Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15858 LG4 12470369 12472908 Disease resistance protein RPP13
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 12470375 missense_variant p.Ala796Val
C/A 12470390 missense_variant p.Ser791Ile
G/T 12470446 stop_gained p.Cys772*
C/A 12470459 missense_variant p.Cys768Phe
T/G 12470467 stop_lost p.Ter765Tyrext*?
G/A 12470475 synonymous_variant p.Leu763Leu
G/A 12470553 stop_gained p.Gln737*
G/T 12470573 missense_variant p.Ala730Asp
C/T 12470590 synonymous_variant p.Glu724Glu
G/A 12470712 missense_variant p.Pro684Ser
T/A 12470789 stop_lost p.Ter658Leuext*?
C/T 12470810 missense_variant p.Gly651Asp
T/C 12470896 synonymous_variant p.Leu622Leu
A/G 12470898 synonymous_variant p.Leu622Leu
T/C 12470904 missense_variant p.Thr620Ala
T/G 12471034 stop_lost p.Ter576Tyrext*?
T/A 12471142 missense_variant p.Glu540Asp
T/A 12471150 missense_variant&splice_region_variant p.Ile538Phe
T/C 12471155 splice_region_variant&intron_variant
T/G 12471216 upstream_gene_variant
A/T 12471292 splice_region_variant&intron_variant
T/G 12471294 splice_region_variant&intron_variant
T/A 12471462 stop_gained p.Arg483*
T/A 12471476 missense_variant p.Gln478Leu
A/C 12471523 missense_variant p.Asp462Glu
T/C 12471677 missense_variant p.Asn411Ser
A/G 12471759 missense_variant p.Trp384Arg
T/C 12472135 synonymous_variant p.Glu258Glu
C/T 12472160 missense_variant p.Gly250Asp
C/T 12472161 missense_variant p.Gly250Ser
T/C 12472173 missense_variant p.Lys246Glu
C/A 12472264 missense_variant p.Trp215Cys
G/T 12472300 missense_variant p.Asn203Lys
C/T 12472305 missense_variant p.Asp202Asn
G/A 12472406 missense_variant p.Ala168Val
G/T 12472475 stop_gained p.Ser145*
C/A 12472479 stop_gained p.Glu144*
T/C 12472563 missense_variant p.Ile116Val
A/G 12472889 missense_variant p.Phe7Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15858.1
MADGVVFFLLTNLSRLLEDEFTLLSGVEDKINSLCSELNFIDNFLKSSEGKCNDKVVKELLCQIRDVAFKAEDVVDTYVANITKHTTGNPLSKLLHLKERYMVLRKVNADIKTIKIRIEEIYKNRERYGIREGEFQSDEADAAESLRKRRRDVEEEDVVGLVHDSSFAIQQLIMESDSRRKVICIIGMGGLGKTTLARKIYDNNEVNESFTSRAWGYVSNDYRPRELFLSLLKCLLSASEYNDLFKKTTGGGEELSEEELKKRVAEVLKGKKYLVVLDDIWETQQWDKVKGAFPDHQTGSRILITSRDKEVAHYTGTTSPYYLPLLDKHESWELFSKKVFRGEECPSNLEPLGRSIVENCGGLPLAIVVLAGLVARKEKSEREWKRMKEVSWHLTEDMTQVMHILKLSYDNLPPRLKPCFLYFGIYPEDYEISARQLIQLWTAEGFIHQPETGAPSTAELEDFGDYYLDELVDRSMVQVATRRSDGGVKTCRIHDLFRDLCIIESKSHKFLEICTEVSIDTLPLSNARRLSLQCKERYLRIDTDVIKIPASIGNLRNLETLDVRYKETVSSEIWKLKRLRHVYLRGGDEVPEVDRERKVNLQTLWLRAFDRRMVFMLNRDMLIDDIFPRLRKLVLHYPFHRPSHEQLPTVRLPSLQHLRNLHSLKIIDFLELPPHKNDFPYHLTKITWKQIRVGTDFSLFSTVRWLTNLVGAGEFPQLQVFEMRGMKVRSWRLDECAMPNLQHLLIEACEYLNDLPQRLWSLATLRQVHALLPSETLANNLQHVKLTTACKLIISRC*


CDS Sequence:
>Vu_15858.1
ATGGCAGATGGTGTTGTTTTCTTTCTGCTAACGAACTTGTCACGTCTTCTTGAGGATGAATTCACACTGCTTTCTGGCGTGGAGGACAAAATCAACTCCCTCTGCAGTGAGCTCAACTTTATAGACAACTTCCTCAAGAGTTCTGAGGGCAAGTGCAACGACAAGGTTGTGAAAGAACTGCTATGCCAAATAAGAGATGTGGCCTTCAAAGCTGAAGATGTCGTTGACACCTACGTTGCCAACATCACCAAGCACACCACCGGAAACCCACTCAGCAAGTTACTCCACTTAAAAGAACGATACATGGTGCTTCGCAAAGTCAACGCTGACATAAAGACGATCAAGATCCGCATTGAAGAGATTTACAAGAACAGGGAGAGGTATGGCATCAGAGAAGGTGAATTCCAGAGTGATGAAGCGGATGCAGCAGAATCACTCCGCAAGAGAAGGAGGGATGTGGAGGAAGAAGATGTGGTGGGCTTAGTGCATGACTCCAGCTTTGCAATTCAGCAACTCATCATGGAAAGTGATTCACGACGAAAAGTTATTTGCATAATCGGAATGGGGGGGTTGGGCAAGACCACTCTTGCCAGAAAGATCTATGACAACAATGAGGTGAATGAATCGTTTACCAGTCGTGCATGGGGATATGTGTCCAATGATTATAGGCCTAGGGAGCTTTTCCTGAGCCTTCTGAAGTGTTTGCTGTCTGCGTCTGAATATAATGATTTATTCAAGAAAACAACGGGTGGAGGTGAAGAATTGAGTGAGGAAGAACTGAAGAAGAGGGTAGCAGAAGTGTTGAAGGGAAAGAAGTACCTGGTAGTGCTTGACGACATATGGGAAACCCAACAATGGGACAAGGTCAAAGGTGCTTTCCCAGATCACCAAACAGGTAGCAGAATACTAATAACAAGTCGTGACAAGGAGGTGGCACACTATACAGGAACAACTTCCCCCTACTACCTTCCCCTCCTCGATAAACACGAGAGTTGGGAACTCTTCTCGAAGAAAGTGTTTCGAGGTGAGGAGTGCCCTTCTAATCTAGAGCCTCTGGGTAGATCCATTGTTGAGAATTGTGGGGGTTTACCACTTGCCATAGTTGTTTTGGCAGGACTTGTTGCCAGGAAGGAGAAGTCAGAAAGAGAGTGGAAGAGGATGAAGGAAGTGAGTTGGCATCTCACAGAAGACATGACTCAAGTGATGCATATATTGAAGCTTAGCTATGACAACTTGCCTCCAAGATTAAAGCCATGCTTTCTGTATTTTGGAATCTATCCGGAAGACTACGAGATCAGTGCAAGGCAATTGATCCAACTATGGACAGCTGAAGGCTTCATTCATCAACCAGAAACAGGAGCCCCGAGTACAGCAGAGCTGGAGGATTTTGGTGACTACTACTTGGATGAGCTGGTGGATCGCAGCATGGTGCAAGTGGCAACCAGGAGAAGTGACGGTGGTGTCAAGACATGTCGGATTCATGATCTTTTCCGTGATCTCTGCATAATAGAGAGCAAATCCCATAAGTTTTTGGAGATTTGCACTGAGGTAAGCATCGATACTCTACCTTTGAGCAATGCTCGCAGACTGTCCTTGCAATGTAAAGAAAGGTATTTGAGAATAGACACAGATGTCATAAAGATTCCAGCTTCAATAGGAAACCTTAGGAATTTAGAAACGCTAGATGTAAGATACAAAGAGACTGTCTCGAGTGAAATTTGGAAGCTAAAGCGACTGAGACATGTTTATTTGAGAGGGGGAGATGAGGTACCAGAAGTAGATAGAGAGAGAAAGGTGAATCTTCAAACTCTGTGGTTAAGGGCTTTTGACAGACGAATGGTGTTCATGCTGAACAGGGACATGCTTATCGATGACATATTTCCAAGATTGAGAAAGCTTGTTTTGCACTATCCATTTCATCGTCCTTCCCACGAACAATTACCAACTGTAAGGTTACCGAGCCTGCAACACCTAAGAAATCTCCATAGCCTAAAAATAATTGACTTTCTAGAACTTCCACCTCACAAAAATGACTTTCCATATCATCTCACCAAGATAACCTGGAAACAAATACGTGTGGGCACTGACTTCTCTTTGTTCAGTACTGTACGATGGCTTACCAACCTTGTTGGTGCAGGAGAGTTCCCACAACTTCAAGTGTTTGAGATGAGAGGAATGAAAGTGAGAAGCTGGAGATTAGACGAATGTGCAATGCCAAATCTTCAACATCTTCTCATTGAAGCCTGTGAATACTTGAACGATCTTCCTCAACGACTCTGGTCCTTAGCTACCTTAAGACAAGTGCATGCTCTGTTGCCCTCTGAAACATTGGCGAACAACCTTCAACATGTGAAATTGACGACTGCTTGTAAGCTCATAATCTCTCGCTGTTAA


Promoter Sequence:
>Vu_15858::LG4:12472908-12474908(-)
TACTTGATTAAATGGATGAAAATTACTGTAGCATTTTGTAAAAGCAAAAGAAATTCATATTAGAAGTAAAAAAAAATGCAAAATTGTTTAGAATATGCTGAACCCTTCGGAATGTTGATTAAAATAATCTTTGACTTAATGATATTATAAAGATGAGCTTCCCCTGAAACCTTCGAGAACTTTCTTCCTTAACCATATATAGCATATACTGCATCCTGCCATTGAGCTTCTGATTTTGGAGAGAGTAAGAGTTTCCAGTTGGAGTTATCTCATAGCTGGAAATATTTTAACTGTTAACCTGTTTGATGATTCCTTTGTGCAGATTTGGGATGTTTTATCAAATGAAGAAGTCGTGGACATTGTAGCATCTGCTCCACGGTCTACTGCTGCTAGAGCACTGGTTGAGTCAGCTGTTCAGGCATGGAGGACAAAATATCCTTTTTGCAAGGTTGATGATTGTGCCGCGGTTTGCCTCTTCTTTGATCCAGATACAGATTTCAAGTCAAATGATACCAAAGGCAAGTTGGTATCCGAGGCATCTGTTGACCAATCTGAGGATTTATCTTGATGAAAAGGGAATTGGAACGGAAGCTGAAAAACAGCTCCAATAGCACAAGTTTTGTACCGTGTCTCTCCCAAGCCTTGCTGGTTTTATTGAGAAGGTTTGGAAAATTGTGCTGCAAAAGTCAAAAGAAAGGATCATTATTTTGATGATTTTTCGGTAGTTTTCTGCCAGTATTCTTTTCATTATTTATCTTTCATTTCCTTCGACAGCATTTGAGGGGCGAAAGAGGGGGGCTTATATATAAATATATTTCATATCTGGAGGAAAAGGGGTACCGGGCTATTTTTTTGCTGGAGGTCATTTTCCTTCTCTGTATATTTGGTAGATTTGGAGTTTTTGTAAATCCAAGTCATTAGATTCATATTATATAGTCTGTTCAATCTGTCGTTTTTCATTTTGCCTCATTCTTAGGATGTTTCATATTTCCAATTTAGTCAGTGAAAACATGAGAACTGAATAGAATTGGATTATTTCATATGGACCTTTTTGAGTCAGGTTTTTGTACCTCCATGTTGGGTTGCTGTCAGAGATTAATGATATTTTCCTGTGTGATTCGATTGTGTGGAAAAAATATGTTGTGAAGAAAATTTGTCTTTGATGTATACAAAAGCAAAACTGTATTTACCTTATGATTTTGATTTATCTTTTTACACGACTTTAACAAGATGGAAGGAATGTTTTTGTCATACAAGGCTTGCTCTATATTTTTCGGTAAAGCCATGCACTGTCTTTGGGGGATTGTATTTATAGTTTAAGATTTTTTAATTAGGATATGTCTAAAAACATAAAATTTATGTATGAATTTTGAATACTATTTGAGTTATAAAAGTACCCATTTTTTAATTTTGAAAATATTAATAACCTGTTTTATTCAAAGTGAGTTACATAAGATTCGATAAAAATGAAGAGATAGGAAATAAGTGAAGATGATTTACACGTTGGAGACTTAGGGCATTTTTTATAATACTTTTAAATATTTTATTTACTATTTATTAGTTTAAAATTCATAAGAAATTATAATTTTTGAGTAGTGGGTAGGAGAGATTCATTTAATAGTAGTAGATCAGAAAATTGTATTTTAGTGAATTAGAAAAAGTGTAGAAAAGAATGTTACAAAAGGTTTTAAAAGTCATCTGCTCTCGAATAATTTAAATAAAAAGCACTTTTCTATGAGGAAAGAAACCAGATTTTAAAGATGTGTTTGAGAACGTAGGTCCACGCTTTTTGGTGTGAACACCGCTTTTCATAATGGGAAGGGAAAGTAATACTTCGATAGACATCATATTTTAAACAAAACTATTTTACAATTTGTATAAAGAAAAGTCATGATCCTTAATAATGTAGAATCATCTGTGATTACCTCGTATTGCGTTTACTTGCGTGTAACAACACCCGTTTTGTTTGTGATTATTTCATTCTCAGCCGTTTCCGAGAC


Gene Sequence:
>Vu_15858(-)
ATGGCAGATGGTGTTGTTTTCTTTCTGCTAACGAACTTGTCACGTCTTCTTGAGGATGAATTCACACTGCTTTCTGGCGTGGAGGACAAAATCAACTCCCTCTGCAGTGAGCTCAACTTTATAGACAACTTCCTCAAGAGTTCTGAGGGCAAGTGCAACGACAAGGTTGTGAAAGAACTGCTATGCCAAATAAGAGATGTGGCCTTCAAAGCTGAAGATGTCGTTGACACCTACGTTGCCAACATCACCAAGCACACCACCGGAAACCCACTCAGCAAGTTACTCCACTTAAAAGAACGATACATGGTGCTTCGCAAAGTCAACGCTGACATAAAGACGATCAAGATCCGCATTGAAGAGATTTACAAGAACAGGGAGAGGTATGGCATCAGAGAAGGTGAATTCCAGAGTGATGAAGCGGATGCAGCAGAATCACTCCGCAAGAGAAGGAGGGATGTGGAGGAAGAAGATGTGGTGGGCTTAGTGCATGACTCCAGCTTTGCAATTCAGCAACTCATCATGGAAAGTGATTCACGACGAAAAGTTATTTGCATAATCGGAATGGGGGGGTTGGGCAAGACCACTCTTGCCAGAAAGATCTATGACAACAATGAGGTGAATGAATCGTTTACCAGTCGTGCATGGGGATATGTGTCCAATGATTATAGGCCTAGGGAGCTTTTCCTGAGCCTTCTGAAGTGTTTGCTGTCTGCGTCTGAATATAATGATTTATTCAAGAAAACAACGGGTGGAGGTGAAGAATTGAGTGAGGAAGAACTGAAGAAGAGGGTAGCAGAAGTGTTGAAGGGAAAGAAGTACCTGGTAGTGCTTGACGACATATGGGAAACCCAACAATGGGACAAGGTCAAAGGTGCTTTCCCAGATCACCAAACAGGTAGCAGAATACTAATAACAAGTCGTGACAAGGAGGTGGCACACTATACAGGAACAACTTCCCCCTACTACCTTCCCCTCCTCGATAAACACGAGAGTTGGGAACTCTTCTCGAAGAAAGTGTTTCGAGGTGAGGAGTGCCCTTCTAATCTAGAGCCTCTGGGTAGATCCATTGTTGAGAATTGTGGGGGTTTACCACTTGCCATAGTTGTTTTGGCAGGACTTGTTGCCAGGAAGGAGAAGTCAGAAAGAGAGTGGAAGAGGATGAAGGAAGTGAGTTGGCATCTCACAGAAGACATGACTCAAGTGATGCATATATTGAAGCTTAGCTATGACAACTTGCCTCCAAGATTAAAGCCATGCTTTCTGTATTTTGGAATCTATCCGGAAGACTACGAGATCAGTGCAAGGCAATTGATCCAACTATGGACAGCTGAAGGCTTCATTCATCAACCAGAAACAGGAGCCCCGAGTACAGCAGAGCTGGAGGATTTTGGTGACTACTACTTGGATGAGCTGGTGGATCGCAGCATGGTGCAAGTGGCAACCAGGAGAAGTGACGGTGGTGTCAAGACATGTCGGATTCATGATCTTTTCCGTGATCTCTGCATAATAGAGAGCAAATCCCATAAGTTTTTGGAGATTTGCACTGAGGTAAGCATCGATACTCTACCTTTGAGCAATGCTCGCAGACTGTCCTTGCAATGTAAAGAAAGGTCTAATATTTGTTCTTCTTTTCCGAAGTTATGTACCCACGTGGAATTCCAAAGGGTATCAAGAATGCTCGTGTGATATACTAAAAATCCAAAGGATCAATGAATTATTCACTACATGATACTTTTAAGACGATGATCCATCTAAGGTATTTGAGAATAGACACAGATGTCATAAAGATTCCAGCTTCAATAGGAAACCTTAGGAATTTAGAAACGCTAGATGTAAGATACAAAGAGACTGTCTCGAGTGAAATTTGGAAGCTAAAGCGACTGAGACATGTTTATTTGAGAGGGGGAGATGAGGTACCAGAAGTAGATAGAGAGAGAAAGGTGAATCTTCAAACTCTGTGGTTAAGGGCTTTTGACAGACGAATGGTGTTCATGCTGAACAGGGACATGCTTATCGATGACATATTTCCAAGATTGAGAAAGCTTGTTTTGCACTATCCATTTCATCGTCCTTCCCACGAACAATTACCAACTGTAAGGTTACCGAGCCTGCAACACCTAAGAAATCTCCATAGCCTAAAAATAATTGACTTTCTAGAACTTCCACCTCACAAAAATGACTTTCCATATCATCTCACCAAGATAACCTGGAAACAAATACGTGTGGGCACTGACTTCTCTTTGTTCAGTACTGTACGATGGCTTACCAACCTTGTTGGTGCAGGAGAGTTCCCACAACTTCAAGTGTTTGAGATGAGAGGAATGAAAGTGAGAAGCTGGAGATTAGACGAATGTGCAATGCCAAATCTTCAACATCTTCTCATTGAAGCCTGTGAATACTTGAACGATCTTCCTCAACGACTCTGGTCCTTAGCTACCTTAAGACAAGTGCATGCTCTGTTGCCCTCTGAAACATTGGCGAACAACCTTCAACATGTGAAATTGACGACTGCTTGTAAGCTCATAATCTCTCGCTGTTAA