Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15865 LG4 12523789 12527354 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, defense response, response to cold, seed development, protein phosphorylation, phosphorylation, cellular component biogenesis, seed development, cell wall organization or biogenesis, lipid biosynthetic process, shoot system morphogenesis, embryo development ending in seed dormancy, embryo development ending in seed dormancy, regulation of developmental process, shoot system development, shoot system development, seed development, seed development, embryo development ending in seed dormancy, cell growth, shoot system morphogenesis, embryo development ending in seed dormancy, embryo development ending in seed dormancy, phosphorylation, protein phosphorylation, post-embryonic plant morphogenesis, lipid biosynthetic process, lipid biosynthetic process, growth, response to cold
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane
Molecular Function   enables   protein binding, protein kinase activity, protein binding, protein kinase activity, protein kinase activity, protein binding, protein binding, kinase activity, protein binding, protein binding
SNP Position Effect Amino acid change
A/C 12523980 5_prime_UTR_variant
T/C 12524078 synonymous_variant p.Leu11Leu
C/A 12524094 stop_gained p.Ser16*
A/T 12524095 synonymous_variant p.Ser16Ser
T/A 12524200 synonymous_variant p.Ser51Ser
G/A 12524304 missense_variant p.Gly86Asp
G/C 12524602 missense_variant p.Met185Ile
G/A 12524621 missense_variant p.Gly192Ser
T/A 12524639 missense_variant p.Ser198Thr
T/G 12524767 synonymous_variant p.Pro240Pro
C/A 12524810 missense_variant p.Gln255Lys
C/A 12524818 missense_variant p.Asn257Lys
T/C 12525252 missense_variant p.Leu402Ser
C/A 12525315 stop_gained p.Ser423*
G/A 12525459 missense_variant p.Arg471Gln
C/T 12525463 synonymous_variant p.Asn472Asn
C/T 12525593 splice_region_variant&synonymous_variant p.Leu516Leu
T/G 12525642 downstream_gene_variant
G/T 12525679 splice_acceptor_variant&intron_variant
T/C 12525707 synonymous_variant p.Gly525Gly
C/T 12525714 missense_variant p.Pro528Ser
T/A 12525776 missense_variant p.Ser548Arg
G/C 12526052 synonymous_variant p.Arg640Arg
G/A 12526442 synonymous_variant p.Leu770Leu
G/T 12526954 missense_variant p.Arg941Met
G/A 12527066 synonymous_variant p.Gln978Gln
T/A 12527180 3_prime_UTR_variant
T/C 12527184 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15865.1
MSISQFRSRVLSFLISVSCFLTCLGNNDVPVQLNDDVLGLIVFKSDLQDPSSYLASWNEDDASPCSWQFVQCNPQSGRVSEVSLDGLGLSGKIGRGLEKLQHLTVLSLSHNNLSGSISPSLTLSNTLERLNLSHNSLSGSVPTSFVNMNSIKFLDLSENSFTGSIPENFFDTCSSLHHISLARNMFDGSVPGSLSRCSSLNSLNLSNNRFSGNVDFNGIWSLTRLRTLDLSNNALSGSLPNGISSIHNLKEILLQGNQFSGPLSTDIGFCLHLSRLDFSDNQFSGELPDSLGRLSSLSYFKASNNFFTSEFPQWIGNLTSLEYLELSNNEFTGSIPQSIGELGSLSHLGVSSNKLVGTIPSSLSSCTKLSVIHLRGNGFNGSIPEGLFGLGLEEIDLSRNELSGSIPAGSSRLLETLTSLDLSDNHLHGNIPAETGLLSKLSYLNLSWNDLQSQMPPEFGLLQNLAVLDIRNSGLRGSVPADICDSGNLAVLQLDGNSLQGNIPEEIGNCSSLYLLSLSHNNLTGSIPKSMSKINKLKILKLEFNELSGEIPMELGMLQNLLAVNISYNRLTGRLPTGRTFQNLDKSSLEGNLGLCSPLLQGPCKMNVPKPLVLDPNAYNNQISPQRQRNESSESGSVHRHRFLSVSAIVAISASFVIVLGVIAVSLLNVSVRRRLSFVDNALESMCSSSSRSGSPATGKLILFDSQSSPDWISNPESLLNKASEIGEGVFGTLYKVPLGSQGRMVAIKKLISTNIIQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVTEFAPNGSLQAKLHERLPSSPPLSWPMRFKILLGTAKGIAHLHHSFRPPIIHYNIKPSNILLDENCNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLECVDQSMNEYPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF*


CDS Sequence:
>Vu_15865.1
ATGAGTATTTCTCAGTTTCGATCTAGAGTTTTGAGTTTTCTGATTTCAGTTTCCTGTTTTCTGACATGCTTAGGAAACAATGACGTGCCTGTCCAGTTGAATGATGATGTTCTTGGCTTGATTGTGTTCAAATCAGACCTTCAAGACCCTTCTTCTTATCTTGCTTCATGGAATGAAGACGATGCCAGTCCATGTTCATGGCAGTTCGTGCAGTGCAATCCTCAGAGCGGAAGAGTTTCTGAGGTCTCATTGGATGGCTTGGGATTATCTGGGAAGATTGGAAGAGGGCTTGAGAAGTTGCAGCATCTTACGGTACTGTCCCTTTCTCATAACAACTTGAGTGGGAGTATCAGTCCATCTCTTACTCTTTCAAATACTCTTGAGAGACTCAACCTTAGTCACAATTCTCTTTCTGGTTCAGTCCCTACTTCTTTTGTGAATATGAATTCAATAAAGTTTCTTGATCTTTCTGAGAATTCATTCACGGGATCAATCCCTGAGAATTTTTTTGATACTTGTTCTTCCCTTCATCACATTTCTCTAGCTAGGAACATGTTCGATGGGTCGGTTCCTGGTTCACTGTCTAGGTGCTCCTCGTTGAATAGCCTTAATCTTTCCAATAATCGTTTCTCTGGTAATGTGGACTTTAATGGGATTTGGTCACTGACCAGGCTTAGAACTTTGGATCTATCCAACAATGCCTTATCTGGGTCTTTACCTAATGGAATTTCATCCATACATAACTTGAAGGAGATCCTATTACAAGGTAACCAGTTTTCAGGTCCTTTATCCACTGATATTGGATTCTGCCTGCATCTGAGTAGGTTGGATTTTAGTGATAATCAGTTCAGTGGAGAACTACCTGATTCACTTGGGAGGCTTAGTTCTTTGAGCTATTTCAAAGCATCAAATAATTTTTTCACCAGCGAATTCCCTCAATGGATTGGTAACCTTACCAGTCTGGAGTACCTAGAGCTTTCAAACAATGAATTCACTGGAAGCATCCCACAGTCAATAGGGGAACTGGGGTCACTGTCTCATCTGGGAGTTTCAAGTAACAAGCTTGTTGGAACTATTCCATCATCACTAAGTTCCTGCACGAAGTTATCTGTGATCCATCTCAGAGGCAATGGTTTCAATGGCAGCATTCCAGAGGGTTTGTTTGGCCTAGGATTGGAGGAAATAGACTTGTCCCGCAATGAATTGAGTGGCTCAATTCCAGCAGGATCTAGCAGGCTCTTGGAAACTCTAACCAGCTTGGATCTTTCAGATAACCATCTCCACGGGAATATCCCTGCAGAAACTGGTCTTCTTTCAAAACTAAGCTATTTGAATCTGTCTTGGAATGATCTTCAATCACAGATGCCTCCAGAATTTGGCCTCCTTCAGAATCTAGCAGTTTTGGATATTCGAAACAGTGGCTTGCGTGGTTCAGTTCCAGCAGATATATGCGACTCAGGCAATTTAGCTGTCCTCCAACTAGATGGAAATTCATTGCAAGGGAATATTCCAGAAGAGATTGGGAATTGCAGCTCTCTTTACTTGCTGAGTTTGTCTCACAATAACTTGACTGGTTCAATTCCGAAGTCCATGTCAAAGATAAACAAGCTAAAAATCCTGAAACTGGAATTCAATGAACTAAGTGGAGAGATACCAATGGAGCTTGGAATGCTTCAGAATCTACTTGCTGTGAACATATCATACAACAGGCTCACAGGCAGGCTTCCTACAGGTAGAACATTTCAGAACTTGGACAAAAGTTCCTTGGAAGGAAACCTGGGTCTATGCTCACCCTTGTTGCAGGGTCCGTGCAAGATGAATGTCCCCAAGCCACTGGTGCTTGACCCAAATGCATATAACAACCAAATAAGCCCTCAAAGGCAAAGAAACGAATCATCTGAGTCAGGATCGGTCCACCGGCACAGGTTTCTTAGCGTATCTGCCATTGTAGCGATATCTGCATCTTTTGTGATTGTATTAGGAGTGATTGCTGTTAGCCTGCTTAATGTTTCTGTGAGGAGAAGGCTATCATTTGTGGATAATGCTTTGGAAAGCATGTGCTCAAGCTCTTCAAGATCAGGGAGTCCAGCCACAGGAAAGCTAATCCTGTTTGATTCCCAGTCCTCACCTGATTGGATCAGCAATCCTGAGTCCTTGCTCAACAAGGCATCAGAGATTGGAGAAGGAGTCTTTGGAACCCTCTACAAGGTTCCATTGGGATCACAAGGTAGAATGGTCGCAATCAAGAAGCTTATATCCACAAACATAATCCAATATCCAGAAGACTTTGACAGGGAGGTAAGAATCCTGGGGAAAGCAAGGCACCCAAATCTAATAGCATTGAAAGGATATTATTGGACTCCTCAATTACAGCTTTTAGTAACTGAGTTTGCACCAAATGGTAGCTTGCAAGCCAAGCTACATGAGAGGCTTCCTTCTAGTCCTCCTCTTTCTTGGCCTATGAGGTTCAAAATTTTGCTTGGAACAGCAAAAGGGATTGCTCATTTGCACCATTCTTTCCGTCCACCAATCATCCACTACAACATAAAGCCAAGTAACATTCTGCTAGATGAAAATTGCAACCCCAAGATCTCAGATTTCGGGTTAGCTCGGCTTCTGACAAAGCTAGACAGGCATGTGATGAGCAATAGGTTTCAGAGTGCATTAGGATATGTGGCACCAGAATTGGCGTGCCAGAGCCTAAGGGTGAATGAGAAATGTGATGTGTATGGTTTTGGGGTGATGATCCTTGAGCTGGTGACAGGTAGGAGGCCAGTGGAGTATGGTGAAGACAATGTGCTTATACTGAATGACCATGTGAGGGTGCTGCTTGAGCAAGGTAATGTGTTGGAGTGTGTGGATCAAAGTATGAATGAGTACCCAGAAGATGAGGTATTGCCTGTTCTAAAGCTAGCAATGGTATGCACCTCTCAGATTCCTTCTAGCAGGCCAACTATGGCTGAAGTGGTGCAAATACTGCAGGTCATTAAAACACCAGTTCCTCAAAGGATGGAAGTGTTTTGA


Promoter Sequence:
>Vu_15865::LG4:12521789-12523789(+)
AAAATTCATTTATTTTACGGATTTTTGAATAAGAACTGCGGAAGCACAATGCATTTTTTTTTCTATAAGATAATAAGTTTTACTGTAGGAATAAACAAATTGAATAATATATAATAAAAAAATTTATGAATTATTGTGAAGATTTTGAGTATATATTGTTGTGAGTAGTCAAATTAAATAATATATATTATTGTGAAGATTTTAAGTTATTAATAACGACAACTTCACTGCTTCAAGATAAGTGAAAAATCTTGTATTAGATAAAAATAAGTAATACGAATAAAATTTATAAGAATAGTTTGTTTATATTTAATTGATGATAAAAATTTGTGTCTTTTCTAGTAAAAAATATCAGTAGTATCAGAATTTAGTTGATCTTACTAACAACTTGAATAAATATGATATAAAATAAGTAAAAATTCTATAAAGTTTAAGAATTTTCTACATTACAAAAATGTTCATTTAAAAAATATATATATCTCATTCATTAGTATTTTTATGTCTCCTTGAAAGATATTTACAATAACTTTCCTTATGTTTTAATTGTGTGGGTGTGGATCATAACATTTAAAAAAATTTATATGTAAATTTTCACATTAATTATATATTTCTAACTATGTTCCAAGTTTTAAAAATCAGAAATGTACTACATCAAAGAAACATACTACTAACCAGCAAGTAACATTAATAATATAAAAAAATGAAAGTAAATATAATTACTTTGACATTATTTGAATCAATTACATTCCAATTCATTATTTGTTGTCAGAATAGAGACTTTGGAAACATTGCAGGAAAGGTAAGTTGAACATGTTATTAAAAATTTAAAGAGATTATATGGTAACATTATTGTTAAGAACATTTATTCCTCTTGCTTTTCAAACTTTATATCTTATAATAAGCTTAAAACAACAATTATAGTAACAAATAAGAGAATATTAACAATATTAACTAAAATTTATCACAAATCACAAAGTTTTACATATCAGATTTTTATATATATTTCCTGAATTACATATCTGGCAGAAGAAAATTGTACCTGAAGTAAAGATATTCACATAAAAATCTCCATATTCTGCTACCATGGATGTAAAAGTGGTAGCTTTCATGTGTTGCCTCACTTAGAAAGGTGATACACTGAAAATTTGAATCTGATTTTCATTTCACAAGATAGCAACATGGTTTTTGTCACCTTCTGCTATAGCTATAAGATAGCTATAAGATATCTCATCATCTACAGCAACGCATTCTTATAATAATAGACTGACTATGACTCAGGATAAACAATATTTGCAACCAAAAAATTCTCATGACATACTTCAATTATTTAATTTTCTTCTGTATAATTTTATCATTCACTTTCTTATTTTTTATACACTTTTGCTTAAGCTATATTAACATTTTCTAGTTATCTAGTTGCTGCTATATATATTATTTTTTTATTGCATGTATACCAAATAGAATATTATTTTGATTTGAACTACAATCTCTCTCTAATAAATCAGAGTTTATTGTAGCAGATTCGAGATTCTTTTTTCTAGATTGAAGAGTGACTATTTTTCTTTTCTCAAATTTAAAATCAGCAGAGAAAAACAAACCACACAGCATTCTGCAGAGACAAGAGAAGGAAGTGTCATAGTATCAGTAGTTTAAACTAAAAAGTGGTTCCTCCTTATAGAGGCATCAAGATCAATGCATCATATCATTCAACAACACCATTCTCACGAATAAAAAACTGTTCCCATTTGAATGATAGTAAAACTACAAAACCTCACAAGGAAACAGTTAACATATATATACATGCTCACAAAATTATTCTTGAATTTACACTAAAAAATTGCATATTTAACTCACTGAATATTCGAAAACGAGAGAAAGGAAAGGCACAAGGAGGTAGAAGTTGTAGGACACGACAAAGGCTTGTTTGGACAAAGGCCTTGTAAGGTGTAATGGGGTGGCAATTTGTCAGTAGCTTAGCCACGTTTGTTGGACCAAAACTG


Gene Sequence:
>Vu_15865(+)
GTTTGATCACGGACTACACTAACAATACCATATTCACCCATTTTCTGCTTTCTTCAATAGCCATTTTTGTAAAATATTCTTCTCTCCTTCTCGTGAGCTCACATGTAAAATCGTTTTCGCAAATGTAGTGTAACATCTACCAGTCATTACAGTTTTCACATACTATGCTATCCCAAAGAGAAATAAGCCATAATCATAGCTGACTGCTAAAGATAGAAAGATAACTCCACCAGCCCCATCGAGAGGAAGAAGGACAAGAATGAGTATTTCTCAGTTTCGATCTAGAGTTTTGAGTTTTCTGATTTCAGTTTCCTGTTTTCTGACATGCTTAGGAAACAATGACGTGCCTGTCCAGTTGAATGATGATGTTCTTGGCTTGATTGTGTTCAAATCAGACCTTCAAGACCCTTCTTCTTATCTTGCTTCATGGAATGAAGACGATGCCAGTCCATGTTCATGGCAGTTCGTGCAGTGCAATCCTCAGAGCGGAAGAGTTTCTGAGGTCTCATTGGATGGCTTGGGATTATCTGGGAAGATTGGAAGAGGGCTTGAGAAGTTGCAGCATCTTACGGTACTGTCCCTTTCTCATAACAACTTGAGTGGGAGTATCAGTCCATCTCTTACTCTTTCAAATACTCTTGAGAGACTCAACCTTAGTCACAATTCTCTTTCTGGTTCAGTCCCTACTTCTTTTGTGAATATGAATTCAATAAAGTTTCTTGATCTTTCTGAGAATTCATTCACGGGATCAATCCCTGAGAATTTTTTTGATACTTGTTCTTCCCTTCATCACATTTCTCTAGCTAGGAACATGTTCGATGGGTCGGTTCCTGGTTCACTGTCTAGGTGCTCCTCGTTGAATAGCCTTAATCTTTCCAATAATCGTTTCTCTGGTAATGTGGACTTTAATGGGATTTGGTCACTGACCAGGCTTAGAACTTTGGATCTATCCAACAATGCCTTATCTGGGTCTTTACCTAATGGAATTTCATCCATACATAACTTGAAGGAGATCCTATTACAAGGTAACCAGTTTTCAGGTCCTTTATCCACTGATATTGGATTCTGCCTGCATCTGAGTAGGTTGGATTTTAGTGATAATCAGTTCAGTGGAGAACTACCTGATTCACTTGGGAGGCTTAGTTCTTTGAGCTATTTCAAAGCATCAAATAATTTTTTCACCAGCGAATTCCCTCAATGGATTGGTAACCTTACCAGTCTGGAGTACCTAGAGCTTTCAAACAATGAATTCACTGGAAGCATCCCACAGTCAATAGGGGAACTGGGGTCACTGTCTCATCTGGGAGTTTCAAGTAACAAGCTTGTTGGAACTATTCCATCATCACTAAGTTCCTGCACGAAGTTATCTGTGATCCATCTCAGAGGCAATGGTTTCAATGGCAGCATTCCAGAGGGTTTGTTTGGCCTAGGATTGGAGGAAATAGACTTGTCCCGCAATGAATTGAGTGGCTCAATTCCAGCAGGATCTAGCAGGCTCTTGGAAACTCTAACCAGCTTGGATCTTTCAGATAACCATCTCCACGGGAATATCCCTGCAGAAACTGGTCTTCTTTCAAAACTAAGCTATTTGAATCTGTCTTGGAATGATCTTCAATCACAGATGCCTCCAGAATTTGGCCTCCTTCAGAATCTAGCAGTTTTGGATATTCGAAACAGTGGCTTGCGTGGTTCAGTTCCAGCAGATATATGCGACTCAGGCAATTTAGCTGTCCTCCAACTAGATGGAAATTCATTGCAAGGGAATATTCCAGAAGAGATTGGGAATTGCAGCTCTCTTTACTTGCTGTAAGCATCCTATTTCTGAAGCCCAAGTTTTAGTTTTGGTGCACGTCTTTTTTGGAAGATACTAATTTGTTCTACTTTTATGCAGGAGTTTGTCTCACAATAACTTGACTGGTTCAATTCCGAAGTCCATGTCAAAGATAAACAAGCTAAAAATCCTGAAACTGGAATTCAATGAACTAAGTGGAGAGATACCAATGGAGCTTGGAATGCTTCAGAATCTACTTGCTGTGAACATATCATACAACAGGCTCACAGGCAGGCTTCCTACAGGTAGAACATTTCAGAACTTGGACAAAAGTTCCTTGGAAGGAAACCTGGGTCTATGCTCACCCTTGTTGCAGGGTCCGTGCAAGATGAATGTCCCCAAGCCACTGGTGCTTGACCCAAATGCATATAACAACCAAATAAGCCCTCAAAGGCAAAGAAACGAATCATCTGAGTCAGGATCGGTCCACCGGCACAGGTTTCTTAGCGTATCTGCCATTGTAGCGATATCTGCATCTTTTGTGATTGTATTAGGAGTGATTGCTGTTAGCCTGCTTAATGTTTCTGTGAGGAGAAGGCTATCATTTGTGGATAATGCTTTGGAAAGCATGTGCTCAAGCTCTTCAAGATCAGGGAGTCCAGCCACAGGAAAGCTAATCCTGTTTGATTCCCAGTCCTCACCTGATTGGATCAGCAATCCTGAGTCCTTGCTCAACAAGGCATCAGAGATTGGAGAAGGAGTCTTTGGAACCCTCTACAAGGTTCCATTGGGATCACAAGGTAGAATGGTCGCAATCAAGAAGCTTATATCCACAAACATAATCCAATATCCAGAAGACTTTGACAGGGAGGTAAGAATCCTGGGGAAAGCAAGGCACCCAAATCTAATAGCATTGAAAGGATATTATTGGACTCCTCAATTACAGCTTTTAGTAACTGAGTTTGCACCAAATGGTAGCTTGCAAGCCAAGCTACATGAGAGGCTTCCTTCTAGTCCTCCTCTTTCTTGGCCTATGAGGTTCAAAATTTTGCTTGGAACAGCAAAAGGGATTGCTCATTTGCACCATTCTTTCCGTCCACCAATCATCCACTACAACATAAAGCCAAGTAACATTCTGCTAGATGAAAATTGCAACCCCAAGATCTCAGATTTCGGGTTAGCTCGGCTTCTGACAAAGCTAGACAGGCATGTGATGAGCAATAGGTTTCAGAGTGCATTAGGATATGTGGCACCAGAATTGGCGTGCCAGAGCCTAAGGGTGAATGAGAAATGTGATGTGTATGGTTTTGGGGTGATGATCCTTGAGCTGGTGACAGGTAGGAGGCCAGTGGAGTATGGTGAAGACAATGTGCTTATACTGAATGACCATGTGAGGGTGCTGCTTGAGCAAGGTAATGTGTTGGAGTGTGTGGATCAAAGTATGAATGAGTACCCAGAAGATGAGGTATTGCCTGTTCTAAAGCTAGCAATGGTATGCACCTCTCAGATTCCTTCTAGCAGGCCAACTATGGCTGAAGTGGTGCAAATACTGCAGGTCATTAAAACACCAGTTCCTCAAAGGATGGAAGTGTTTTGATGCGATATGCTTCTCTGATGAACTAGCTTGTCATATAGAAAAATATCTGTTAACTACTAAGATTTTTTTTTTCTCTTTATGTTGTGTATCCTTTTCATTTTCCTTAGTAGCCATTTGGTTTATGTTGATTGTTCTTTTAAGTACAAGCAGATTTTCCTCGTATAAATGGAAATATTGCTATATAAATCCGTTATTCTC