Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15831 LG4 12198407 12199611 PREDICTED: transcription factor DICHOTOMA-like isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, flower development, regulation of transcription, DNA-templated, regulation of secondary shoot formation, regulation of transcription, DNA-templated, regulation of secondary shoot formation
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, sequence-specific DNA binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA binding
SNP Position Effect Amino acid change
T/A 12198435 synonymous_variant p.Gly357Gly
C/G 12198620 missense_variant p.Gly331Ala
C/A 12198882 missense_variant p.Gly244Cys
G/T 12198900 missense_variant p.Gln238Lys
T/A 12198910 missense_variant p.Glu234Asp
C/T 12199096 synonymous_variant p.Ser172Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15831.1
MFPSSNYTSSGSYPRFPSSSSSASPYPSFTFLHPENSSASTTFLHDPLSVTFIPTNYHAPIPETLANWAVADCAAAAMLNQDLGGALYGITKKPAKKTAKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSADSFEFSSSSDGEVVSVIHQDQRQQQGMDFEEGKLKEAAYCVKAKMKESREKARARARERTSCKILCSGEGKVQELKKKGPATENHQILNQLRSPLQLHPQDVDGGVPRDDDFNVIEESIVIKRKLKHSLMSSIHHQNAVIPKEASVNNSDYHSFPNLSPNWEANNGANGRSTFCAIASMNLSAGLQIFGKSWEECTNPHPT*


CDS Sequence:
>Vu_15831.1
ATGTTCCCTTCTTCTAATTACACCTCCTCGGGCTCTTACCCTCGTTTCCCTTCTTCGTCTTCTTCTGCTTCGCCCTACCCTTCTTTCACTTTCCTTCACCCTGAAAATTCTTCTGCCAGCACCACCTTTCTCCATGATCCACTTTCTGTTACCTTCATACCGACTAATTATCATGCTCCGATTCCTGAAACACTGGCCAATTGGGCAGTTGCAGATTGTGCCGCTGCGGCAATGCTCAATCAGGATCTCGGTGGTGCCCTTTATGGCATCACCAAGAAACCTGCGAAGAAAACGGCCAAGAAAGACAGGCACAGCAAGATTCACACTTCTCAGGGCTTGAGGGACCGGAGGGTGAGGCTGTCCATTGAGATCGCACGCAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGATAAAGCCAGCAACACCCTTGACTGGCTCTTCACAAAGTCTAAGAAGGCGATTAAGGAGCTAACTCGAAGCAAGCACAGTGCTGATAGCTTCGAATTCTCCTCGTCTTCGGATGGTGAAGTGGTTTCTGTCATCCACCAAGACCAACGACAGCAACAAGGGATGGACTTTGAAGAGGGGAAGTTGAAAGAAGCTGCCTATTGTGTTAAAGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGAGAAAGGACTAGTTGCAAGATACTGTGCAGTGGTGAAGGGAAGGTGCAAGAGTTGAAGAAAAAGGGCCCTGCAACTGAAAACCATCAAATCCTGAACCAATTAAGGTCACCCCTTCAACTTCATCCTCAAGATGTAGATGGAGGAGTGCCAAGAGATGATGACTTCAACGTTATTGAGGAATCCATTGTCATCAAGAGAAAGTTGAAACACTCTCTGATGTCTTCCATTCATCACCAAAACGCTGTGATCCCTAAGGAAGCAAGTGTGAACAACAGTGACTACCACTCCTTCCCCAATTTGTCGCCAAATTGGGAAGCTAATAATGGTGCCAATGGACGCTCCACCTTTTGTGCGATAGCCAGCATGAATCTATCTGCAGGGCTTCAAATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTCATCCTACCTAA


Promoter Sequence:
>Vu_15831::LG4:12199611-12201611(-)
TCAGTTTTGATGAGAAATAAAAGAGAATGTAAGTTTGAGTAAGTCTTTATATGCTGTGAAAGTGTTTTTTACATTCTTTAGTTTTACACTTATATTAATAATATGCGTTTTTAAAAATATAACAGAAAATAATTGGATTGCTAGGTTTTATTAAGTAGTTAATAACTTATTTGTTGATAGTAGTTTATGTATAAGATGTTATGAAAACTATATATGACATGTCAATATGAATTTTTTTACTTGTTTTCTATTAACTAATTAAAAATCACTAAAAGGATATTAAAATGCCTTATAATGCATGATTAGAAAATATAATATAAAAAAAATTATCTTTGTACTAGTACAATTTAATTAAATGACTTGTAAATGAAAATCCGCGATTTATTTATTTACACTTTGATAGTATGATGAAACCATGTAAGCAAAAAAAAATACATATATCGAAAAAAAATATTAGTCATTGAGTGATTAGTTTATGTAAAAATAAGTTTTTTTTAATCGCTATAAACACTTCCCGTCTAATTAGGATTTGTGATACTAAAAAATAATAAATATTGATTGATGTAAAGTTTTATTTATATTGATAACGTAATTTATTTCTTAGAATAAAATCTTATTCATTAAAACGGGCATAACTTTAACATTTATTAACTACTATACATGACTTTATAAGTGATGGGATTTTTTATTTTGTAATTCAATCAGTAATTAATTTAAAATTCATAATGAAAAACTAAATTTTCAAATTATTGATCGAGAAAGTGTGGTATCCCTATCCTTTGAAATTTCTCTTTTCTAAAAGTTTAATGTAAAATAAGATCTGAACCGAATAAGAAGACTTGCACCATATTGAAAGCTTCTTAACCTCATGTTCCTTGGGAAAAGTGAATCCAACAATTTTACTGTGCAATTTCTTCTGCAGAAAAAAGTCACCCCATCTCCTTTAAATTTGCAGAAGAAAAATAAAAACACGATAGTTAAGTTCTGTTAAGCTATCCATAATCCAATTTAATTATAACTTCTTTCGGAAACATATTACTTAGAATCTATATATTGTTTATTTCACATTAAACACCCTAAACATAGAATAGTAAAATTGATAAAAAATAATAAAAGCGGAAGAGAAAAATAGAAGAAATGTTTTACTTTGATCGCTGACAATATATTATGGTGGCATTTTATAATTCAGAAAGGGAGATAAGAAGAAGAAAAAAAGTATACAAAAGAAACATACAAAAAGTTTCATAAATATAATGCAAACGTCATAGTGTTAGTGTCAATCATTCGAAAAGTATCATCACTGTAACTTTGATTAATAAAATATATGAGGAAAAATGATGGTTATCTGAGTAAACCTAATTTCCCAATTTGTTTTTAAAGTGTGTGCAACCGAAGTTTAACCCTAAATCCAACGGATCCACGCGAAGCCAGAGAATTACACCAAAATAACGTACACAAAACACATATATTAACGGGCTCAAAAGCTCCATGATTTGACCTTCTTCTGTTTACATTGCTTCCACATAATGAGGCACACAATCCACCAATTATGTGTGTCTTATCCTCTGTGTTATGCTACTCATACATACTACACTCTTTCTTTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTTTCTCCAGAGTCCCCACCCTTTTGGTACCATTCTTCATGGTCCTGCACCACCACACCTGATAAATATGAAGCTCTATTCCAAGTATAATGGAAACTGTGAAAAGCAGACCATACTTCCAACATTGGCCTAAAGCTTTCATCACTTTCTCAAATAAAACCACTTTCTTTTTCCTTGTAATCCACTACCAAATGCTTCATATCTATGTTGTCTTGAAAAAAGTGTATACTTAGAGCTAGGGAAGCTAAGTGGGAAGGTAGATAAGAAACTGAAACCTCTTCTGCGTTTGGGGTGGTCCTCATTCTGCAGAAGCTGTCTAGGGTTTTCTCCTTCATCCGTTGGAAATTGCAAAAAATCTGTTTATGTGAG


Gene Sequence:
>Vu_15831(-)
ATGTTCCCTTCTTCTAATTACACCTCCTCGGGCTCTTACCCTCGTTTCCCTTCTTCGTCTTCTTCTGCTTCGCCCTACCCTTCTTTCACTTTCCTTCACCCTGAAAATTCTTCTGCCAGCACCACCTTTCTCCATGATCCACTTTCTGTTACCTTCATACCGACTAATTATCATGCTCCGATTCCTGAAACACTGGCCAATTGGGCAGTTGCAGATTGTGCCGCTGCGGCAATGCTCAATCAGGATCTCGGTGGTGCCCTTTATGGCATCACCAAGAAACCTGCGAAGAAAACGGCCAAGAAAGACAGGCACAGCAAGATTCACACTTCTCAGGGCTTGAGGGACCGGAGGGTGAGGCTGTCCATTGAGATCGCACGCAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGATAAAGCCAGCAACACCCTTGACTGGCTCTTCACAAAGTCTAAGAAGGCGATTAAGGAGCTAACTCGAAGCAAGCACAGTGCTGATAGCTTCGAATTCTCCTCGTCTTCGGATGGTGAAGTGGTTTCTGTCATCCACCAAGACCAACGACAGCAACAAGGGATGGACTTTGAAGAGGGGAAGTTGAAAGAAGCTGCCTATTGTGTTAAAGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGAGAAAGGACTAGTTGCAAGATACTGTGCAGTGGTGAAGGGAAGGTGCAAGAGTTGAAGAAAAAGGGCCCTGCAACTGAAAACCATCAAATCCTGAACCAATTAAGGTCACCCCTTCAACTTCATCCTCAAGATGTAGATGGAGGAGTGCCAAGAGATGATGACTTCAACGTTATTGAGGAATCCATTGTCATCAAGAGAAAGTTGAAACACTCTCTGATGTCTTCCATTCATCACCAAAACGCTGTGATCCCTAAGGAAGCAAGTGTGAACAACAGTGACTACCACTCCTTCCCCAATTTGTCGCCAAATTGGGAAGCTAATAATGGTGCCAATGGACGCTCCACCTTTTGTGCGATAGCCAGCATGAATCTATCTGCAGGTAAGTTTTTCATTTCCATGAACAATACCTGAATTTCTTTCTTTCCTATTGAAATCGGTGATGACATCTAAGTGATGCTTAAAATCCTATGTGTTGATTTTTAGGGCTTCAAATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTCATCCTACCTAA