAACAACAGCCTCAGCAGCCTCAACAACAGCAACCTCAATCTCACCTTCACCACCAACACCAACAGCAGCAACAACAAACACAACAACAACAAACTCAGCAAATTTCATCTTCTCCTAAAGCCCCACGTGAGGAAGCTATCACAGAAGTTAGGCCAATCCACCACCATCAACAATTATCACCGGTTGTGGTTGTGACTGGAGCACCTCCTTTCATTTCTAGTCCTTTGTATGTTTCAAGCGGTGCAAGTTCTTCACCCTATGAGCCTCAGTTTGAGACGCTGAACCCCAAGAGACCCAGATACAGTGGACAATGGAAGCAGCTTCTACCTTCCCCTCCTGCGCAGCCAAAACAGTCCCAAATGGCCATGCTTCCCACCACAGAATCAAGCCCTTCACCAACCACGCACACTTCATCAAATCCACAACAACCCCAAACACAAACAGCTTCTTCATCAGACACTTCCTCGTCTCCAACTCACTCTCTCCCATTGCTCTCGGGAGGTTCTGGCCAAGAAGGGAGCAAGCAAGAGGGAGAGCAAGTTCACCAGCAACTCAGAAAGGGGAAATATGTGAGCCCAGTTTGGAAGCCCAACGAAATGCTGTGGCTGGCAAGGGCTTGGAAGGAACAATACCAAGGAGGCGGTGGCGGTGGATCTGAATCTTCTTCACGGGCAGAACAGCAACATCAAGCGGAATTGGGAATCACAAGGGGGAAAACTAGGGCTGATAAGGATAAAGAAGTGGCTGAGTTTCTCAAGAGGCATGGGGTCAATAGAGATGCTAAAACTGCAGGCACTAAATGGGATAACATGTTAGGTGAGTTCAGAAAAGTATACGAATGGGAAAGAGGGGGTGAAAGGGAACAAATTGGGAAGAGTTATTTCAGGCTTTCACCGTATGAGAGAAAGTTACACAGACTCCCGGCTTCTTTTGATGAAGATGTTTTTGAAGAACTTGCACAGTTCATGGGATCCAGAATGAGATCTTCTCAAGGCAGGGCAGGTTCATCTTTTGTGTCAGGAGACGAAGCTAGAACGGCTCTTGCTGCTGCAAGAGCTCTTCCACCACCATCTCGACCCTTCAAAGATGATGAAACCCCTCTCTCAGGTTTGTAGATAGTTGAAGCGTCAAAATGGGAAATCACAATATCTTGCTTTTTAGTTTTATTTCAGTTCCACTTTTCCTTCACCTAATCTTCAATGCACTTTGCTAACGTAATTTCACACATAGTAAAGTTTCTGTTCTTAGTTTCTTTTGTATCTTTTTCCCTTTTATGGAATGCACAGTGATTCTGATAGATTCATGAAGGATTCAAAGGAACAGTATTTTTCATTCGATTCTGACTTTTGCGTCTACAAGCACTGTTTCCCACCCTTATAGGGAAGAATAATGCATTAGAAAATGAGAAATGAAAACGTTATCGATTTTCCAAGTTTGTCTTTTTATTCACCCACCTTGTCATTGTTGCAGGTACAACGAAACAATTGGCCATAACAAGTGGGGTTGAACCTTTCTTCCATGGCTCAAGAGGGGGTTTATTAGGGTTAGACACACTCGTGGACGTTTCAGGGTCTTCATCATCTAAAGAGCTCCGTAGAATAGGGAAGATAAGAATGACATGGGAGGAATCAGTGAGTTTATGGGCAGAAGAAGGAGAAATACATAGAGGGAGAGTGAGGCTTCAATCTTCTAGCTTTCTGAACGCGGATGAACTCACTTGCTTTGATGAGGCCATGGTGCCTTGTCCTATGGAATATTTCGAAGATGGGCCTCTGAAAGGTTTTTCTGTTGACAGATTCGTTTCCGGACAGCAAGTCAAAGTTTTTGGCAGAAGAAAGTCTTCCCCAGCCTCAGATTCTTCTGGTGCCAAACCAAACCTGTTTCCTTAAATTTAACTACGTTGCCTTGTTTTACATATTCTAGGATTCTATCTAACTGTTTCATTGTCCCTCTTTCCCAGGTTTTGCTGAAAGAGTCCAACTTCCCTCCAAAGCACTTCCCATTAGATGTGAGTGCTCTCTTTCTCCCAGTGGTCACTACCCTCATTCCATGTTCGAGCCAGTACTCTCTTAATAACTTCTAATTTGATATGTTAAATTTAGAAAATAGAAGCAAACTTTCAGTATTAGCAACGAAAGTGTACATTCCGACCTCAATCATTCTTCTTTTTTTTGAGAACTTATTATTATCTTTCCTATTTGATTCATCATCCTATTTGAGCTTATTTCATGTTCTTAACATTATCAAATATACTTTTTCTTTTAATTTAAACATTGACAAACCATTAAAAACATTAATTTAATTAATAAATATCGTAGAACAGTATCAGTTTTGTCGTAGGTTATTTAATTGTTTCTCAATGCAGTTAGATAACCCAAAAGTAATAAAGCAATTTAACTAGTCCTTAAAGCATTGAATGGTTATTAACTTGTTTGAAACACTCCTTTTTCATTGTAATTTAGAATTTACAGTGTTTAGCTGTATTAAAGATCTGTCTGGGACATGCTTTTTATTTGCTTAACTTCACTAGGGAATGCTTAAAGGTAGTTTAAGAATCAGTGTGGAAGTTTAGTTTTAAACACACTGAAGGAGTAGTATTTCCAAGTTTCTTATAGTTGCATTGTGATGTGAAATTGATCAGAGAATTATTATACTTTGTGTTGGTGTTGCAGCGATTGCTACATTGGATTTTCGAGACCCAACAGAATACTACATGGAATGTCTCTTACGTGCGTTCCCACAAACCCTCCCAAGTCTCTACGAGTTAAGGCGCCACCTACAAGAGCCACCACCGGAAGACCTACGTTTTCCTCTCCGAAGAGATGTGTACGAGGAACTTCCCCAAGGGAAGGAACTCTTCTTCACAACCACACCCGAGCCCTTGGACTGCAGAACCATAATGTACGACATCGTGGGCCCCATTATCCGCATCCACAACCCTAGCCTCTCCCTCGCTGCATCATCCAGCCGCGACTCCTTCATCCCCCTCTGGGACGAGTGCATCAACCGCGTCATCCAAAAGTTCTGCCCCGAAGAACTCACCCTAATACGAAAACCCACGTCACCGCCACCAGAATCGACGAACCAGTCCATGTTGCAAGACCAATGGCCCAACGTAACCGGTTTCGTCAACAATTACTGTCTCTGGAGAGGCGAAGAAACGCACCAGTTGAAAGAGTCGCAACCCAATCCATCAACGACGTTAGTAGGGAAACTCATGTGGACATACATGGATCTTCCGTACATTCTCGGATACTACGCGGTGGCCAATACTGTGACGTTTTGCGCGCTGAGTAGGTCGCAGGATGGAATAATCAACCGCACCGATTTACACGAAGTGAACTTGACCACCCCGGTGGAAAAGCTGAAGGCTTTGGTTCCGTGTTTCAGAATAGGATTGTTGTTAGCGTTGTTGAGTAAGCGTTGCGCGAGTATAAGCAACTGCAAGGGATTTACTTACAGTGATTTCGAGAGGGTTTGCTACGGTAACGGGGTGGTGACGGAGGTGACGCCGAGTACGTGCACGAGGGTGTTTATGGAGAAGCGCAAGTGGATGGCGGTGAAGGAGGTTTATGAGATTCTGGACCACAGGATACCGCATGCAGAGGTTTTGGTGGGTTTTTCGGAGAGGGAACTGGGGTTGTCGTTTAAGCCAAGAGGCTGCCGTGTGAAGCCGGGAAACTGCGAAGAGTTGGTGGAGGCATTGAAGTTCGTGACGAAGGCGATGGTGGCTTTACACGACCTGTCGTTCATGCATAGGGATTTGAAGTGGGAGAAGGTGATGCGGCGGAGGGATCGGGAGGAGTGGTTTGTGTGCGGGTTTGACGAGGCGGCGGGAGCACCGGAGCTGAAGGGACACGTGTCAGGGACGCGTGGTGGGCACGCGCCGGAGATGGAACGGGGGTTGCATGGGGTGAAGGTGGATGTTTGGGGAGTGGGGAACTTGATTAGGACGTGTGGGTTGGGAGGGGTGCCGAAGATGCTTAGGGAGTTGCAGAATCGGTGCATGGAGCAGAACCCGGAGCAGAGGCCCACGGCGGCGGACTGCTACCACCACCTGCTGCAGCTGCAGTCGTCGCTGTCAGCCGCCGCCGGGGGAGTCATGATGATGTGA