Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15901 LG4 12838433 12841556 PREDICTED: WUSCHEL-related homeobox 8-like isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 12838644 3_prime_UTR_variant
T/A 12838919 upstream_gene_variant
G/T 12839033 upstream_gene_variant
A/G 12839526 upstream_gene_variant
G/A 12839545 upstream_gene_variant
A/G 12839548 upstream_gene_variant
A/G 12839613 upstream_gene_variant
G/A 12839696 upstream_gene_variant
A/G 12839756 upstream_gene_variant
G/A 12839771 upstream_gene_variant
C/T,* 12839924 upstream_gene_variant
A/G 12840024 upstream_gene_variant
G/A 12840105 missense_variant p.Pro222Ser
G/T 12840531 missense_variant p.His80Asn
A/T 12840538 synonymous_variant p.Ser77Ser
A/T 12840685 upstream_gene_variant
C/T 12840749 upstream_gene_variant
C/T 12840878 upstream_gene_variant
T/C 12840928 upstream_gene_variant
G/T 12840936 upstream_gene_variant
G/C 12841020 upstream_gene_variant
T/A 12841027 upstream_gene_variant
C/T 12841109 synonymous_variant p.Glu46Glu
T/G 12841166 synonymous_variant p.Thr27Thr
C/A 12841192 stop_gained p.Glu19*
G/A 12841193 synonymous_variant p.Ala18Ala
T/A 12841317 upstream_gene_variant
A/G 12841318 upstream_gene_variant
C/G 12841426 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15901.1
MVNVMEWQKQSWQPNGNAEMMYVKVMTDEQLETLRKQIAVYATICEQLIEMHKTISSHQDLAGIRLGNMYCDPLLGSSGHKIASRQRWTPTAMQLQILERIFDQGTGTPSKEKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPGVNAESEVETEVDSKDKKTKADDFWSQLNVSAGPSDNLGFQNHDDLQYLNDNSESNKPDSVFPSDGSLRPTRNFNHVPVFDGLLSNPGNGYLTGKIEAPESYDLYQPSDDFDMAG*


CDS Sequence:
>Vu_15901.1
ATGGTGAACGTGATGGAGTGGCAGAAGCAGAGTTGGCAACCCAACGGTAACGCCGAAATGATGTACGTCAAAGTCATGACAGACGAACAACTCGAGACTCTCCGCAAGCAGATTGCGGTTTACGCAACAATCTGCGAGCAACTCATCGAGATGCACAAAACCATCTCTTCTCACCAAGATCTCGCAGGGATTAGGCTGGGAAACATGTACTGCGATCCTTTGTTGGGGTCTAGTGGGCACAAAATAGCTTCGAGGCAGAGATGGACTCCGACTGCTATGCAGCTTCAGATTCTGGAGCGGATATTTGATCAGGGAACTGGGACTCCCAGCAAGGAAAAGATCAAGGAGATCACTGCTGAGCTCAGCCAGCATGGCCAGATTTCTGAGACCAATGTTTATAACTGGTTTCAGAACAGGCGGGCTCGCTCCAAAAGAAAGCAACAGAATGTGGCACCCGGTGTTAATGCGGAATCAGAAGTAGAGACCGAGGTTGATTCCAAAGATAAGAAGACAAAGGCAGACGATTTTTGGTCCCAGCTCAATGTTTCTGCTGGGCCTTCTGATAATTTAGGTTTCCAGAACCATGATGATCTGCAGTACTTGAATGACAATTCAGAGTCCAACAAACCAGATTCTGTTTTCCCGTCTGATGGGAGTTTAAGACCCACTAGAAATTTCAACCATGTGCCTGTTTTCGATGGGCTGCTATCGAACCCCGGAAATGGCTATCTTACTGGAAAAATAGAAGCTCCTGAGAGTTACGACTTATACCAGCCATCAGACGACTTCGACATGGCAGGCTGA


Promoter Sequence:
>Vu_15901::LG4:12841556-12843556(-)
TTCGTGGGCATTTTATCAAACACCTTTCTTGCACTGTCCAAGTGACCCATTTTAGAGTACATCACAACAAGTCCAGTCCCAATAAAGACATCATACTCTAACTCCCTGCAAGCTATATCTTGGTGAATGGCAACTCCCTCATGGAAGTCCAAAGCACCAGTGCAAGCCTTCAAAACAAAGGTGAATGTGTACTTGTCAGATTCAAGTCCCACACATAACATTCTACGATACAATTTTATTGCTTCCTGGAATAAACGGAGTCTAGAATAGGCTCTGATCAACGAGTTCCACAGAATCAGTGATTTAGGTGTTGATTGAGCCAAGGTGCATTGTTCTGAGACCATTAAACGGGCATGGATTTGGAGCAAAGGGTTCAAGTGTTTGCATGAACGAAGAAGGTGAAAGTAGTAGTGATTATGGTTGCAATATTGTGGAATGTGGAGGGTCATTGGAGAAATTACAAAGGCATCGGAATGAACATGCTGTGGGTGATGGTATCTGTGAATTTGAAGTGAATGTCTCGGTATTATCATTCTCATTCTCAATCTCATTGACATGGTTAATCTTTCTTTTCATTACGTTTTAAAAATGTGATAAATTCTGCTGCATTCCAAATCAAAGTGAAGTTATATCAATAAATATGGAGATGGAAGAGAAAGTCTGTAAAAAATAATCCCACTATTCTATAATATCAGTAGATATTTCACGTTTTTAAAATAATAATGTTGTCAACATGCTATAAATAATATTATGTAATAAAAATGAAGTATAAAATTAGACATGGCTTAAAACAAATTTTATATAATCTTTTGACTGCTATTTCTTTGATAATGAATTAGTAATTTTTTAACGTTATTTAGATACTACGCGTATGTTGTAAGAAAAAAACCTTCTACTTGTATTTTTAATATGTCGTGTTTTTTACTTTATAGTACAAATTTCAACTAAATTCTTGTCTAGCATAAATTTAACTCTTGAAACAAACTTCAAACATTATTTATATTCTATTTAACTAAAATTCTTACTCAAATGTTCTAGGAAAAACTGAAAACATAACCTGTTTTAGTTTTTTAATATGATAAAAATATTATGATACTTTTATTATATCATTTAATATTATAAATTATGAAAAAAATTTATAAAAAGTATTGTATCTACTCGGTCTAATAAATGTGCTAAACAATGGTTCATTAAATTCATTACTTTGGAATAGTCTAAAATATGTCTATTCTAACAAATATTAACATTGAAGTAAATTTTTATTTTATTGAAATTGTTTAATATCATTTTATCAATTTTATAACATTGAACTCTAGAAATGAAATAAAACACTATCGTATTCTCTAAGAAATACTCATCCTCAATACTCATATTCATTTTTTCTAATTATAAAAATCTAAACTCTCTTACTATAAAAAAAAATCTTTTGAAGATAAATCTTTCCTTATATTTCAGTCATCAAATTACTAAAATAGTGTTGTCACGTGGATCTCGATAAAATCAAATATCAAATCATTATTTAATTTCAAATAAAATTTTACAAATATTTCTAAAATATTAATCACAAAAAAGAAATATTTTATTTTTTATAACAAAATATTACGTAATACCTGAATCTCTTATTCATCCTTACAAACTATATATAACTTTCTTAACTTAAAAACATAAATTACCTCTTCCTTTTCTATTTTACCCTCAAAACTAATCCTGAAAGTGTCCTCTAAAATAATAATACATTTAGCATTTTTATGTATCAAAATTTCTACATTATACAACAAATGCGTAAATTAAAATATTAAAAAGAGAAATTTTTGGTAAATAATTTTAAATCTTCCTAAAACACCTTGTCTATATAACATATTCTTATTTATCAAATAGATTATTACATTAAAATATTCTTATAAACCTTTAATTGTTTTTTTTTTTAAATATGAAATTTCTTGATTCCAAAAACTTTAGAAGGTTGCGAAATAAAAAGCCCAGAGCTAGTTAGGGACAGT


Gene Sequence:
>Vu_15901(-)
GAAATAATTTGTTTTGGACAAGAATATCCCTGGGACATTCTTGCTTTTTATTCTCTCCCCGCATCGTACGCCGCCGACACAGCTTCGAGTTTTGGCAAGTGCTAACATACGCCTCTGACACCAAAGCGACGCTCTCTGCTCCCATGTCAGATCTGAAACCTTTTCTCTTCCATTCTTAATTATCTCTGCTTCTCGTTTTCGTCGTTTCATGATTAGGGTTCACACTCTCAATTAAAATTAATTATTAAATAAAAATAAATATATAAGACATTGTCCACACGTGTTTGTGTGTGATCGCAGAGAGAAGGCGATGGTGAACGTGATGGAGTGGCAGAAGCAGAGTTGGCAACCCAACGGTAACGCCGAAATGATGTACGTCAAAGTCATGACAGACGAACAACTCGAGACTCTCCGCAAGCAGATTGCGGTTTACGCAACAATCTGCGAGCAACTCATCGAGATGCACAAAACCATCTCTTCTCACCAAGATCTCGCAGGTTTCGATTCATTTTTCACCGTTGTTAATTACATAGTTACTTGTTGTATGTTACAATGTGTGTTAGTTTGCTTTCCCTGACTCTTCAATTAGACTGTTATTAATTCAGCCATAAAGTTTTTCTCGCTCTGTACTACTTCCAAATTGGACAAGTATAACGTGTGAGCTAATTTAGTGAAGGAGTCCAAAAACAATTTTGATTATTAGCACTTGTTTATTGAATCGAAAGAGGAATATATTTTCAAGATGGTAATTAAATTTAATTTCTGTTCAAAGTAAGTGTATATTCTCTCAACCAGTTGGATTTGTTAGTCATAGTTTGAATAAATTCTAGGATGGGTATTGTAATAGTCAGCAAACATAACATGCATGATTTTTTTTTTTATATATGATTAGAGTGTAAACATCCTTTACATTGATGGTTTTTACTTTATTTAGTCGTAATAATAATGTTGTTTAATTGGTGTTTTCCGTGTCAGGGATTAGGCTGGGAAACATGTACTGCGATCCTTTGTTGGGGTCTAGTGGGCACAAAATAGCTTCGAGGCAGAGATGGACTCCGACTGCTATGCAGCTTCAGATTCTGGAGCGGATATTTGATCAGGGAACTGGGACTCCCAGCAAGGAAAAGATCAAGGAGATCACTGCTGAGCTCAGCCAGCATGGCCAGATTTCTGAGACCAATGTTTATAACTGGTTTCAGAACAGGCGGGCTCGCTCCAAAAGAAAGCAACAGAATGTGGCACCCGGTGTTAATGCGGAATCAGAAGTAGAGACCGAGGTTGATTCCAAAGATAAGAAGACAAAGGCAGACGATTTTTGGTCCCAGCTCAATGTTTCTGCTGGGCCTTCTGATAATTTAGGTTTCCAGAACCATGATGATCTGCAGTACTTGAATGACAATTCAGAGTCCAACAAACCAGATTCTGTTTTCCCGTCTGATGGGAGTTTAAGACCCACTAGAAATTTCAACCATGTGCCTGTTTTCGATGGGCTGCTATCGAACCCCGGTATGTAACTTCTTATCCTTTCTTCATGTACTTGTCTTTATATTAATCAAATAAAGGTAAGATTATTGTTTTTTAACGTTATACGTTGGAAGTGAGTTGATATGTGGCACAAAAATTACAGAAAGAGGAAAAACAAAATTGTTCAGTATTATTTAGTATTAGGCCGGATCATTGTGATCCTGGACCTAGTACTTTCCAGGAGGTATGGAAAAAAATATTCTAGGCATTCAAGGGGTCTAGTTCTAGTTTTTTCCCAATCTCCCAAGTCTCCATTCCTCTCATCCCACCATATGTTAGTGCAGATTCTTATCCCCTCACCCATTCGCACCACTATACAGTTAGTCTCTCTCTCCTCAGTTATGATGATTCTAACCTAATCACATAAACTTTGGTTACTTGGGGCCACTGGTTTGAATCGACTCTCCTCTCTTCAAAACTCATCTTGTTGTCCCTTCTACTTGATCAAGACCTCCACAATTCCCCGGGCATTCTGTCACGAGGATTTCATGGATGCACTTGACTTCTCTTAGCCATCTCCATAACAACTTTTCTGCAAGTTGTTTAAGTGATCAAGCTATCTTGCCATTATTTCTCGCCTTCCTATAATAACAAATCAACACGAGAAACCCCTAAGCCCCTTCACACCCACAAGTGAGCCAATCTAACATATTTTTATCTTGTTAGAATCCTGTTGAATTCCCCTGTTAAGAGATGATATGCCCTAAGTATTCCAACTAGTTCTGGATAAAAGAACAATTCTTCCTGTCAATATAGCTTGTTCTATCTCAACTCCTGCACCACCTTTTTTAGATGTTCTTGCAGAAATTGGTATTTCTATAATTGAGAAATTTGTGTTGATAATTACTTGTATAATTGACTTTCTTGGATTTGAGATTTTCTATATTTATAGGACGCGGCTTAGATCAAGTTCCTTACATCTCCGATTAAATGACGAGGCATGCATATTTATTTAAATTTGTTCTATACATCAAGCTATTTATTATTGGAAAGAATATTCGCATGTCATCATTTAAGTGTAGTACTTAATCTTACTTCTGTCATTGTCCAAAAATCCCTTTATATATATAATATGCTTTTAATATTCATGCATCTCCAGAAACCATTTTAGCGAGTCTCATTTTCTTGTGTATTAATTTAACTAGGCTATGGAGTATAGTGATGGAGCTTGCGTATGGTGAAAATTTCCTTCCTTGTTTTACTTAATACGGAATTTTAGAAAGGGTTGCTGTATCTTCATATGCGAGCCTTTCTTTATCAGAGAACTTGACAATCAAGCCTGTTATATTAATTTTTGCAGGAAATGGCTATCTTACTGGAAAAATAGAAGCTCCTGAGAGTTACGACTTATACCAGCCATCAGACGACTTCGACATGGCAGGCTGACAGTCATTGTAATTTCTGAGACTGTGATTAGCTGTAAAGAATTGCTGGTTTGATTTTGAGCTAGTGTGAATGAGAAAAATTGAACCAATTGAAACATGAGAACTTATAGCTTATAGTATATAGATACCACGATCTAAAATGGTAGTGGACATTTTACTTGATAATGGAATATATTTGGGAGTTCGTATTGATAGTGTGAAGTTGGCCTTTTTTA