Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16494 LG4 24988099 24989202 PREDICTED: receptor-like protein kinase
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction
Cellular Component   located in   extracellular region, plastid
Molecular Function   enables   kinase activity
SNP Position Effect Amino acid change
T/A 24988138 3_prime_UTR_variant
A/T 24988230 3_prime_UTR_variant
A/T 24988245 3_prime_UTR_variant
A/G 24988265 3_prime_UTR_variant
G/T 24988348 3_prime_UTR_variant
T/A 24988371 3_prime_UTR_variant
C/T 24988391 3_prime_UTR_variant
T/C 24988398 3_prime_UTR_variant
C/G 24988440 3_prime_UTR_variant
A/C 24988471 missense_variant p.Leu243Arg
C/T 24988720 missense_variant p.Gly160Glu
A/T 24988761 synonymous_variant p.Thr146Thr
A/G 24988773 synonymous_variant p.Ile142Ile
A/T 24988779 synonymous_variant p.Ser140Ser
G/A 24988785 synonymous_variant p.Ile138Ile
T/A 24988796 missense_variant p.Thr135Ser
T/A 24988808 missense_variant p.Asn131Tyr
T/C 24988810 missense_variant p.Asp130Gly
C/A 24988811 missense_variant p.Asp130Tyr
G/C 24988830 missense_variant p.Phe123Leu
A/G 24988831 missense_variant p.Phe123Ser
A/C,* 24988839 missense_variant p.Phe120Leu
A/C 24988847 missense_variant p.Tyr118Asp
A/C 24988854 missense_variant p.Cys115Trp
G/T 24988858 missense_variant p.Pro114His
C/T 24988866 synonymous_variant p.Glu111Glu
C/A 24988873 missense_variant p.Gly109Val
A/G 24988875 synonymous_variant p.Tyr108Tyr
C/G 24988887 missense_variant p.Leu104Phe
A/G 24988901 missense_variant p.Phe100Leu
A/G 24988903 missense_variant p.Val99Ala
G/A 24988911 synonymous_variant p.Asn96Asn
C/T 24988928 missense_variant p.Val91Ile
G/A 24988972 missense_variant p.Ala76Val
A/G 24989003 missense_variant p.Cys66Arg
G/A 24989046 synonymous_variant p.Leu51Leu
A/G 24989138 missense_variant p.Ser21Pro
G/T,* 24989143 missense_variant p.Pro19Gln
C/A 24989146 missense_variant p.Cys18Phe
A/C 24989150 missense_variant p.Phe17Val
C/A 24989159 missense_variant p.Val14Phe
T/A 24989160 synonymous_variant p.Leu13Leu
G/C 24989162 missense_variant p.Leu13Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16494.1
MKMNLSIFICIILVVHFCPFSRIEILCTPYPEIAVYIPEERESFLKLKYHLKHSSNRLSSRNSNRCQWNNITSGEAQLHFSIQFPSSDESVGYPFNEEVFEEALEEGYGGEINPCLVYDFKHFNYLDFRDNLFQTIPIPSFIATITSLTHLNLSNAGIIGTLPSQIGNLSDSLYLDLQSDETWFTDNIDWVSSLSKLRYLALSNIWPVGGGMPIPSFVGTMTTLIHLARKRRYANSLSIGKSLQLHIP*


CDS Sequence:
>Vu_16494.1
ATGAAAATGAATCTCTCCATTTTTATTTGTATTATCCTAGTTGTTCATTTTTGTCCGTTTTCCCGTATTGAAATCTTGTGCACACCATACCCAGAGATAGCAGTGTACATCCCAGAAGAGAGAGAGTCATTTTTGAAGTTAAAGTATCATCTCAAACATTCTTCAAATCGACTTTCTTCTCGGAATTCCAATCGCTGTCAATGGAACAACATTACATCCGGTGAGGCCCAGCTTCACTTTAGCATTCAATTTCCTTCTTCCGATGAGAGTGTAGGTTATCCATTCAACGAAGAAGTTTTCGAAGAAGCATTGGAAGAAGGGTATGGTGGAGAGATAAACCCTTGTTTGGTTTATGATTTTAAGCATTTCAATTACTTAGATTTCAGAGACAATCTTTTTCAAACTATTCCGATCCCTTCTTTCATTGCAACAATCACTTCCTTAACTCACCTCAACCTTTCTAATGCCGGAATCATAGGGACCCTTCCTTCTCAGATCGGAAATCTTTCCGATTCACTCTATCTTGACCTTCAAAGTGACGAAACTTGGTTTACTGACAATATTGATTGGGTGTCAAGTCTTTCAAAGCTTCGCTATCTTGCCCTGAGCAACATTTGGCCAGTTGGAGGAGGTATGCCAATTCCTTCTTTTGTTGGGACAATGACCACATTAATTCATTTGGCCAGAAAAAGGAGGTATGCCAATTCCCTCTCGATTGGAAAATCTCTTCAACTCCATATACCTTGA


Promoter Sequence:
>Vu_16494::LG4:24989202-24991202(-)
AATTTTCTAACCCATGGATTACTATGAAAGACCAACTAGAGATAAATCTTTGTACTAGTTTTTATTTATTTATTTCAATCTGACGTGATTCATCCGTCTCATTTTTTTCTACCTTGCAAAGTAAGTTAGAAAGATGTGAGAAGAAAACAAGCATCTTCGTCAACATCAATTAGTCCTACTATACAATTGTTCAATTCAACACGGTAAGTGTCAATTGATCATTAAAGGAGCACAATAATATTGTTTAATTAAGGAAGGTTTAATTATTTATTTTGTTCTTAGTTTTTTGGAAAAATATTAAGTTGATTGTCTAATTTTTTCATATGGTTCTATTTTTTTTTAAAAGTGATTTAATTTGATATTTTCTATTGGCACTATATAAACTATATTAAAATCAATGTCATGTATTAATTTGTGATTTCTTATAAAATTGTATTAATTATTTTTTAAAATTTTGATTTATTTTTGACATGTTATTTCAAAGTTGTGTCATGATAATATTAGTGTTATCTAGAAAAGTATAATTTGGTTTTTATATTTATTTTTTATACAATTTAGTTTATTTCTTTTTTTAAAATACAATAATATTGTTTCTGTTCAAATTGAGATAGTTTTTTTTTATAAGTCTTATACTGGTATTTTTATTAAATATTTCTTGAAAAAATCATGTTAGTTAGAGTTTGAATATAATTTTATATCTAATATGAAATGAAATATATATTAAATAAAAAAACAGCAAGAAAAAAATAAAATAAATAAGTTGAATAATATAATTTCTTAACATGCAAATATTTGACTTTATACATATATATATATATATATATATATATATATATATATATATAATTTTATTATTTCATAATTATTATCTCTTTTAAAAATTATTTCTTAGTTTCAATTCGGTATATATATTAAAATTATTTTGAAAATATTTAAAAAAATCAGAAAAATCGGCAACGGATCTCCAAAAAATATTTTAGAAGTAATAAGATAAATGTATATAAGTTTGTACAGATGGAAAATATATAAAATATACTAAAATAAAAAAAATTAATTTATATATTAATTACCTGTATAGAAAAAAAATATATTGAGGGTTGAGGACCTCCCTTAAGCCTTCAATGATCCCCTGTGAGTTTCTATTTAAATTCTAACTAAGGATTGGAATTTATCTATTTTATTCAAATCATTCATGGCAACAAGTTATATCTGTTGAGCTTGGTGTAGATTATATAATCGTGAGAGCCAACTTAATTGGATAAAAAATAATTATAATTAAATATAATCTTTGCTAGATACTGATTTTGACACGGCAATTTGATTTTATAAGTTTACTATAGAAAATTAAAATTGTTAGATAGATAGTGGAAATATGAAAAGGCACTCCACCAATATATATATATATATATATATATATATATATATATATATATATATATAGGGTTAAATATGTTTTCGATCCCTTAACTTTTAGTGAAAATTGGAATTAGTCCCTCTTCAAAACTTTGGACTAATTTAGTCCCCAAACTATAGAAATGTGTGAATTTAGTCCTTTTAACCAAATTTTGTTAACTTTATTTGATGTTTCAAATGCATTTCTAAGTTAACATTGAAGCAAAAATGTGTCAAATGGTATAAACAACTCAAATGCTATCATGAAACGCACTTGAAACATCAAATAAACCTAACAAAATTTAGTTAAAAGAACTAAATTCACACATTTCTAAAGTTTGGGGACTAAATTAGACCAAAGTTTTGAAGAGGGACTAATTCCAATTTTCACTACAAGTTAAGGGACCAAAAACATATTTAACCCATATATATATATGAACACGTCATTTGAAAAAAAAACATATGATACAGGTTTTGACACGTCATTGGATTTTAAAAATTTTGCATAGAAAATTAAAATGGAAATATGAAAAGGCGTGCCAATTTAGTATGCACAACCCAGTCACTTATTTCTAATATAAAAATAGATACTTGCTTTGCTTCTATCT


Gene Sequence:
>Vu_16494(-)
ACACATGAAAATGAATCTCTCCATTTTTATTTGTATTATCCTAGTTGTTCATTTTTGTCCGTTTTCCCGTATTGAAATCTTGTGCACACCATACCCAGAGATAGCAGTGTACATCCCAGAAGAGAGAGAGTCATTTTTGAAGTTAAAGTATCATCTCAAACATTCTTCAAATCGACTTTCTTCTCGGAATTCCAATCGCTGTCAATGGAACAACATTACATCCGGTGAGGCCCAGCTTCACTTTAGCATTCAATTTCCTTCTTCCGATGAGAGTGTAGGTTATCCATTCAACGAAGAAGTTTTCGAAGAAGCATTGGAAGAAGGGTATGGTGGAGAGATAAACCCTTGTTTGGTTTATGATTTTAAGCATTTCAATTACTTAGATTTCAGAGACAATCTTTTTCAAACTATTCCGATCCCTTCTTTCATTGCAACAATCACTTCCTTAACTCACCTCAACCTTTCTAATGCCGGAATCATAGGGACCCTTCCTTCTCAGATCGGAAATCTTTCCGATTCACTCTATCTTGACCTTCAAAGTGACGAAACTTGGTTTACTGACAATATTGATTGGGTGTCAAGTCTTTCAAAGCTTCGCTATCTTGCCCTGAGCAACATTTGGCCAGTTGGAGGAGGTATGCCAATTCCTTCTTTTGTTGGGACAATGACCACATTAATTCATTTGGCCAGAAAAAGGAGGTATGCCAATTCCCTCTCGATTGGAAAATCTCTTCAACTCCATATACCTTGATCTTCATAGGGGTTATTCTGTTTATCAAACTTTTTCAACTAGAAATGTTGACTAGTTGTCGAGGCTTCTGAAGCTTGAGTATCTTGATTTGGGAGGTGCAAACCTATCCCAATTGTTTCACTGCCTTCACACTCTCCAAGCTCTCTTTCAACGTTGATGCACCATTTCCAATCTGAGCTTTTTAAGTATGTTAGACTTGTTTTATATTGATTTGAATGAAATATTACAACAAAAACTCAATTGCAAGCCTTTGATGCATAGTTGATTAAATTTTTAGGTCATTTATGTATTGGTTGATTTATTTTCAAATATGAGAACATTATTTAAATTAGAGGTCAGATATATTTTTCTGC