Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16111 LG4 16229620 16234088 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Pathway   B 09121 Transcription   C 03040 Spliceosome [PATH:ko03040]
SNP Position Effect Amino acid change
A/G 16229947 downstream_gene_variant
A/T 16230049 downstream_gene_variant
C/T 16230050 downstream_gene_variant
C/T 16230249 synonymous_variant p.Leu102Leu
T/C 16230656 missense_variant p.Phe238Ser
G/T 16230705 missense_variant p.Glu254Asp
A/G 16230727 missense_variant p.Ile262Val
T/A 16230820 missense_variant p.Leu293Ile
G/A 16230922 missense_variant p.Glu327Lys
G/C 16231498 missense_variant p.Glu519Gln
C/A 16231522 missense_variant p.Gln527Lys
C/T 16231529 missense_variant p.Ala529Val
G/A 16231837 splice_donor_variant&intron_variant
G/T 16232000 upstream_gene_variant
A/G 16232071 upstream_gene_variant
T/C 16232179 upstream_gene_variant
A/G 16232421 upstream_gene_variant
A/T 16232513 upstream_gene_variant
G/T 16232863 synonymous_variant p.Val699Val
T/C 16232971 upstream_gene_variant
G/A 16233224 upstream_gene_variant
C/G 16233291 upstream_gene_variant
T/C 16233355 missense_variant&splice_region_variant p.Met726Thr
G/A 16233423 missense_variant p.Glu749Lys
T/C 16233437 synonymous_variant p.Phe753Phe
A/T 16233505 missense_variant p.Gln776Leu
G/A 16233509 synonymous_variant p.Lys777Lys
T/C 16233653 synonymous_variant p.Thr825Thr
G/A 16233669 missense_variant p.Asp831Asn
A/T 16233739 missense_variant p.Lys854Ile
T/C 16233969 missense_variant p.Ser931Pro
T/G 16234051 missense_variant p.Met958Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16111.1
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRKRKRKGIDYNAEIPFEKRPPPGFFDVADEDRPVEQPKFPTTIEELEGKRRVDIEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRLKLMLPPPQISDQELDEIAKLGYASDLAGSQELTEGSGATRALLANYAQTPGQGVTPLRTPQRTPSGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKDIQTPNPMLTPSATPGGAGLTPRIGMTPTRDGFSFSMTPKGTPLRDELRINEDMNMHESTKRELQRQADMRRSLRSGLGSLPQPKNEYQIVMEPVTEDAEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLIRSDGDKSSFVPPTSIEQADEMIRKELLTLLEHDNAKYPLDDKVNKEKKKGVKRSADLSAVPVIEDFEEDEMKDADKLIKEEVQYLCAAMGHENEPLEEFIEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVRKKLDDDKEKMVRLEKKVTVITQGYEMRAKKSIWPQIEATFKHMDIAATELECFKALQNQEQLAASHRINNLWSEVQKQKELEKTLQNRYGSLIEELEKMQNIINQCRLKAEQQKEIEANNAHAETNETKVDETDVQDTGSIVPHSAEDGNAQAKTVESSHDGTSDQQVGIMQDQSTSSPSHDMNVDSDNMHTIHDSDAKLANASPAAENVVEKVEGSSPTDGYTENGENVSEMGASMEINSPNQDVVANAVTTGESSMEETNAVTEEAN*


CDS Sequence:
>Vu_16111.1
ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTGAAAGCGGCTGTTATGAAATATGGTAAGAATCAGTGGGCTCGAATCTCTTCGCTCCTTGTTCGCAAATCTGCCAAGCAATGCAAAGCTCGCTGGTACGAGTGGCTTGATCCCTCCATAAAGAAGACTGAGTGGACTAGAGAAGAGGATGAGAAGTTACTTCATCTTGCTAAGCTCATGCCCACTCAGTGGAGAACAATTGCTCCAATTGTAGGTCGTACACCTTCTCAGTGTCTTGAGCGGTATGAGAAGCTCCTTGATGCAGCCTGTGTAAAAGATGAGAACTATGAGCCTGGTGATGATCCTCGAAAATTGCGTCCTGGGGAGATTGATCCAAACCCTGAGTCAAAACCTGCACGGCCTGATCCTGTTGATATGGATGAGGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGATTAGCCAACACAAAGGGAAAGAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCAAGGAGGCTTGCTTCCCTACAAAAGAAGAGGGAATTGAAGGCGGCTGGAATTGATATCAGGCAGCGAAAGAGAAAAAGGAAAGGAATAGACTACAATGCAGAAATTCCATTTGAGAAAAGGCCTCCTCCAGGATTTTTCGATGTTGCAGATGAAGATAGACCAGTGGAACAGCCCAAGTTCCCTACTACGATTGAAGAACTTGAGGGGAAAAGGAGGGTTGATATTGAGGCACAATTAAGAAAGCAGGACATTGCAAAAAATAAAATTGCACAAAGGCAAGATGCCCCATCTGCCATATTGCATGCCAACAAATTGAATGATCCAGAGACAGTAAGAAAGAGGTTAAAATTGATGCTTCCACCACCCCAGATATCTGATCAAGAATTGGATGAAATTGCTAAGTTGGGTTATGCTAGTGACCTTGCAGGGAGTCAGGAACTTACTGAAGGTAGTGGTGCTACACGTGCTCTTCTGGCTAATTATGCACAGACACCCGGTCAAGGAGTGACTCCTTTGCGAACCCCTCAGAGAACACCATCTGGTAAAGGAGATGCTATTATGATGGAAGCTGAAAATCTTGCCAGGTTGAGGGAGTCTCAAACACCATTGTTGGGAGGAGAGAATCCGGAGTTGCATCCTTCAGATTTTTCTGGTGTCACTCCTAAGAAAAAAGACATTCAGACTCCAAATCCAATGCTGACCCCATCTGCAACTCCTGGAGGTGCAGGTCTCACTCCAAGAATTGGTATGACACCAACAAGAGATGGCTTTTCTTTTAGCATGACACCAAAGGGGACTCCTTTGAGGGATGAACTACGTATTAATGAGGACATGAATATGCATGAAAGCACTAAACGTGAGCTGCAGAGACAGGCTGATATGAGAAGAAGTCTGCGTTCTGGTTTAGGAAGCCTTCCTCAGCCCAAGAATGAGTACCAAATAGTGATGGAACCAGTCACAGAAGATGCCGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGACAGGATAGCTAGAGAAAAAGCAGAAGAAGAGGCAAGACAGCAGGCATTACTTAGAAAACGATCAAAGGTCCTTCAACGGGAACTTCCTAGGCCCCCTGCTGCTTCATTGGAGCTTATAAGAAATTCCTTAATTAGATCTGATGGGGACAAGAGTTCCTTTGTTCCACCAACCTCTATTGAGCAGGCTGATGAGATGATTAGAAAGGAGCTTCTAACTTTACTGGAGCATGACAATGCTAAGTATCCGCTTGATGATAAAGTGAATAAGGAGAAAAAGAAAGGAGTCAAGCGATCTGCAGATTTGTCTGCGGTCCCTGTGATAGAAGATTTTGAGGAAGATGAAATGAAAGATGCTGATAAGTTGATAAAGGAAGAAGTCCAATATCTTTGTGCCGCAATGGGACATGAAAATGAGCCCCTTGAAGAATTTATTGAAGCACATCGAACCTGCCTCAATGATCTTATGTACTTTCCTACCCGTAATGCATATGGTCTCTCCAGTGTTGCTGGGAACATGGAAAAACTAGCTGCTTTGCAAAATGAATTTGAGAATGTGAGAAAGAAATTGGATGATGATAAGGAGAAGATGGTACGGCTTGAGAAGAAGGTGACTGTTATCACACAAGGCTACGAGATGAGAGCAAAGAAAAGTATCTGGCCGCAAATTGAGGCCACTTTCAAGCATATGGATATAGCTGCAACCGAGTTAGAATGCTTTAAAGCTTTGCAAAATCAGGAGCAGTTAGCAGCATCCCACAGGATAAACAATTTGTGGAGTGAAGTACAGAAGCAAAAGGAACTTGAAAAAACTTTGCAAAACAGGTACGGGAGTCTAATTGAAGAGCTGGAGAAGATGCAAAATATCATAAACCAATGCAGATTAAAGGCAGAGCAGCAAAAAGAAATTGAAGCAAACAATGCTCATGCTGAGACTAATGAGACCAAAGTCGATGAAACTGATGTGCAGGATACAGGGAGTATTGTACCTCACTCAGCAGAGGATGGAAATGCTCAAGCAAAAACAGTCGAGTCATCACATGATGGAACTTCTGACCAGCAAGTTGGGATTATGCAAGACCAGTCGACTTCTAGCCCCAGCCATGACATGAATGTGGATTCTGATAACATGCATACAATACATGACAGTGATGCTAAATTAGCAAATGCTTCACCAGCTGCTGAGAATGTTGTTGAAAAAGTGGAAGGTAGTAGCCCTACTGATGGTTATACTGAGAATGGGGAGAACGTGTCAGAAATGGGTGCTTCAATGGAAATAAATAGCCCCAATCAAGATGTAGTTGCGAATGCTGTAACCACAGGTGAGAGCAGCATGGAAGAAACCAATGCTGTCACGGAGGAGGCAAATTAG


Promoter Sequence:
>Vu_16111::LG4:16227620-16229620(+)
TACTCCTTTTTCATTTTCTTCTTTTTTCAGTAATGTTCTTGGTCAAAGGAGTAGCTGGTCAACCATTGAGAAGCAGCATGAAACACTGTCGCTTGGGCTTTGAGATTTATTGGGACACTGTCGTTTTGGCTAGTCTGATTCCTTTGGGGGTCATGCTCAAGTGTTCATTTGCAAATTCGAAAACCCATGTGCTAGGGTTTCACGAGAACGAAAGAGGTAGAGAAAGTTCCATGGCTCGTGCGATTCTGGACCCAGAAGCTTAAAGACGAACAAGAGGCACGTGTAGGGTGATGAATCGGCAAAAAGAAAGAAGATGATTGGAGGGCTAATAGGCGTGGTTCGCAAACGGGAGAGAAAAAGCGTTGAATCGTGAAGAGCAAAAGCGTCGAAGGTTTTCCATTCCTTTTACCCCTTTCCGTTTTTCTTTGGTTCTGACCCTATAAAAGGGCTTGTAATAATTTTCTGAACGGTGGAATGGAATGTAGAGAGAGATGTACAGAGTTCGGTATTGTTGGGAGTAGAGTTAGTTTCAGTTTCTGACTTTTGGAGTTAGCATAGCTAGGGTTCGTCCGATTCAATTTCCTTTCGATTCGTCTTTCTCAGTTCCTAGTAGTTGTTTTAGCTTTTGGTAGTGTAGAAACATTATTCTTGGTTGTTGGATTTCGCTGAGGTGCTCGCAGGGTGACAGATCGTGAGATTTCTTTGCTATCACATTTTAATGAATTCTGAGTTTCCTTTTAGTGTTATTGTCCAATTTTACAATTCTGTTATTCGAATTCTTGCATGAGTTTATTTTTCTAGCACTTATATTCTTTGATTCTGGAATTTATTGTTAAAATTTGATGATTACTTTTGTTTCTTGTATCTTTAGTTTGGGTTTCTTACGTTGATTTTGTCCATTTCAGTTTCTTTTATGATTTTTGTCTGTGATGAATTAGGTTTTAGGATTGATTCATGGTTTCTGTCTTGTTGGTTTGAATTATACAGGATAATAATGGTGTTTGTAGAATAGGAAATTACTTTTACTTGTACTCATAATAGATATTAGTATTTGATGCTGGTTAAAAGCATTTGATGCTGGTTAAAAGCATAAATTTGAGTTGGATTTGCCTTGGTTTGTTGAATTAAGTGAGGATTACTAACTTTAAGTTCTGAAAATGAACTAAAAGACCCCAAAGTGGGCTTAATTCCACATAATGTCCTTCTGAATAGTAATCAAGACTCTTTGCACCAATCCTTTGTGAATCTGATTCAGATTTTTGTTTTTATCCTATAATTCTTTGTTTGTTCATTCATTTTAGGTGTTTTTGCTGAATTGATCTTAATTTTAGATTGTGATTCTTATATTTTCAACTTTTAGGTCCTGTTACTAGCTTATGCCCTAGTTGATGGTTACTAAGGTTCTTCCCACTGCAACAGTCCACAACAAAAGGGAGTATATGGGTCCAGCTATGTATATGGGTTTAGAAATATCAGTTCTTTCGCCTCTAACTTACCAATTTATATTGTGACTTAATTTTTACATTTTTTATATTTGAAGTTATGCAGCGGGGTATATAATAAAGGGAAGCTTCAAGACATAGTCAAACATAGATTAGGATAAAAGCAAAGCACCAATAATTGAACGAAATTTTTTCCTTTTGTCCGTTGGAAGAATTTGATCCGTGTATGAGCTATAATATATGCTTTTAATAAGTTCTGCTACTAGCTACCATTAATGTCTCTAAGTGTTTTTGTTCTCCGACACATGATGAATAAAAACTTTGTTCGGTGTGCATGGCTATCATCCATCATGATAGCATATATTGGAAGAGAGAGAGGGCTGAATAGAAAATGGAAAAGTAATGAAAAAAATTGTAGTGTGTGATTGTAAATAGAAAATACAGTTTGTACACTAAAAGGATTATGTGTTGCCTTTATGAATGTTACAGATTCTAGATTGCATAACCTGTCGAGGACATATTATACTCAGATTATATTGTCTGTAGTTGAAGCAAAGA


Gene Sequence:
>Vu_16111(+)
ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTGAAAGCGGCTGTTATGAAATATGGTAAGAATCAGTGGGCTCGAATCTCTTCGCTCCTTGTTCGCAAATCTGCCAAGCAATGCAAAGCTCGCTGGTACGAGTGGCTTGATCCCTCCATAAAGAAGGTACCTCTCATCTCAATTTCCTACTTCTTTTTGTATATTATATCCAAAGTTTAGGAGAAGTTTAATTCAAGTTTATCCTTTTTTGTTACTCTGTAAAAAATGGGTAGTGGTTGTAATATTTTGCTCAGTGGTATTACTCTTACACTTTTAAGCTTTCTTATATGATGTGAAACCTACATCCTACTAATTTTCCATTATGTTAGTTACAAGCTATTTTTAATTGATTTTTTCCATCTACAGCTTTTGTCTTCCACATTTTAGATTTTACTATCTGGCTTTTCGCTAATAAGGAGTGATTTTTTCAATTTGATGCTTTGTGTGTAGACTGAGTGGACTAGAGAAGAGGATGAGAAGTTACTTCATCTTGCTAAGCTCATGCCCACTCAGTGGAGAACAATTGCTCCAATTGTAGGTCGTACACCTTCTCAGTGTCTTGAGCGGTATGAGAAGCTCCTTGATGCAGCCTGTGTAAAAGATGAGAACTATGAGCCTGGTGATGATCCTCGAAAATTGCGTCCTGGGGAGATTGATCCAAACCCTGAGTCAAAACCTGCACGGCCTGATCCTGTTGATATGGATGAGGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGATTAGCCAACACAAAGGGAAAGAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCAAGGAGGCTTGCTTCCCTACAAAAGAAGAGGGAATTGAAGGCGGCTGGAATTGATATCAGGCAGCGAAAGAGAAAAAGGAAAGGAATAGACTACAATGCAGAAATTCCATTTGAGAAAAGGCCTCCTCCAGGATTTTTCGATGTTGCAGATGAAGATAGACCAGTGGAACAGCCCAAGTTCCCTACTACGATTGAAGAACTTGAGGGGAAAAGGAGGGTTGATATTGAGGCACAATTAAGAAAGCAGGACATTGCAAAAAATAAAATTGCACAAAGGCAAGATGCCCCATCTGCCATATTGCATGCCAACAAATTGAATGATCCAGAGACAGTAAGAAAGAGGTTAAAATTGATGCTTCCACCACCCCAGATATCTGATCAAGAATTGGATGAAATTGCTAAGTTGGGTTATGCTAGTGACCTTGCAGGGAGTCAGGAACTTACTGAAGGTAGTGGTGCTACACGTGCTCTTCTGGCTAATTATGCACAGACACCCGGTCAAGGAGTGACTCCTTTGCGAACCCCTCAGAGAACACCATCTGGTAAAGGAGATGCTATTATGATGGAAGCTGAAAATCTTGCCAGGTTGAGGGAGTCTCAAACACCATTGTTGGGAGGAGAGAATCCGGAGTTGCATCCTTCAGATTTTTCTGGTGTCACTCCTAAGAAAAAAGACATTCAGACTCCAAATCCAATGCTGACCCCATCTGCAACTCCTGGAGGTGCAGGTCTCACTCCAAGAATTGGTATGACACCAACAAGAGATGGCTTTTCTTTTAGCATGACACCAAAGGGGACTCCTTTGAGGGATGAACTACGTATTAATGAGGACATGAATATGCATGAAAGCACTAAACGTGAGCTGCAGAGACAGGCTGATATGAGAAGAAGTCTGCGTTCTGGTTTAGGAAGCCTTCCTCAGCCCAAGAATGAGTACCAAATAGTGATGGAACCAGTCACAGAAGATGCCGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGACAGGATAGCTAGAGAAAAAGCAGAAGAAGAGGCAAGACAGCAGGCATTACTTAGAAAACGATCAAAGGTCCTTCAACGGGAACTTCCTAGGCCCCCTGCTGCTTCATTGGAGCTTATAAGAAATTCCTTAATTAGATCTGATGGGGACAAGAGTTCCTTTGTTCCACCAACCTCTATTGAGCAGGCTGATGAGATGATTAGAAAGGAGCTTCTAACTTTACTGGAGCATGACAATGCTAAGTATCCGCTTGATGATAAAGTGAATAAGGAGAAAAAGAAAGGAGTCAAGCGATCTGCAGATTTGTCTGCGGTCCCTGTGATAGAAGATTTTGAGGAAGATGAAATGAAAGATGTATGTCCTGACTTGTTTCTTTTTCCTTTCCCTTTTTGATGACATCTCATTTTCTTCTGTTGATGGGAAGTAACTTGCTCAACTTACACTCTTTATTACGCACAAGATTTGACTTCTGTGTTGAAAATTACCTCCTTTTTTATTAAGATTCAGTGACTATAATGACTTTATATTTTTATTACTCAATTTTTTAATTATGTTTCCCCTTCCATCATAAACCTCCCAAAATATTCCACTGACTAATGAAATAGAAATAATTTAGATCTGTCAATGTTCCATCACTTTTTTAATTTTCCATTTTGATCAATTCATATGTCTTAATTCTTCTTATTGTGATAGTTATCACTGAGTTGATAATTATTTAGAGGAAGGTATAGTAATTGAAAACATAATACTATGAAACCCCAGTGAATATTTTGAAACAAACAATTCCACACGATTGTTGTAATGTATTCTTTTTTTATTCTGTAATGTCATTGTATAAGAAAAGAGCTTGTGAATTGGATCTTAAATGTTCAGATTTTTGTTACAATCCTTCCTTTACTTAAGTTGGATTTAGTGCATTTTTATCTGAATTTTTGTTCATGTTTTCAGATATTGTCAGATCAGATTCATTGAGTCATATGTAATTGTCCAAGTTCTGCCCTTGCATTTTACCACAATTGGCACTGCAATAAAATTTATCATGTAATGCATATTGTGTTTTATTTTGATAAAGCATTGGCTATGTCTAATGAGCTGTAAATTTTCCTGCTCCTATATAATTATGATTATGATATCATTGGAAAAAGTATTTATTTGTCTTTCTGTTTATTTATGGTAGGCTGATAAGTTGATAAAGGAAGAAGTCCAATATCTTTGTGCCGCAATGGGACATGAAAATGAGCCCCTTGAAGAATTTATTGAAGCACATCGAACCTGCCTCAATGATCTTATGTACTTTCCTACCCGTAATGCATATGGTCTCTCCAGTGTTGCTGGGAACATGGAAAAACTAGCTGCTTTGCAAAATGAATTTGAGAATGTGAGAAAGAAATTGGATGATGATAAGGAGAAGATGGTACGGCTTGAGAAGAAGGTGACTGTTATCACACAAGGCTACGAGGTATGTGATGCTACATTTCTGTTTCTTGCTGAGCTGCTACATTAAACATGAAGTCTCGTGTTTTGCTTTCAAAGCTTGTATTAATTGTATCACTAATTTTTTAGAATCTTATTGGTTTTATTACCTCTGGAAAGTTAGTTTTTTGAATTTCTCATTTGTGTTTTGGCCATAAATAAGCCAAACTGAAAAGTGTTTCATAACGATAGTGGGAAATCAACTCGTTAGTGGAATACTCCTACGTTTCACAATGGTGGGAATTGAGAGAGAACACGAAGAAAGCAGGATTCTGTGCTTTGGTTTTTGCTATTGGACAAAATAAATGTTTTTTTTATATGTAATTCTAGATACACGTTACCTGAGTGTTTGCACATTCAATCTTGTATATATTTTAATTTGGCTATTGCATTTTCAGATGAGAGCAAAGAAAAGTATCTGGCCGCAAATTGAGGCCACTTTCAAGCATATGGATATAGCTGCAACCGAGTTAGAATGCTTTAAAGCTTTGCAAAATCAGGAGCAGTTAGCAGCATCCCACAGGATAAACAATTTGTGGAGTGAAGTACAGAAGCAAAAGGAACTTGAAAAAACTTTGCAAAACAGGTACGGGAGTCTAATTGAAGAGCTGGAGAAGATGCAAAATATCATAAACCAATGCAGATTAAAGGCAGAGCAGCAAAAAGAAATTGAAGCAAACAATGCTCATGCTGAGACTAATGAGACCAAAGTCGATGAAACTGATGTGCAGGATACAGGGAGTATTGTACCTCACTCAGCAGAGGATGGAAATGCTCAAGCAAAAACAGTCGAGTCATCACATGATGGAACTTCTGACCAGCAAGTTGGGATTATGCAAGACCAGTCGACTTCTAGCCCCAGCCATGACATGAATGTGGATTCTGATAACATGCATACAATACATGACAGTGATGCTAAATTAGCAAATGCTTCACCAGCTGCTGAGAATGTTGTTGAAAAAGTGGAAGGTAGTAGCCCTACTGATGGTTATACTGAGAATGGGGAGAACGTGTCAGAAATGGGTGCTTCAATGGAAATAAATAGCCCCAATCAAGATGTAGTTGCGAATGCTGTAACCACAGGTGAGAGCAGCATGGAAGAAACCAATGCTGTCACGGAGGAGGCAAATTAG