Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16320 LG4 21669708 21670825 "PREDICTED: AAA-ATPase ASD, mitochondrial-like "
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 21669742 missense_variant p.Thr12Met
A/G 21669744 missense_variant p.Thr13Ala
C/T 21669748 missense_variant p.Thr14Met
T/C 21669751 missense_variant p.Val15Ala
G/A 21669753 missense_variant p.Ala16Thr
C/T 21669963 missense_variant p.Thr60Ile
A/C 21670111 synonymous_variant p.Thr109Thr
T/G 21670127 missense_variant p.Phe115Val
T/A 21670158 missense_variant p.Leu125His
G/A 21670208 missense_variant p.Asp142Asn
A/G 21670277 missense_variant&splice_region_variant p.Arg165Gly
T/C 21670280 splice_donor_variant&intron_variant
T/A 21670290 intron_variant
C/A 21670546 intron_variant
A/C 21670603 intron_variant
C/A 21670704 stop_gained p.Ser242*
A/T 21670708 synonymous_variant p.Thr243Thr
C/T 21670709 missense_variant p.Arg244Cys
T/C 21670761 missense_variant p.Val261Ala
G/A 21670771 synonymous_variant p.Arg264Arg
C/T 21670784 stop_gained p.Gln269*
G/A,C 21670808 missense_variant p.Asp277Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16320.1
MTACLLSSPSPTTTVASSSPPSSSLPKDGRSSSRSEFLAVVQRQSFSLANLGDLRWVRRTQMSYDVDVTQTLHMMWSHNGQFVGLYVYDLELTTVKDNTELRKLLIETTSKSIIFIEDIDCSLDLTGQRKKKANKLLDEETDKDVVGRKEAKEEGGSGSKVTLSRGRMDKHIQLSYCPFDGFKVHENNYLKLQTHPLFDSIKRLIEEANITPTDVKLVEWLKMMVGRRRAEEVVGSRLEVKPSTRALKRSLLVALKCVDPEVEKRPKMSQVVRILEADEYPF*


CDS Sequence:
>Vu_16320.1
ATGACGGCCTGTCTACTGTCATCGCCAAGCCCAACGACTACGGTGGCGAGTTCTTCTCCTCCTTCATCGTCACTGCCAAAGGATGGCAGATCTAGTTCGCGTTCTGAATTTCTAGCGGTGGTGCAGCGTCAGAGTTTCTCGTTGGCGAATCTAGGGGATTTGCGCTGGGTTCGAAGGACACAGATGTCGTACGATGTGGACGTGACGCAGACGTTGCACATGATGTGGAGCCATAATGGCCAATTTGTTGGCCTATATGTCTATGACTTGGAGCTCACTACAGTGAAGGACAACACAGAGTTGAGGAAGCTTCTGATTGAGACAACAAGTAAGTCTATAATTTTTATTGAAGACATTGATTGCTCTCTTGATCTTACAGGGCAGAGGAAGAAGAAGGCAAATAAGTTGTTGGACGAGGAGACTGATAAGGATGTTGTTGGAAGGAAAGAGGCCAAGGAAGAAGGAGGGAGTGGCAGCAAAGTCACACTCTCAAGGGGGAGAATGGACAAACACATTCAACTCTCCTATTGCCCTTTTGATGGCTTTAAAGTGCATGAAAATAATTACTTGAAGCTACAAACTCATCCATTGTTTGACTCCATCAAGAGGCTAATAGAGGAGGCCAACATCACCCCAACTGATGTGAAACTTGTTGAATGGCTCAAGATGATGGTGGGGAGGAGAAGGGCCGAGGAAGTTGTGGGTTCAAGGCTTGAAGTGAAACCATCAACACGTGCTTTAAAGCGTTCTCTTCTGGTTGCACTTAAGTGTGTTGATCCTGAAGTAGAAAAGAGGCCTAAAATGAGTCAGGTTGTGAGAATCCTTGAAGCTGATGAATATCCATTCTAA


Promoter Sequence:
>Vu_16320::LG4:21667708-21669708(+)
TTGGTTTTTTCACTTTAGTATCCAATTTTAAAAGTGTATAGATTGTGTTCCAAAGTTATAAAAAATGTATCAATAAAGTTCTATCCGTTTAATTTTGTTGAAGTTGATAACATTGACTTTATTGTGGATTGAGTTGTGCAAGCATTGCTTTCGTGACATTTAGTTAGAATAAATTAAGTTGACGTGTCAGACAGAGAAAAGGTTACATGTAAATTGAATTTTTTAGGGTTTTTAATTGGAAAAAATAATAATTATGAAAATTAGGTCTTATCTAGACAACAAATTGGAGATTTTTGATCGAGGGTTGATTTGGTGTGAGAATTGGTTCTGTAGGTAAAGGTGGATGGTCAACGAAGGAGTTTGGTAATCGAAGGAGGTTCGTGACCGAAAAGGCTTGGTGAACGAATAGGGTTTATCAGCGACTACGGTTCATGACCGAATAGGGTTCGTGAGCGTGGTATTTCGAAGCAAAAAGGTGCAAGGTGCGTTTTTATCAATTATTTTATGTAGTTGGGGTCCCCCAAATAACGTTGCCTTTGTTGTGGTCTCGTTCTTTATTGTGTTTCATTTTGGTGGCGTACTATTGTTTCTTTGTTTTTGGTCCCCCATTTGAAAATTAAATTGTTTATTGTATGGTTGTTGTTGGTACGCTGCATATAGTTGGTCTGTGTTACTCAGTGAGTCATATTGTTAATGCATATTGGTTTAAGGATTAAGACAAAATGAAATGTTGTAGGTGAAACACTCAGTGCGTGTGGTTAAGTTGTTATAACTACACGTGTAATAGTTGTTGGTAATGTGGCATGTTTAGAATGTAGATGCATGTGAAGGTCATTAAATGATAATAGATGCATGTGAAGGTCATTAACCAAGTGCATGTAGTCTGACACTTACTTTTATATAGGATGGTGAAGGGGATGGTCAAGATGATGTTGTTGGTGGTGAAGGGGATGGTGGGGATGATGTTGTTGTTGGTGAAGGGGATGGTCAAGATGAGTTTGATGTTAGTAGTTGGATTGGGTCCGAAGAGGATTTTGTCAGTGAAGATGATGTTGTGGATGTTAGTGTGCATGAAGATGAACAACCCCAAGAACAACAGTGCCAAGGTAATGTGTTTGTTGAAGTAGGTACATCAAGTGGATCTATTACTCCATGGAAGCATGTATAGGCTAGGGGATTATCTGACAGTGAGTGAGAATTTGATACCTGTCACTAGTAAAAAAAGTGGTTTCTAACACGCCATATACGCTTCGGTTACGCAGAACCCGAAACATAAAAAGCTATATACCTCGGTTGCACCTTGACCCGAGGCGGAATGGTGATATTGTCTCGGTTAGTAGAAAATCTGAGACCTATGCCTCTGCACTAAGCATTGCAAATCAAACCTCTTTGTCTGACATCTTTTTAAAAAGACCCTATTGCCTCGGGTTGCCAGGCAACCGATGCTAATACACATGTCCAAGTCAAACTTTTCGCCTGAAAGTCCTCTGCAAGTCATGTTTTTCGCCTGAAGCACTGACAACTGGCTTATTGCCTCAGTTTTCTAGGCAACCGATGCCTATACGCTAGCCTATTGCCTCGTTTTGCTAGGCAACCGATGCCTATACCCTGGCTTATACGTTTCATTTGCACAGCCCAACAGCTTCTTCCTCGTGCTCTCCCATTCTTCCTCTGCGGTTTCGTCCACCACTACCACTCCTTGCCTCGCCGAGTCGCCCCCTGTGCTGCCAGTGGTCTCGCCTGCTTCCTTCTTGCCAGTGCTCGCGCCATTTGTGCCCCACCGTCGTGCCATTCCTCCCACATCTTCATTCAGTCTTTCTCGAGGTTTGTCTTCGTGCAAACCCTATTCTTCACCTCTGTCTCTCATCTAATTTCTTCCCATTTTGGTCGTTTCAACCATTGAATATCTCCATCCCTACTGATTAAATGCCTTCCTCCACCGATTTATTTCCCCTTTTTCATCTTCCATGGCCATCTTCATGAAGCGCCATTGTCACGGA


Gene Sequence:
>Vu_16320(+)
ATGACGGCCTGTCTACTGTCATCGCCAAGCCCAACGACTACGGTGGCGAGTTCTTCTCCTCCTTCATCGTCACTGCCAAAGGATGGCAGATCTAGTTCGCGTTCTGAATTTCTAGCGGTGGTGCAGCGTCAGAGTTTCTCGTTGGCGAATCTAGGGGTTTGTCGTTTTGTAACTTGAGGTCTTGGTGGAAAAGGTTGGAGAGGGTGCTGCGGACGTGGATGCGGATGTCACAGGATTTGCGCTGGGTTCGAAGGACACAGATGTCGTACGATGTGGACGTGACGCAGACGTTGCACATGATGTGGAGCCATAATGGCCAATTTGTTGGCCTATATGTCTATGACTTGGAGCTCACTACAGTGAAGGACAACACAGAGTTGAGGAAGCTTCTGATTGAGACAACAAGTAAGTCTATAATTTTTATTGAAGACATTGATTGCTCTCTTGATCTTACAGGGCAGAGGAAGAAGAAGGCAAATAAGTTGTTGGACGAGGAGACTGATAAGGATGTTGTTGGAAGGAAAGAGGCCAAGGAAGAAGGAGGGAGTGGCAGCAAAGTCACACTCTCAAGGTTGTTGAATTTCAATGATGGGATTTGGTCTGCTTGTGGATGGGTTGATTGTGTTCACAACCAATTATGTGGAGAAACTTGATCCTACACTCATTAGAAGGGGGAGAATGGACAAACACATTCAACTCTCCTATTGCCCTTTTGATGGCTTTAAAGTGCATGAAAATAATTACTTGAAGCTACAAACTCATCCATTGTTTGACTCCATCAAGAGGCTAATAGAGGAGGCCAACATCACCCCAACTGATGTTGCTGAAAACCTCATGCCCAAGTCCTCACTGGATGATCCTCATGAGTGCCTCTCCGAGAGTTGATAATATTTTGATTATCCTCATTACAGGTGAAACTTGTTGAATGGCTCAAGATGATGGTGGGGAGGAGAAGGGCCGAGGAAGTTGTGGGTTCAAGGCTTGAAGTGAAACCATCAACACGTGCTTTAAAGCGTTCTCTTCTGGTTGCACTTAAGTGTGTTGATCCTGAAGTAGAAAAGAGGCCTAAAATGAGTCAGGTTGTGAGAATCCTTGAAGCTGATGAATATCCATTCTAA