Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16161 LG4 17584666 17587120 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T,* 17584695 5_prime_UTR_variant
A/C 17584729 5_prime_UTR_variant
C/A 17585207 5_prime_UTR_premature_start_codon_gain_variant
A/C 17585239 5_prime_UTR_variant
G/A 17585244 5_prime_UTR_variant
T/A 17585311 5_prime_UTR_variant
A/C 17585348 5_prime_UTR_variant
G/A 17585864 synonymous_variant p.Thr151Thr
C/T 17585909 synonymous_variant p.Thr166Thr
G/T 17586068 missense_variant p.Glu219Asp
A/T 17586133 missense_variant p.His241Leu
C/T 17586134 synonymous_variant p.His241His
A/T 17586321 stop_gained p.Lys304*
T/C 17586335 synonymous_variant p.Asn308Asn
C/T 17586350 synonymous_variant p.Ala313Ala
G/A 17586593 synonymous_variant p.Arg394Arg
C/T 17586602 synonymous_variant p.Asn397Asn
T/C 17586848 synonymous_variant p.Asp479Asp
G/A 17586936 3_prime_UTR_variant
C/G 17587027 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16161.1
MNARRKLAGLGYHRNAKKCKEKFENVYKYNKRTKENKSGKSHGKTYKFFDQLQALENHQFTISYPTKPQPTLATTNTLTLPARQSDHGNNNVISYVTPFPSTNPTHISPSPQTNTDTNTNTTTVSTTNPRDTSPPQTTTTTANNTNNDNVTYSLPNMNTPFSTTTTTSTSSSTASDEDLEERYRRKRKWKDYFRRLTRKVLLKQEEMQKKFLEAMDKRERERVAQQDNWRIQEMARINREHEILVQERSTAAAKDAAVIALLQKMYGQQNTTQHVQVQPPEQQNQTTLQSQLPTPMPNNNFEIKKLNNGHHSATSTSTVTTSPATSSSSRWPKAEVHALIRLRTSLDTKYQENGPKAPLWEDISIAMQRLGYNRSAKRCKEKWENINKYFKKMRDNNKERRENSKTCPYFHELDAIYKERSLSQNPFGVFQNMKPNEMMMMEPLMVQPEQQWRPPPQSLEEGIEKNSSDEYQEKEEENDGDDDDHVGVEEDEDGVEDEACETGTND*


CDS Sequence:
>Vu_16161.1
ATGAATGCACGCAGGAAACTGGCGGGGCTTGGATATCATCGAAATGCAAAGAAATGCAAGGAAAAGTTTGAGAACGTGTACAAGTACAACAAGAGAACCAAAGAAAACAAAAGTGGGAAATCACATGGAAAAACCTATAAATTCTTTGATCAATTACAAGCCCTTGAGAATCATCAGTTCACGATCTCTTACCCAACAAAGCCACAACCTACTTTGGCAACAACAAACACATTGACGTTGCCAGCTAGACAAAGTGATCATGGTAACAACAACGTTATCTCTTATGTCACACCTTTTCCTTCCACAAACCCTACACACATTTCTCCTTCACCACAAACCAATACCGACACCAACACAAACACCACCACAGTATCCACAACCAACCCTAGAGACACATCACCACCACAAACCACCACCACCACCGCCAACAACACCAACAACGACAATGTCACGTATTCTTTGCCAAACATGAACACCCCTTTCTCAACCACCACCACCACCTCCACCTCTTCTTCCACAGCATCTGATGAAGACTTGGAAGAGAGGTACCGGAGGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTCACTAGGAAGGTCCTCTTGAAGCAAGAGGAAATGCAGAAGAAGTTCTTGGAAGCCATGGACAAAAGGGAGAGGGAAAGAGTGGCACAACAAGACAATTGGAGGATCCAAGAAATGGCAAGGATTAACAGGGAACACGAGATTCTTGTTCAGGAGAGATCAACAGCAGCAGCCAAAGATGCTGCAGTCATTGCATTATTGCAGAAGATGTACGGCCAGCAAAACACCACACAACATGTTCAAGTACAGCCACCAGAACAACAGAATCAAACAACGCTACAATCACAGCTTCCAACACCAATGCCAAACAATAACTTTGAGATCAAGAAATTGAATAATGGTCATCACAGTGCCACCAGTACTAGCACTGTCACTACTTCTCCCGCGACTTCTTCTTCTTCTAGATGGCCAAAGGCTGAAGTTCATGCTTTGATAAGGTTGAGGACAAGTCTGGACACCAAGTATCAAGAAAATGGACCAAAAGCTCCATTGTGGGAAGATATATCGATCGCAATGCAGAGGCTTGGTTACAACCGGAGTGCAAAGAGATGCAAGGAAAAGTGGGAGAACATCAACAAGTACTTCAAAAAAATGAGGGACAATAACAAAGAAAGGCGTGAAAATAGCAAAACATGTCCTTATTTTCACGAGCTTGATGCTATATACAAGGAAAGGAGCTTATCCCAGAACCCCTTTGGCGTGTTCCAGAACATGAAGCCGAACGAGATGATGATGATGGAGCCATTGATGGTGCAACCGGAGCAGCAATGGAGGCCTCCACCTCAATCGTTGGAAGAGGGTATAGAGAAGAACTCTAGCGATGAATATCAAGAAAAAGAAGAAGAAAACGATGGTGATGATGATGATCACGTTGGTGTTGAAGAAGATGAAGATGGTGTGGAAGATGAAGCGTGTGAGACTGGGACAAATGATTAA


Promoter Sequence:
>Vu_16161::LG4:17582666-17584666(+)
TCTCTGGTAAAGGGCATATATACAATAATAATATTATTGGTTGATAAAGTCCATCACGTTGAAGCACGTTGTGGGGTCACTAAAAATTAATGGAATTCTTGAATTCAGAGTACAAAATAAGAAAAACGAAAGGCAACTTTATCAGTTTCTCCTCTTCCACATGTAATTGGAAAATTATTTGATATTTACACTGAGAAAATAAAACAGAAAAACCGACTCAATAACTCTTTGTAAATTGTACTAGCATGTTATTCATCGGCAAGTCACTTCATTACCCACACTATTGCAAAATGGTCCCTAATAAAAATTCAAATAATTGGTCATCATAAAGCCTTAGAAGGTTGTTAGCCATCAAAATATTCATTCTATTTATTATGTTAGGTCGAATATAACTGAATTTGTCACCGGTTACTTCCATTTCATAAATAGACTTTGCCTATGCATAGTGACCTATATCTAACAAAAAAACCATTAATTCATCATTATCAACAAATTAGGTTCAAATTATTATTTTCATAACCAAGCTTCAAACTCTACTTTCTCACACCACGTGCTCTCATCATCACCCAAATTTCCTCCAATTTATTATCCAAACTATATATATATATATATGTGCTTCATTACACCATTTCATTTTTATAACATCGTGTAATCTTTAAACTAATTAAATTATGAATCCATATAGTTTTTTTAACTACTATATTTTAATTAATTTATGAAGAATTGGTTGAGAATATGTAAAAATGTGAAACTAATGTTAAATAAAATTTTCAAGGATTAAAAAAAAATGTTTTCCACGGTCACATATATTGGAAAAGTCTTTAAAATCGGAATCCCCTTGATAGAATGAGTTCCACGAATTTATTAGAAGGCAATGATAATTGATATCAACCCTAGGGGCAAATTAGTAATTCCACAACGGCATTTGTGAAAACGGCCACTGAAATCCAAAATCCGCAAACGCAAAAGCTGACCTACAACAATGGCCACAACTTATTATCTCCATCGTCGCTTCTGCGGTCTATTTCCCACTACAACTGTTAATTTCCTTTTTCTAAAATATTTATCGCAAAAAACAAAAATAAAAAAATAAAAATCTTTACGTTTTTGATATATATTTTTTTTTCTATAATCATATATATAATATCTCATACTTTATTACTTTCATTTTTCTTTTCCTGGCACTTACGTGTGACGTACAGATACGAGAACCAAAGCGACTTTTCTGTCGTTTTTATTTTCAACCCAATAAAAAAAAAGTGAAGATTCCATGCCCTAATAATGAACGAGTTTAATTTATTTATTATATTATATATATTGTCCGAAAATGTAATTTTATTAAACAGATAATAAAAAATTACTTTTTTTTATCATATTAACAAAGTGGCACTATTCATCAAATATCTGTTTTAAAAGATTTCATAGGTGTGTATTAATTAAACTCATAATAAAATTAAAAAGATAAACAACACCCATGTACATCACATGGAATGAAAGTTGCTTCACCTCAATTAAAGTCTATTTTTTTTTCTCTGCTACGAAATAGAAATAAATTAAACTCCACAAAATAAATAAACATATAATAACCTCAAGCATCCCATACTCATAAAAACCCTTATATAGTATTCACCTTGTCTTCTATAATTCATTTTTTTGCTCTAGCTGTAATTGCATAGGGACACAATATCTCTGTAGCTATATGCAGCTAGGAGACTCAAGTGTGTTGGAGATCTCCTCCCATAGCGAGCCCGAGATGGCGGTGGCGGCGGCGGCGGAAGGAGCGGCTCACGGCGGCGAGGATGACGGTGGTGATGATGAGATGATTGGAGTGGATGTGGATGGAAATTCAGGTGAAGGAAATGAAGGTAATAAGATGAGCTTTGGAGGGAACCGGTGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCGGATATGGATGCAGTGTTTCGTGATTCAAGTCTTAAAGGTCCACTATGGGAAGAAGTTTCAAGGT


Gene Sequence:
>Vu_16161(+)
TAGATAAAACTATATATAATAAATATACTATATATATATATATATATATATATAACTCAATTTAAATACATCTTTTCTCTCTATTCATCTCTTTCATTTTTTTCTTTTTCAAGTCACTTCATTCTTTCTTTCATTGCTTCTGAAGAGACTACAAAGTTCAATATTTCCCTACAGATCATGCATGCAGATCTGTGAATTGGTTTTCAATTGGCAGTTCAATCAATTAAATATCACTTCCCTTTATTCCAAAACTTTTGTATATTCGAACTGTCGAGATTTTTTATTTTATTTCATGCACCAAATCGTATCCCAGTATCAGTGAGATAGTAAATACTCTATATGAACTTGGTCTGCATAATTGACCTCAGTTTTTCATATCTAAGTTTCAGGTTTTGTTTAAAGGTAAAGGCATCTGTAAAATGGATCCGTGTTTGAAATGAATCATTCTGTGATTTGCTCTAGCTTTTAGGTCACTCTTCAATCAATCTAGTTTTTTTGTCTTATTTGTTAGATTCATTTAGGTAATATTGAACCATCTCTTCTGTTGTTAATTTAGTACATCGAGGCAAGTACATTTCGTTGTCTGAGATTCTACCTTGTTTATTTGAAATCATTTGTTCATTATTTTATTATTTATATATGATTTTATATATTTATCCGAAGCATTTTTTTTTTGTATTGGATAATGTTGAATTTTGGTTTTTCTTTCTCTTTCTACATATATCTGTGTCTAATTTTATGCATAAATGAATGCACGCAGGAAACTGGCGGGGCTTGGATATCATCGAAATGCAAAGAAATGCAAGGAAAAGTTTGAGAACGTGTACAAGTACAACAAGAGAACCAAAGAAAACAAAAGTGGGAAATCACATGGAAAAACCTATAAATTCTTTGATCAATTACAAGCCCTTGAGAATCATCAGTTCACGATCTCTTACCCAACAAAGCCACAACCTACTTTGGCAACAACAAACACATTGACGTTGCCAGCTAGACAAAGTGATCATGGTAACAACAACGTTATCTCTTATGTCACACCTTTTCCTTCCACAAACCCTACACACATTTCTCCTTCACCACAAACCAATACCGACACCAACACAAACACCACCACAGTATCCACAACCAACCCTAGAGACACATCACCACCACAAACCACCACCACCACCGCCAACAACACCAACAACGACAATGTCACGTATTCTTTGCCAAACATGAACACCCCTTTCTCAACCACCACCACCACCTCCACCTCTTCTTCCACAGCATCTGATGAAGACTTGGAAGAGAGGTACCGGAGGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTCACTAGGAAGGTCCTCTTGAAGCAAGAGGAAATGCAGAAGAAGTTCTTGGAAGCCATGGACAAAAGGGAGAGGGAAAGAGTGGCACAACAAGACAATTGGAGGATCCAAGAAATGGCAAGGATTAACAGGGAACACGAGATTCTTGTTCAGGAGAGATCAACAGCAGCAGCCAAAGATGCTGCAGTCATTGCATTATTGCAGAAGATGTACGGCCAGCAAAACACCACACAACATGTTCAAGTACAGCCACCAGAACAACAGAATCAAACAACGCTACAATCACAGCTTCCAACACCAATGCCAAACAATAACTTTGAGATCAAGAAATTGAATAATGGTCATCACAGTGCCACCAGTACTAGCACTGTCACTACTTCTCCCGCGACTTCTTCTTCTTCTAGATGGCCAAAGGCTGAAGTTCATGCTTTGATAAGGTTGAGGACAAGTCTGGACACCAAGTATCAAGAAAATGGACCAAAAGCTCCATTGTGGGAAGATATATCGATCGCAATGCAGAGGCTTGGTTACAACCGGAGTGCAAAGAGATGCAAGGAAAAGTGGGAGAACATCAACAAGTACTTCAAAAAAATGAGGGACAATAACAAAGAAAGGCGTGAAAATAGCAAAACATGTCCTTATTTTCACGAGCTTGATGCTATATACAAGGAAAGGAGCTTATCCCAGAACCCCTTTGGCGTGTTCCAGAACATGAAGCCGAACGAGATGATGATGATGGAGCCATTGATGGTGCAACCGGAGCAGCAATGGAGGCCTCCACCTCAATCGTTGGAAGAGGGTATAGAGAAGAACTCTAGCGATGAATATCAAGAAAAAGAAGAAGAAAACGATGGTGATGATGATGATCACGTTGGTGTTGAAGAAGATGAAGATGGTGTGGAAGATGAAGCGTGTGAGACTGGGACAAATGATTAAACTGCTTCAGTGGACACAGTTGAAGGAGACAAGATAAGGAATTTTCTGAATGGAGAAATATTACGTGTTTGTTCAATGTACTTTTACTTATAGCCTTTATTTTTTATCATTTTTTTTTTCAAACTTGAAAATGTGATTACTTATTGAGGAAACAATTCTTGGGTATAGTGATTCAATTTATATTTTTC