Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16507 LG4 25149471 25151968 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to bacterium, defense response to fungus, response to organic cyclic compound, defense response to bacterium, defense response to bacterium, defense response to fungus, defense response to fungus, inorganic ion homeostasis
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/C 25149495 missense_variant p.Ala9Pro
A/T 25149503 synonymous_variant p.Pro11Pro
A/G 25149645 intron_variant
G/T 25149659 intron_variant
A/G 25149681 intron_variant
A/T 25149689 intron_variant
T/G 25149740 intron_variant
C/G 25149744 intron_variant
A/G 25149751 intron_variant
T/*,G 25149759 intron_variant
G/A,* 25149764 intron_variant
A/G,* 25149766 intron_variant
G/C 25149779 intron_variant
T/C 25149795 intron_variant
T/C 25149796 intron_variant
C/T 25149804 intron_variant
T/G 25149813 intron_variant
C/A,* 25149823 intron_variant
T/G,* 25149833 intron_variant
T/A 25149871 intron_variant
T/C 25149872 intron_variant
C/T 25149881 intron_variant
C/A 25149901 intron_variant
A/G 25149928 intron_variant
G/T 25149946 intron_variant
T/C 25149963 intron_variant
G/A 25149965 intron_variant
A/T 25149988 intron_variant
T/A 25150260 intron_variant
G/A 25150344 missense_variant p.Val57Met
T/A 25150365 missense_variant p.Trp64Arg
C/A 25150457 intron_variant
A/C 25150507 intron_variant
C/G 25150517 intron_variant
T/A 25150521 intron_variant
T/A 25150672 intron_variant
A/G 25150775 intron_variant
T/C 25150918 intron_variant
T/A 25151018 intron_variant
G/A 25151026 intron_variant
G/T 25151027 intron_variant
T/A 25151092 intron_variant
C/A 25151112 intron_variant
T/C 25151117 intron_variant
A/G 25151129 intron_variant
G/C 25151228 intron_variant
C/A 25151231 intron_variant
A/G 25151232 intron_variant
A/T 25151237 intron_variant
A/C 25151275 intron_variant
A/T 25151280 intron_variant
A/T 25151335 intron_variant
T/G 25151383 missense_variant p.Ile94Ser
G/A 25151389 missense_variant p.Cys96Tyr
T/A 25151542 stop_gained p.Leu147*
G/A 25151745 missense_variant p.Glu215Lys
T/C 25151749 missense_variant p.Met216Thr
T/C 25151821 missense_variant p.Ile240Thr
A/G 25151857 missense_variant p.Tyr252Cys
C/G 25151876 missense_variant p.Ser258Arg
A/G 25151887 missense_variant p.Lys262Arg
C/T 25151889 missense_variant p.Arg263Trp
G/A 25151890 missense_variant p.Arg263Gln
T/C 25151959 missense_variant p.Val286Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16507.1
MEKQPLEKAKPKYRKGLWSPEEDNKLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGVFSKHEEDTIMALHHMLGNKWSQIAHHLPGRTDNEIKNYWHSYLKKKVMKTKEMESDKQIEHASSSSDTVENSLSPQKLATQDPSYALLQNMEKTATHSDNLFSQSCDFSKEGCQSSLPKLLFSEWLSEDQVNGAGSVNSDDSLVLGNVFDQNSSFQEAIMHLLEGNFGEEYHNSLIHSSTTEVYNSQLKPSNQADGSDFIHCIPGNDLCSNFSLINRAM*


CDS Sequence:
>Vu_16507.1
ATGGAAAAACAGCCATTGGAGAAAGCAAAACCAAAATACAGAAAAGGGTTATGGTCACCTGAAGAAGATAATAAGCTCAGAAACCATATCCTTAAGCATGGTCATGGATGCTGGAGCTCTGTCCCCATTAAGGCAGGCTTGCAAAGAAATGGAAAAAGTTGCCGACTAAGGTGGATTAACTACCTGAGACCTGGATTGAAGAGAGGAGTTTTCAGCAAACATGAAGAAGATACAATCATGGCTCTTCACCACATGTTAGGCAACAAGTGGTCTCAAATAGCACATCATTTGCCAGGAAGGACTGATAATGAGATAAAGAATTACTGGCATTCATATCTGAAGAAGAAAGTGATGAAAACTAAGGAAATGGAATCTGATAAACAAATTGAGCATGCTAGTTCAAGTTCAGACACAGTGGAAAATTCACTCTCTCCACAGAAACTTGCAACTCAAGATCCAAGTTATGCATTGCTACAAAACATGGAAAAAACAGCAACACACTCTGATAACTTGTTCTCTCAAAGCTGTGACTTTTCCAAAGAGGGTTGTCAGAGTTCCCTACCAAAACTCTTATTTTCTGAGTGGCTTTCAGAGGATCAAGTAAATGGTGCAGGCTCAGTGAATTCTGATGATTCTTTGGTATTGGGAAATGTATTTGATCAAAATTCATCTTTCCAAGAAGCTATAATGCATTTGTTGGAAGGGAACTTTGGTGAAGAGTATCATAATAGTCTAATTCACAGTTCAACCACTGAGGTATACAATTCACAGCTTAAGCCATCAAATCAAGCGGATGGAAGTGATTTCATTCACTGTATTCCCGGGAATGATTTATGCAGCAATTTCAGCCTAATCAATCGTGCTATGTAA


Promoter Sequence:
>Vu_16507::LG4:25147471-25149471(+)
TGATTTGATGTTTGTATAAATATATAATGAAGGAATTTCTTTATACCAAATACTCTTGTCTCTTTCTTTGTGGCATCATGTTCCATAGCTGCATGTTCATTTCTAGTCCTATAATTAATCATATTCCATCAAGTATATTAACCTAATTTGGTCTCTTTTTTTTTTCATTTGTCATGTCTTCCAAACTAAGAAAGATATATTATCCAATTCTACTATCCGACACTGGTAAAAAATGTAGTTGTTAACATACCTACAAGACAAATGCATAAGAAAAACAAGATCTCTGTCATTCTTTGAATGATTAACATGTTCAAGAATTTCAATGATATTACAATACCACCATACCAAAAATGTGATTAAAATAAAAATCCTATCATCTCAAATTAGTGCAGTTTATTAATGCTGTGCTATTGGATAATTCAAAGAATTGATTTTATTCACAAAATTATATGAAAAAATGTTTAATAAGTTTTTTTATCATAATATTTGAGGAGTTTATTTAATGTGATTTTTTAATTTTATTTTCTTATATCATTTTATTTAAAAGAAATTAATGTTTTTTCGTTAGATTGGTATTGATATAATTGGGAAAATAATCACATCTTAGTGATTCTGAACTTCTTAAATCCTTTATTCTTTTACTGTGGACACGATAAAAATAAATTAGAGAAATTCAGAATAATTAATATACAATCATTCTTTCAAAAGTGTGTTTAGATAAAATAAATATTAAATTAAAATAAAATATTGAAAGATCACATTAAATAAATTCCTCAAATATCAAGAAAATGATTAATTAAGAAAAAAAATATTTGTTTCTTACCTTCGGTGTAAGATGAAACACTTTTTTTTAACATGCCACAACGCAAACATGCTATTACTAAATTGTGAGACATGAATTATAAATGCATTATGCAAGTTCTTTAATCCTTTTTCATAAGACTTTAAGAAAATAAACGAAAAATGAATAAGGGGTATATTTAAACGGCTTTAAAACACTTACGAGAAAAAAAATTGTTTTTCAAAATTAAAAAAACAATTTCTTTAAAACTTTATTTTTTTATTTTATATACAGATTAATTTTAGTTTTATTTTTCTATCATAAGTGTTTGTAGAAAAGTTTATTTAAACAAAATCTATATAACTACTTTCGTAATATTCAATATTATGTTAATCGGTGGTGGAGATCACTGACAATGTACATGAAAATGTTTACTTAATTAAGCCTCGAAATTATTGAGGTTCAGGAAAAAAAGTCTCCTCTCCATGTTTAAAGGAGACAAAATTCGCATTAACTAAATAAATTTAATATGTAGATGAAGTTTGAAGATTCTTCTCTATCTTCAACAAGGGCTTCTGCATAGAATAAGATTTTGATATTAGGTAAGAAAAGAAACTAGACATTAAAGTACCTGGTGAAGGTTTAATTAAATTACCAGGACAATGATTTCTTCGAAAGTACCTGCAAATAAACATGTTTAAAAATGGCCATTTACAAAAAATAATCATGTTGCATTTGGGGGGTTTTGAACTGTGAAGTATACTTATTTTGATGAATGATTGAGGCCGAAAAAATTGACAAAAAACAGTGATACCAATGGTACAAAACTAAGCCAACAATTTCCAACTTGGTACCTTTCTATTGAGGTAGAAATAGAAATGGTTTCATATAACAGAATATATTATTTTAAGTTATCATTCATGGAGGGTTTTCATATACTTTGTTTACATATATTTGTTTATTCTGTGTCCAAGTTTCAACTCTTTATTTTTGCCATAAATTATGAACATGTACTGCACAATCACACATTTCAATTGCATTATATATATCAGTCTGCTTGTGCACTATTTCAATGCCAAATATTCTTTCCCTTCTCTATTCTTCTCTATTCTTCTCTATTCTGTATGCCTGTTTGTTCTCTCTTTAGTTCATATCTTCTCTAAGGAAACCAATCTTACCATTGAACTCAAATTCTGACAAAAGAAAGAAAGAGGAAAAA


Gene Sequence:
>Vu_16507(+)
ATGGAAAAACAGCCATTGGAGAAAGCAAAACCAAAATACAGAAAAGGGTTATGGTCACCTGAAGAAGATAATAAGCTCAGAAACCATATCCTTAAGCATGGTCATGGATGCTGGAGCTCTGTCCCCATTAAGGCAGGTGAGACCTTTTTTATTCCTTCTGATCCTTTATCCCTCATATCAGTAACATAGTCATGATCCTTTCAAATTAAGAAGCATTTATTGGTTTCTTAGTTGAACTTGTTTAAGTGAGGTTTGGGAAATTCAAGTGGTAGACTCTCACATTAATTATATATGAAAAAGTTGAATAAGATATAAGAAAGAAGATTCACATAACTTATTGTTTTAAGGTTTTCGGTTGTAGATAAGGTTAATCTCTTGTATGAATTGGATTCATATATTATTGATGTATGCCATTTTTTATCGAAAGAACCGTTTGTGAGCAAGTTGAAATGTGGACATATGCTTCATTGTCTTTGTGGCAGTAACAAGGTCTAGTGAAGTGAATTAACAGTTTAAGAGTTCAGACATTCTTTAGCAGAAGCAACTTTAAGAACTTTGTCCAATCAAAATTCAAATTACAAGAGTTGAAATGTGGTTATAAAAGTTCAGAATCTTCATTCAGACAACCTATGTCTTTTTCATGCTTCTGAGTAGCAAACTTCTATGTTTCATAACTAATTAGAAAGGCATTTCGAGTCAACATTACACTTTACCAGTAAAAAGGTGTGAAGAAGATATAATATAACTTTTAATATGCTTTATTTTTGCAATATTTATAAAGGGTAAATTTGTATTTATTTTATTTGATGTTTACTTACTAACTTCACTTAAATTTGTAGGCTTGCAAAGAAATGGAAAAAGTTGCCGACTAAGGTGGATTAACTACCTGAGACCTGGATTGAAGAGAGGAGTTTTCAGCAAACATGAAGAAGATACAATCATGGCTCTTCACCACATGTTAGGCAACAAGTAAGCAAAATGTTGAACATTTTAATTATAATGATTTCTAGTTTACTTGCAACGTTCAAGTAAAATAAGTAACTTCTCTAATATTTTTTAGTTAGAATAACGACAATAACTTAGCTACCTAATAATTAGTGTAAATTGACAAGTCAAGGAAAATATTTTCTTTTCTTCTAACTTTTTTCGAGGCATTAAGTTATACAATGTAATTGGATAAGCCAGCTAGCTATTTATATTTTTATTTTTACTTTTATTTTGTAGAAGCAATTGGGTCCTATTTAAATACTATCAAAAGGGGAAAAAAGGATAGGATGGTCAAACCATGAACTGGCATGGTTAGGAAGTTCAATTTTTAAAAGAGGGAGAGAAGAGAATGTGTACATAGAAGGACAGTTTTTGTAGTATTTTATTCCCTTCACTTAATTTAAATTAATTTTTTCCAATATTAATTGTTTTAGTCGTCTCCATCATACATTATTAACAATTTATTAAATATTTTACACGCAAATATGTTTGTGTATTCTTTCCCCATGTTTTGTTTTGATACGGAATTATTCTTTATAATTGTGGAGGGCATTTTAATATAGTTTAAGGGACATTGTGATCTTAAAAATTCAAAGATCGATATTTTATTCTGCATTTATAAATAACCTCAATTTGAAAAAAAAAAAACTGTTTCATTTTTTCCTACTATAAACTTCATTATATTAATTTATGTGTCATAGCTTCATTCCCCAATTTTATAAAACAAAGTCAACATGAACCATGTTTGACATCTTTAATTGCTTTCAACTGTTCAAAACAAAACCTTATAGATTAATCACAAGGAAGGTAAAATTTTATTGCAGTTCTCTTTGCATTTTCCTATTTCTTTCACCAAATTTTATTTTATTAATAGAAAATGCTGAAAACAAGTTGTTATATTGGTCAGGTGGTCTCAAATAGCACATCATTTGCCAGGAAGGACTGATAATGAGATAAAGAATTACTGGCATTCATATCTGAAGAAGAAAGTGATGAAAACTAAGGAAATGGAATCTGATAAACAAATTGAGCATGCTAGTTCAAGTTCAGACACAGTGGAAAATTCACTCTCTCCACAGAAACTTGCAACTCAAGATCCAAGTTATGCATTGCTACAAAACATGGAAAAAACAGCAACACACTCTGATAACTTGTTCTCTCAAAGCTGTGACTTTTCCAAAGAGGGTTGTCAGAGTTCCCTACCAAAACTCTTATTTTCTGAGTGGCTTTCAGAGGATCAAGTAAATGGTGCAGGCTCAGTGAATTCTGATGATTCTTTGGTATTGGGAAATGTATTTGATCAAAATTCATCTTTCCAAGAAGCTATAATGCATTTGTTGGAAGGGAACTTTGGTGAAGAGTATCATAATAGTCTAATTCACAGTTCAACCACTGAGGTATACAATTCACAGCTTAAGCCATCAAATCAAGCGGATGGAAGTGATTTCATTCACTGTATTCCCGGGAATGATTTATGCAGCAATTTCAGCCTAATCAATCGTGCTATGTAA