Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15857 LG4 12463679 12466329 PREDICTED: putative disease resistance RPP13-like protein 3
Map

Annotations  
category   relationship type   keyword
Molecular Function   enables   ADP binding, ADP binding
SNP Position Effect Amino acid change
C/T 12463829 missense_variant p.Cys770Tyr
G/T 12463850 missense_variant p.Thr763Asn
G/C 12463873 synonymous_variant p.Val755Val
C/T 12463875 missense_variant p.Val755Ile
G/C 12463876 synonymous_variant p.Val754Val
T/A 12463880 missense_variant p.Asn753Ile
T/G 12463882 stop_lost p.Ter752Tyrext*?
T/C 12463883 stop_retained_variant p.Ter752Ter
A/C 12463890 missense_variant p.Ser750Ala
C/T 12463898 missense_variant p.Gly747Asp
T/A 12463919 missense_variant p.Lys740Met
C/A 12463943 missense_variant p.Gly732Val
C/T 12463944 missense_variant p.Gly732Arg
C/A 12463948 synonymous_variant p.Ala730Ala
A/T 12463957 synonymous_variant p.Ile727Ile
C/T 12463966 synonymous_variant p.Lys724Lys
G/A 12464010 missense_variant p.Arg710Cys
G/A,* 12464055 stop_gained p.Gln695*
C/G 12464059 missense_variant p.Leu693Phe
C/A 12464064 missense_variant p.Asp692Tyr
T/A 12464096 missense_variant p.Lys681Ile
C/A 12464207 missense_variant p.Arg644Ile
T/G 12464266 synonymous_variant p.Thr624Thr
A/G 12464289 stop_lost p.Ter617Glnext*?
C/A 12464301 missense_variant p.Val613Leu
C/G 12464302 missense_variant p.Arg612Ser
A/T 12464317 stop_gained p.Cys607*
A/G 12464322 missense_variant p.Phe606Leu
G/T 12464373 missense_variant p.Gln589Lys
C/T 12464374 synonymous_variant p.Gln588Gln
C/G 12464388 missense_variant p.Ala584Pro
C/G 12464418 missense_variant p.Glu574Gln
C/T 12464428 synonymous_variant p.Leu570Leu
A/T 12464443 missense_variant p.Ser565Arg
C/T 12464446 synonymous_variant p.Glu564Glu
T/A 12464452 missense_variant p.Glu562Asp
G/A 12464502 missense_variant p.Arg546Cys
G/T 12464509 missense_variant p.Asn543Lys
T/C 12464517 missense_variant p.Thr541Ala
A/T 12464577 stop_lost p.Ter521Lysext*?
T/C 12464578 stop_retained_variant p.Ter520Ter
A/G 12464614 synonymous_variant p.Ile508Ile
C/T 12464695 synonymous_variant p.Val481Val
T/A 12464703 missense_variant p.Arg479Trp
A/G 12464751 missense_variant p.Tyr463His
C/T 12464773 synonymous_variant p.Arg455Arg
T/C 12465125 missense_variant p.Gln338Arg
C/G 12465298 synonymous_variant p.Ser280Ser
T/G 12465425 missense_variant p.Gln238Pro
G/T 12465441 missense_variant p.Leu233Met
A/G 12465442 synonymous_variant p.Cys232Cys
T/A 12465446 missense_variant p.Lys231Ile
A/G 12465523 synonymous_variant p.Asn205Asn
T/C 12465570 missense_variant p.Ser190Gly
C/T 12465574 synonymous_variant p.Pro188Pro
T/C 12465583 synonymous_variant p.Arg185Arg
T/C 12465699 downstream_gene_variant
A/C 12465790 downstream_gene_variant
C/T 12465904 synonymous_variant p.Gln142Gln
C/G 12465970 missense_variant p.Glu120Asp
T/A 12466068 stop_gained p.Arg88*
T/C 12466073 missense_variant p.Lys86Arg
G/T 12466077 missense_variant p.His85Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15857.1
MVDSVVGFLVQRLSQLLESEIKLLSGVEEKIKSLNNELKFMDIFIKSSEGKYKDAVVKEVVTQIRDVAHKAEDVVDTYILNIAKHKRRNKLCRLFHLKEKLVVPHEVDAEIEKIKSRIDEIYKTRRGMASKKVNSKAKKQFQQNGAAKGGWMWRKKMLPKELFQSLLRSLNLSGFENLSEEDLKKKVAEELKGKTYLIVLDDIWKSRVWDDIKGAFPDDNKGSRVLITSREMSVARYAGTPSPYQLPFLTQDQSWELFCKKVFRGEECPSELEPLGRSIVEATCGGLPLAIVILGGLFAKKEKSQREWSRMKKMSWNSTAYKNEVMDILRLSYDNLPPTLKPCFLYFGIYPEDHKISAREVIRLWGAEGFIQPQENTELEEVGDFYLDELVDRSLVQVTDRRTDGGVKICQVHDVLRDFCISESKSCKFMDVCRESNIDTWSDTNPRRLSLQWQPESNISAMLFDKSMPSTRSVFIFTEDSESVDDLVKRLMLARVIHGFDSPLDPYHLKRMIHLRYLKIIVASLPACVCNLWNLETLDVNYQHTASSKIWKLKRLRRLYLRRGECPVLPEGTRMENLQSLWLCGRSSAIKSLINNGMFPRLVKLVLSPFSEGGNEVDLLSSVHSLNHLGSLKINKIPKLSSDKNVLPSKLTKITFRNFLNWSFMKTLGQLPNLQILKLEKTKIWKREKFYGFGAVIMQFYEDIMPEDEPHNLDIGKGEFNELQVFHLKGVGVKSWRLEEGAMPRLRHLLIIKCRHLFELPQHLWSLRTLQLVHIEGPSQQLAGSLQIVEFKNNCKIKLENENLAQRRSIDLMQVSGKL*


CDS Sequence:
>Vu_15857.1
ATGGTAGACAGTGTTGTTGGCTTCCTGGTGCAGAGGTTGTCACAACTACTTGAAAGTGAAATAAAGCTCCTTTCTGGTGTGGAAGAGAAAATAAAGTCCTTGAATAATGAATTGAAGTTCATGGATATCTTCATCAAGAGCTCAGAGGGGAAGTACAAAGACGCAGTGGTGAAAGAAGTGGTGACGCAAATAAGAGATGTCGCCCACAAAGCAGAAGATGTGGTGGACACTTACATTCTCAACATCGCCAAACACAAACGTAGAAACAAACTGTGTCGGTTATTCCACCTCAAAGAAAAACTCGTTGTGCCCCATGAAGTCGATGCTGAGATAGAGAAGATCAAGAGTCGTATCGATGAGATTTATAAAACCAGGAGAGGTATGGCATCAAAGAAGGTGAATTCCAAAGCGAAGAAGCAGTTTCAGCAGAATGGCGCCGCAAAAGGAGGATGGATGTGGAGGAAGAAGATGTTGCCCAAGGAGCTTTTCCAAAGTCTCCTAAGGAGCTTAAATCTTTCTGGATTTGAAAATTTAAGCGAGGAGGATTTGAAGAAGAAGGTAGCCGAAGAGTTGAAGGGGAAGACATATTTGATAGTGCTTGATGACATATGGAAATCACGGGTTTGGGATGACATAAAAGGAGCCTTTCCAGATGACAACAAAGGTAGCAGAGTATTGATCACAAGTCGTGAAATGTCTGTTGCACGCTATGCAGGAACCCCTTCTCCATACCAACTTCCTTTCCTCACCCAAGATCAAAGTTGGGAACTATTTTGTAAGAAGGTGTTTCGAGGTGAAGAATGCCCCTCCGAGTTAGAGCCTTTGGGTAGATCCATTGTCGAAGCAACTTGTGGGGGTTTACCACTTGCCATTGTGATCTTAGGTGGACTCTTTGCAAAGAAGGAGAAGTCACAAAGAGAGTGGTCGAGAATGAAGAAAATGAGTTGGAATTCTACTGCATACAAGAATGAAGTGATGGATATATTAAGGCTCAGTTACGACAACTTGCCTCCAACATTAAAGCCCTGTTTTCTATATTTTGGAATCTATCCTGAAGACCACAAGATCAGTGCAAGAGAAGTGATCCGATTGTGGGGAGCAGAAGGGTTCATTCAACCACAAGAAAACACAGAACTCGAAGAAGTAGGTGACTTTTACTTGGACGAGCTGGTGGATCGAAGCTTAGTGCAAGTGACTGATAGGAGGACTGATGGGGGTGTTAAGATATGTCAGGTTCATGATGTTCTTCGTGATTTCTGTATATCAGAGAGCAAATCTTGCAAGTTTATGGATGTTTGCAGAGAGTCCAATATTGACACCTGGAGTGATACCAATCCCCGTAGATTGTCCTTGCAGTGGCAACCGGAATCTAATATTTCTGCCATGTTATTTGACAAATCAATGCCAAGCACTCGTTCGGTGTTCATTTTTACTGAGGATAGTGAGTCTGTGGATGATTTGGTGAAAAGGTTGATGTTAGCTAGGGTTATTCATGGTTTTGATTCACCATTGGATCCCTACCATTTGAAGAGGATGATTCATTTAAGATACTTGAAAATAATAGTCGCAAGTCTTCCAGCTTGTGTATGCAACCTATGGAATTTAGAAACACTAGATGTAAACTACCAACACACAGCGTCCAGTAAAATTTGGAAGCTGAAACGATTGAGACGTCTTTACTTGAGAAGGGGAGAGTGTCCAGTCTTGCCTGAAGGAACTAGAATGGAGAATCTCCAAAGCCTTTGGTTGTGCGGTCGGAGTTCAGCAATTAAGTCCCTGATCAACAATGGCATGTTTCCTAGGTTGGTAAAATTAGTTTTGTCACCTTTTTCTGAGGGTGGTAATGAAGTAGACCTTTTATCAAGTGTACACAGCCTAAATCATCTTGGTAGTCTAAAAATAAATAAGATTCCAAAACTTTCATCAGACAAGAATGTGCTTCCATCAAAACTTACCAAGATAACCTTTAGAAACTTTTTGAATTGGTCTTTCATGAAGACACTAGGTCAGCTTCCTAACCTTCAAATTTTGAAACTAGAAAAAACCAAAATTTGGAAACGAGAAAAGTTCTATGGATTTGGTGCAGTAATAATGCAATTTTATGAAGACATAATGCCGGAAGATGAACCGCATAATCTTGATATTGGCAAGGGAGAGTTTAATGAACTTCAAGTGTTTCATTTGAAGGGCGTAGGGGTAAAGTCATGGAGATTAGAGGAAGGTGCAATGCCCCGTCTTCGGCATCTGCTCATTATAAAATGTCGTCATTTGTTTGAACTTCCCCAGCACCTTTGGTCATTGAGAACCTTGCAACTTGTGCATATTGAGGGACCCTCCCAACAATTGGCTGGCAGCCTCCAAATTGTGGAGTTCAAGAACAATTGTAAAATCAAATTGGAAAATGAGAACTTAGCTCAGAGGAGGAGTATTGATTTGATGCAAGTTAGTGGAAAATTATGA


Promoter Sequence:
>Vu_15857::LG4:12466329-12468329(-)
TATTAATAAAGGCTACTATACTTCCCTAAAGTTATTTGCAACATGTAGAAAAGGAATTGCCTAATTATTAAGTTATGTTTCTTGAACATAACACGTAAGCATATCTCCTCCACAAGTAAGAATCACTTCCTTCTCTATTTATACATGTTTGTTCTTCAGTTCTGCATTAATTTTGTTCACATTTTCCATTTTAATCCGTAAGAACACGAGAACTGGAAGTGAGATTTGTTTGGCGTATGATTTGGAATCAGGTTTATGTTGCATCGACTTGTATTATGTTATTGTGAAACTTTTAAATCTATGGTGACTTTAAAGTATGATTATTATGTTGTATATTTTGTAGGCACATCCATAACATTCGAATCTTTGGAAGGATATGGAGTTTGAAGCTTGGTAGAAGAAAACGAATTTTAAGGTAGGTAGGTATGACATGCATATATAAAAATTTATTATACCATTACGTAACTTGAGTTTTGTTGCCCTAATGTTACTTGAATCGGCAAAGGAGGTAGAGCTATGTTTATGCACAAAAAGTGAAGAAGTGAAGAAGGTGAAACTCGACCACTGTATCTAAGAGGTAAGTTCACTGTTATTTCATATCTAATATGCTATTATGAGCTCATTTTATATTAGTAATGATTTGTATAGTTCATCATAAAGTAATGATTTAAGAACTAAACTAATGTTTGAGAATGATGAAAACATCAACTGTAAAAGTTGTGTAAACAAAAGTATATGTTTACTTGTGAAGGAACAATTTTTAGATTATGGACCAAATCACTCAAAAGATTACATTACAAATTTGAGATATGAATTGTATAGATAAGTGAAACTAAAAGTAAATATTAGTTAGTGATTTTAGAAGTTAGGAAAAACATTAGAAAATGCATTTTTAACGAATGATTTGTCTGCGAAAATTATAATTTCGGGTAAATGGCTTAACAAGGATTTTAACCTTCAATTATATAAAAATAAACATCAGTTAATTTTTTTTGTAGTGTTATATATACGATAATCACAAGATCTGTGTGTAGAAAACAATGTTAAACAATTTGTTAAAATTTTGTTTGGTAGTAATTAAGAAGAGTAAAACATGAGAAAAATTATATCTTTTGGACTATAGGATATGATAATTCAAGTAGCCTTTTAGTTGAAACTAACTTACAAAGTGATCCAATTATTCCCTAATAAAAGAAAGTGACTTAGACATCACAATTTAAATAGCTTTTCCTTTTATTAAGGTTGTTTATACCTATGGTTGAGATGTTTAATTAATTGTAATAGTAAAATAGATAATTTTTTGTGTATAATATCCTATTTTTAAAAGTTATGCAATAGTCATAATATCCTTAAAAATATAATAGATAAACTAATTCAAGTGTATGTAAATATTAAAACTTTTGTAAGTATTACTACTATTATATTTTTTACTTTTATAATTTACTGCTATTGTATGAAAGCAAATAAAAAAAATTAATGAAGGACCAAACTTATTGAAAGATACATTGACACTCCTTCTTAAAAGGTGTACTGTAAAATGGATTTTAAATAAACTAGCATGATAATCACAGTTTAAACATTACATCATAGGAAAAATATTATACTTTAATATTAAGGGGTTTCCATAAGTTCTTTTTTCATGTCTAAAAGTAACAATTATTTTAAATAGTTTATAATTTGGTAAAAATGTTATTAACCAAGCTTTATTTAAATTTATATAATTTAATATAATATTAAACAAAATAAGGCAAAATCAAGTTTTCAAATAACTCTGGATAACCTAAACAATGAGTCTACGAAAGATAGTGATCAAGAATTCATCATTATTGTATTTTTCGTCTTCTCTCTTTGCATGTTAAAGAGATAGTTTCAAAGGTATAAATCACAAACCCATGTATTGAGAATAAGAATGTTTTTCATAAATGTAAAAAATGGATATTACTTATTACTCCCTGTTGTAAATTGACGAATGCTCGTACTTAGATACAGAGATAACAAAA


Gene Sequence:
>Vu_15857(-)
ATGGTAGACAGTGTTGTTGGCTTCCTGGTGCAGAGGTTGTCACAACTACTTGAAAGTGAAATAAAGCTCCTTTCTGGTGTGGAAGAGAAAATAAAGTCCTTGAATAATGAATTGAAGTTCATGGATATCTTCATCAAGAGCTCAGAGGGGAAGTACAAAGACGCAGTGGTGAAAGAAGTGGTGACGCAAATAAGAGATGTCGCCCACAAAGCAGAAGATGTGGTGGACACTTACATTCTCAACATCGCCAAACACAAACGTAGAAACAAACTGTGTCGGTTATTCCACCTCAAAGAAAAACTCGTTGTGCCCCATGAAGTCGATGCTGAGATAGAGAAGATCAAGAGTCGTATCGATGAGATTTATAAAACCAGGAGAGGTATGGCATCAAAGAAGGTGAATTCCAAAGCGAAGAAGCAGTTTCAGCAGAATGGCGCCGCAAAAGGAGGATGGATGTGGAGGAAGAAGATGTTGTGGGCTTAGTGAATGAGAGCGACATTGTCATTCAACAGCTCCAGAAAGACGATGTGCGTCTTAATTTTGCTTCTATAGTCGGAATGGGAGGATTGGGTAAAACCACTCTTGCCCGTAAGATCTATAACAAGGACAATGTGAAGAGGATGTTTCCTTATCGTGCATGGGGTAACGTGTCTAACGATTACAGGCCCAAGGAGCTTTTCCAAAGTCTCCTAAGGAGCTTAAATCTTTCTGGATTTGAAAATTTAAGCGAGGAGGATTTGAAGAAGAAGGTAGCCGAAGAGTTGAAGGGGAAGACATATTTGATAGTGCTTGATGACATATGGAAATCACGGGTTTGGGATGACATAAAAGGAGCCTTTCCAGATGACAACAAAGGTAGCAGAGTATTGATCACAAGTCGTGAAATGTCTGTTGCACGCTATGCAGGAACCCCTTCTCCATACCAACTTCCTTTCCTCACCCAAGATCAAAGTTGGGAACTATTTTGTAAGAAGGTGTTTCGAGGTGAAGAATGCCCCTCCGAGTTAGAGCCTTTGGGTAGATCCATTGTCGAAGCAACTTGTGGGGGTTTACCACTTGCCATTGTGATCTTAGGTGGACTCTTTGCAAAGAAGGAGAAGTCACAAAGAGAGTGGTCGAGAATGAAGAAAATGAGTTGGAATTCTACTGCATACAAGAATGAAGTGATGGATATATTAAGGCTCAGTTACGACAACTTGCCTCCAACATTAAAGCCCTGTTTTCTATATTTTGGAATCTATCCTGAAGACCACAAGATCAGTGCAAGAGAAGTGATCCGATTGTGGGGAGCAGAAGGGTTCATTCAACCACAAGAAAACACAGAACTCGAAGAAGTAGGTGACTTTTACTTGGACGAGCTGGTGGATCGAAGCTTAGTGCAAGTGACTGATAGGAGGACTGATGGGGGTGTTAAGATATGTCAGGTTCATGATGTTCTTCGTGATTTCTGTATATCAGAGAGCAAATCTTGCAAGTTTATGGATGTTTGCAGAGAGTCCAATATTGACACCTGGAGTGATACCAATCCCCGTAGATTGTCCTTGCAGTGGCAACCGGAATCTAATATTTCTGCCATGTTATTTGACAAATCAATGCCAAGCACTCGTTCGGTGTTCATTTTTACTGAGGATAGTGAGTCTGTGGATGATTTGGTGAAAAGGTTGATGTTAGCTAGGGTTATTCATGGTTTTGATTCACCATTGGATCCCTACCATTTGAAGAGGATGATTCATTTAAGATACTTGAAAATAATAGTCGCAAGTCTTCCAGCTTGTGTATGCAACCTATGGAATTTAGAAACACTAGATGTAAACTACCAACACACAGCGTCCAGTAAAATTTGGAAGCTGAAACGATTGAGACGTCTTTACTTGAGAAGGGGAGAGTGTCCAGTCTTGCCTGAAGGAACTAGAATGGAGAATCTCCAAAGCCTTTGGTTGTGCGGTCGGAGTTCAGCAATTAAGTCCCTGATCAACAATGGCATGTTTCCTAGGTTGGTAAAATTAGTTTTGTCACCTTTTTCTGAGGGTGGTAATGAAGTAGACCTTTTATCAAGTGTACACAGCCTAAATCATCTTGGTAGTCTAAAAATAAATAAGATTCCAAAACTTTCATCAGACAAGAATGTGCTTCCATCAAAACTTACCAAGATAACCTTTAGAAACTTTTTGAATTGGTCTTTCATGAAGACACTAGGTCAGCTTCCTAACCTTCAAATTTTGAAACTAGAAAAAACCAAAATTTGGAAACGAGAAAAGTTCTATGGATTTGGTGCAGTAATAATGCAATTTTATGAAGACATAATGCCGGAAGATGAACCGCATAATCTTGATATTGGCAAGGGAGAGTTTAATGAACTTCAAGTGTTTCATTTGAAGGGCGTAGGGGTAAAGTCATGGAGATTAGAGGAAGGTGCAATGCCCCGTCTTCGGCATCTGCTCATTATAAAATGTCGTCATTTGTTTGAACTTCCCCAGCACCTTTGGTCATTGAGAACCTTGCAACTTGTGCATATTGAGGGACCCTCCCAACAATTGGCTGGCAGCCTCCAAATTGTGGAGTTCAAGAACAATTGTAAAATCAAATTGGAAAATGAGAACTTAGCTCAGAGGAGGAGTATTGATTTGATGCAAGTTAGTGGAAAATTATGA