Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16512 LG4 25265675 25265977 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A,* 25265691 missense_variant p.Ala96Val
T/G,* 25265694 missense_variant p.Tyr95Ser
T/C,* 25265701 missense_variant p.Thr93Ala
C/A,* 25265733 missense_variant p.Cys82Phe
C/T 25265743 missense_variant p.Glu79Lys
C/A 25265764 missense_variant p.Ala72Ser
C/A 25265768 synonymous_variant p.Ala70Ala
A/G 25265772 missense_variant p.Val69Ala
G/A 25265777 synonymous_variant p.Asp67Asp
A/C 25265792 synonymous_variant p.Val62Val
A/G 25265793 missense_variant p.Val62Ala
T/A 25265830 missense_variant p.Arg50Trp
G/A 25265843 synonymous_variant p.Pro45Pro
A/G 25265876 synonymous_variant p.Ser34Ser
T/A 25265878 missense_variant p.Ser34Cys
C/T 25265883 missense_variant p.Arg32His
C/T 25265890 missense_variant p.Val30Met
G/A 25265894 synonymous_variant p.Tyr28Tyr
T/A,C 25265895 missense_variant p.Tyr28Phe
G/T 25265905 missense_variant p.Pro25Thr
C/T 25265912 synonymous_variant p.Gly22Gly
A/G 25265918 synonymous_variant p.Asn20Asn
T/C 25265935 missense_variant p.Arg15Gly
T/C 25265962 missense_variant p.Ser6Gly
G/A 25265963 synonymous_variant p.Asn5Asn
T/C 25265967 missense_variant p.Asn4Ser
C/G 25265969 synonymous_variant p.Ser3Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16512.1
MRSNNSTTCVASSTRASNGNGGCHPVYYGVRRRSSGKWVSEIREPRKPNRIWLGTFATPEMVVIAYDVVALALKGKDAELNCPNSASSFPVPTSYAACDI*


CDS Sequence:
>Vu_16512.1
ATGCGTTCGAACAACAGTACCACATGTGTTGCATCAAGCACCAGAGCCTCTAATGGTAATGGAGGGTGCCACCCTGTGTACTACGGAGTGAGGCGTAGGAGTAGTGGAAAATGGGTTTCTGAAATCCGTGAGCCCAGAAAACCTAACAGGATTTGGTTAGGGACATTTGCCACCCCTGAAATGGTTGTTATTGCCTATGACGTGGTAGCGCTTGCTCTTAAGGGGAAGGATGCCGAACTCAACTGCCCTAACTCCGCCTCTTCTTTTCCCGTTCCTACTTCATACGCTGCTTGTGACATTTAG


Promoter Sequence:
>Vu_16512::LG4:25265977-25267977(-)
TTGATGTGCATAAAACAGTAACGAGTGTAAGGAATAGAAAAGTTGACACACTGGATTTTTATCCTGGTTCGATTCAAAAGAATCTACGTCCAGTTGTTAATCACTATAAAGAGTGATTAACGATTTCACTAAAATCAGTTTCAGCAAAATACAATTAAGAGTGAATAAACAAACCGAAATATAAAACCTTCCTTCGACCAACGAAATGGAAGCCAACAATCTACACTTTCCTTCAACTCTGGAACAGTGCAGAACAGTTCTTCCTTCGACCAACGAATCGGAAGAACAATAGCGTTGCCAACTCGAAGAGAATCGCTCCGACCTTTGACCCACAAAGCGAGAGCTTCTCCTTTTCACGAGACTAGGCAGTGCAATGAACTAGCTTTTGGAACTTCCTCAGATCACACTGTATTCTCAAAAGCTCAGTAGTGTTTCTAAGAGTTTTGGAACTCATCTATATAGCCCACTGGTCTAAAGTTTGCAAAGATGAATTATAACTGCCGCAGATAATCGATTATTGTTAGTGATAATCGATTATTCTAGTCCGTTACAGGGTTTTCAAAAAGTGATAATCGATTATCCTGAGGAATAATCGATTATTCTAGAGACTTTTGGCAGTTCTCATCAGAACTAGTGATAATCGATTATTTGGAGTAATAATCGATTATTCTAGAGCAACGAGGTTTTTCAGAAGGGCTCAGGATAATCGATTATAGCTTCTAATAATCGATTAAATACGTAGCAGTTCTAACAATACGAATTTTTCTAAGTATTACACGTTTAAGGCTTTTTCTAATACATTTATAATCTACAAATTGCTTTTAAAACAACTATAACAATGTATCATCTATCAGCATCATCAAAATCATTTATCTTCAAATTTACCAATGCTCTTCATTGGTAACACATTCTTCTTCATGCCATCAACTCCTTCTTCGTCCTCATCTACAACCCTGCAAATCATAAAGAACAAGAAAATTGGACAAAAAAGATACTGCAATACTATCCTCAGGCGTTGTTGTTCATCGTCAATAGAAGAAACCGACGTTGCTCTTTGTCGTCAATAGAAGAAACCGAACATATTACTCTTTGAGCACTAGCTGCGCAGACACCTCAGGGCACCTACAGTAGCAGTAGTAAAAGCATATTCAACTATTCTTCTTCACGTCTGCACTTTTTAATTTTAACTTCTTGAAATATTAAACAGATATACACACCAGGAATTCTATAATATGTTGAGGGTATACGTGACATTTCAGTAACAATCCCTCCAAATCTCTTCCCTTTCGCATGTGATGAAAAACCATGGCATCCCACAAATCTGTCTTCACCCGTCTTCGTTTTTCCTCTCAACCGAACATGACCCGTCTTGTATTTCATCGCTCGCATTCGCCACTGAACAATAAAACCTGTTCAAGCGAACACTGCGTAAGGGTGTGTTTACTTGAGATGATTTGGGGGAGATGATTTGGAGGAGAGTGATTGAATAGATTTGAGGGGATTTGAAGGTAAATTTTTTGTTGTTTGTTTGAGTGAATTTTGAGGTATTTGAGAGTGGATTTGGAAGTAAAGTTTGTGAGAATTAGTGTAAGATTTGATTGATGTGACAGATTTAAAAAATTTGTTTAATTGATAAAAACATAAAGATTACCAAAATGCCCAGTCATTAAAATAATATAAAATGATAATTGTTAATGTTATATTTAATTGTAAAAATATTTATAAAGATTAAAAAATTAACATTAATTATTCAAATTAATTTTAATATTGTAAATTTTTTTATTATAGTAAAATAATTTTTTTAATATTTTTAATTGTAATATTGTAACATTTATTTTTAATTGTAATATTATATTCTTCTCCCGCCATCGCAATTCTAACCCTAATAAATGGCTCCCCTCAACTACGAACTGCCACCATCCAAGTTCTTCCACCTTCACACCTCAAATATCCCTTACAACACACCAATTTCTCCAACCATTTTCCTTCACATCACTACT


Gene Sequence:
>Vu_16512(-)
ATGCGTTCGAACAACAGTACCACATGTGTTGCATCAAGCACCAGAGCCTCTAATGGTAATGGAGGGTGCCACCCTGTGTACTACGGAGTGAGGCGTAGGAGTAGTGGAAAATGGGTTTCTGAAATCCGTGAGCCCAGAAAACCTAACAGGATTTGGTTAGGGACATTTGCCACCCCTGAAATGGTTGTTATTGCCTATGACGTGGTAGCGCTTGCTCTTAAGGGGAAGGATGCCGAACTCAACTGCCCTAACTCCGCCTCTTCTTTTCCCGTTCCTACTTCATACGCTGCTTGTGACATTTAG