Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15809 LG4 11915323 11918617 hypothetical protein CCACVL1_08343
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 11915486 missense_variant p.Arg457His
C/T 11915496 missense_variant p.Glu454Lys
T/C 11915518 synonymous_variant p.Pro446Pro
T/G 11915548 missense_variant p.Gln436His
C/A 11915573 missense_variant p.Arg428Ile
T/C 11915585 missense_variant p.Asn424Ser
G/T 11915592 missense_variant p.Leu422Met
A/G 11915627 missense_variant p.Val410Ala
C/G 11915628 missense_variant p.Val410Leu
A/G 11915632 synonymous_variant p.Ile408Ile
T/C 11915639 missense_variant p.Lys406Arg
T/G 11915640 missense_variant&splice_region_variant p.Lys406Gln
G/A 11915646 splice_region_variant&intron_variant
A/G 11915657 intron_variant
C/G 11915667 intron_variant
T/A 11915668 intron_variant
C/T 11915677 intron_variant
T/C 11915692 intron_variant
G/A 11915715 intron_variant
C/A 11915733 missense_variant&splice_region_variant p.Val405Leu
A/T 11915830 stop_gained p.Cys372*
T/A 11915940 intron_variant
C/G 11915946 intron_variant
A/C 11915949 intron_variant
A/C 11915951 intron_variant
A/T 11915962 intron_variant
T/A 11915968 intron_variant
G/A 11916045 intron_variant
G/C 11916124 intron_variant
T/A 11916128 intron_variant
G/A 11916310 splice_region_variant&intron_variant
G/T 11916338 missense_variant p.Gln357Lys
A/G 11916504 synonymous_variant p.Cys301Cys
A/G 11916520 missense_variant p.Leu296Pro
C/T 11916538 missense_variant p.Cys290Tyr
T/G 11916540 missense_variant p.Lys289Asn
T/G 11916541 missense_variant p.Lys289Thr
C/T 11916549 stop_gained p.Trp286*
C/A 11916550 missense_variant p.Trp286Leu
C/A,T 11916553 missense_variant p.Arg285Met
G/A 11916562 missense_variant p.Thr282Ile
C/A 11916596 missense_variant p.Asp271Tyr
T/C 11916597 synonymous_variant p.Pro270Pro
G/A 11916614 missense_variant p.Pro265Ser
G/A 11916632 missense_variant p.Arg259Trp
A/G 11916740 intron_variant
A/G,* 11916744 intron_variant
A/G,* 11916746 intron_variant
A/G,* 11916748 intron_variant
A/G,* 11916750 intron_variant
A/G,* 11916752 intron_variant
A/G,* 11916754 intron_variant
A/G,* 11916756 intron_variant
A/G,* 11916758 intron_variant
T/C 11916844 intron_variant
G/T 11917021 intron_variant
G/T 11917158 missense_variant p.Pro249Gln
A/G 11917190 synonymous_variant p.His238His
G/A,T 11917356 splice_region_variant&intron_variant
A/T 11917458 intron_variant
T/C 11917476 intron_variant
G/A 11917509 intron_variant
A/T 11917669 intron_variant
G/A 11917995 splice_region_variant&intron_variant
G/A 11918010 intron_variant
A/C 11918074 intron_variant
A/T 11918077 intron_variant
G/C 11918080 intron_variant
T/A 11918245 missense_variant p.Glu63Val
A/T 11918308 intron_variant
G/A 11918325 intron_variant
G/A 11918371 missense_variant p.Ser50Phe
G/T 11918426 missense_variant p.Gln32Lys
T/A 11918457 missense_variant p.Glu21Asp
G/T 11918463 synonymous_variant p.Ser19Ser
G/C 11918464 missense_variant p.Ser19Cys
A/G 11918541 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15809.1
MERRNWKPQPQVKCTCIFFLGNSSLMGSPRGTTLLFFTLFFFWSFADALLSPKGVNFEVQALMSIKRSLEDPHGVLDNWDGDAVDPCSWTMVTCSSDNLVVGLGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNISGQIPSELGKLPKLQTLDLSNNFFRGEIPQSLGHLKSLQYLRLNNNTLVGECPESLANMTQLNFLDLSYNNLSGPVPRILAKSFSIVGNPIVCATGKEPNCHGMTLMPMSMNLNNTEHRHHEEVYLGNLKRFQFRELQISTHNFSSKNILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGQSSEKTDVFGFGILLLELITGQRALEFGKSANNKGAMLDWVKKIHVEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRVDTTKFKPQESSSSDRYSDLTDDSLLLVQAMELSGPR*


CDS Sequence:
>Vu_15809.1
ATGGAAAGAAGGAATTGGAAACCTCAACCTCAAGTGAAGTGTACTTGCATCTTCTTCCTTGGAAATTCCAGTTTAATGGGGTCGCCAAGAGGAACAACTCTTCTCTTTTTCACATTGTTCTTCTTTTGGAGCTTCGCAGATGCTTTGCTCTCTCCTAAGGGAGTGAACTTCGAAGTGCAAGCCTTAATGAGCATAAAACGCTCTCTAGAGGATCCACATGGTGTTCTAGACAATTGGGATGGGGATGCAGTCGATCCATGTAGCTGGACTATGGTCACATGTTCTTCAGATAACTTGGTCGTTGGACTGGGCACTCCAAGTCAAAGTCTATCTGGTACTCTATCTCCGAGCATAGGCAACTTAACCAACCTTCAGATTGTGCTGCTACAGAATAACAACATAAGTGGACAAATCCCATCAGAGTTGGGAAAACTTCCTAAGCTTCAGACCCTTGATCTCTCAAACAACTTCTTCAGAGGGGAGATTCCTCAATCTCTGGGACACCTGAAAAGCCTCCAATACCTGAGGCTCAATAACAACACTCTTGTTGGTGAATGCCCAGAGTCTCTGGCTAACATGACCCAACTCAATTTTCTTGACTTGTCATACAACAATCTTAGTGGCCCGGTGCCCAGAATTTTAGCCAAATCATTCAGCATTGTTGGAAACCCCATTGTTTGTGCAACGGGAAAAGAGCCAAACTGTCATGGGATGACATTGATGCCTATGTCCATGAACTTGAACAATACCGAACACCGGCATCATGAAGAAGTCTACCTCGGAAACTTGAAGAGGTTCCAATTCAGAGAACTCCAGATTTCTACTCACAACTTCAGCAGCAAAAACATACTAGGAAAAGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCTCTGATGGTACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATTGGAGGAGAGATTCAATTTCAGACAGAAGTTGAAATGATCAGCTTGGCAGTGCACCGAAACCTCCTCAGACTCTACGGATTTTGCATGACACCAACAGAAAGGCTTTTGGTTTATCCATACATGTCCAATGGCAGTGTTGCTTCTCGTCTCAAGGGACAGTCCTCTGAGAAGACTGATGTTTTTGGATTTGGCATTCTCCTCCTTGAATTGATCACAGGCCAGAGAGCTCTAGAGTTTGGAAAATCAGCCAACAACAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATGTGGAGAAAAAGCTTGAAATGCTGGTAGACAAGGATCTGAAGAACAACTATGACAGAATTGAACTTGAGGAAATGGTTCAAGTGGCCCTCTTGTGTACTCAGTATCTTCCAGGGCATAGGCCTAAAATGTCTGAAGTGGTTCGCATGCTCGAAGGTGATGGACTAGCAGAAAGATGGGAAGCTTCACAGAGAGTTGACACAACCAAGTTCAAACCCCAAGAGTCATCTTCATCAGATAGGTATTCTGATCTCACTGATGACTCTTTGTTGTTAGTCCAAGCCATGGAGCTCTCAGGACCCAGATGA


Promoter Sequence:
>Vu_15809::LG4:11918617-11920617(-)
ATAAATATAATAACTAATTATTATGACATAACAGATCCTTATAAAAGAGTATAAAAAAATATAATTTAAGTCAATCAAGATTAAAATATTCTGAATAATCTTAAACAAACTCAGCCTTCAAAATGTTTTATAACAATAAAAAATCATAATAAACAACATAATGTCATAAATTTGTACGTGAAATTGAATAATGCAATTCTTTTGAAAACGAAAAGGATCCTGTCCTTTTAAAAGTAATTTCCCAAAAGATCTAAAGTTAAACCCCAATAGTAAAACAATTGTACTCTTTGGTTAAAAGACACCTCTCTTGCATGTAAAATTTTGATTTTCTTGATAATTAACAATGAGTTTTGTCCTAATTCAATTCTACAGCACTTTGTTCATAAATTTAGCCCTCTTTTAATAACATTACACAATTAAATTATTAAGGTAAAAATTACTTTTAATTAGTATAAGTTACAAAATTAGAAAATAAAGAACAGATTTGTTCAACACATATATTTCAAGTCTTAACTCAGTTATATAAGATTAGGTTATACATTATAATTTATCTTTTAACCGATGTGGAACATTGAAATAATTCAAATTTTGGAGTATTCGCTTGGATATGAGGTTAATGTTTCCAACACTGAAGTTCAATAATATATGTTTCTGACATTTTAGTATGGAGAATGAATGTGACAGTTGAGTTGTTTGGTAAGAATAACAAGTAGCTAGAAAAATAAAAGCAAAATGTTATGTTGAGGTAGAAGGTAGGAGAAGAGTAGTTTCTAGGGTTAATGTTAGTTTAAGTTGGAAATGGTGAGATTATGATATAATAAGAAAAGAAAGAAAATTTGGAAAAGAAAGGTATGAGGTGGGTCACGGAAAGAGAGAGGGGAATGGCAGTGGCAGCTTTTGCTTTTCAAAGTTTTACTCTTTTTGAACAATTTTATGGGAATGACTGTCTGCTGTGGGAATAGACCAAAGAGACCAAAGTGTGATAGTTAGTTCATAGTGGTTTATGGAATCTATAAAGCACATCCCATACCATCACCCAACATTCATTTACAGCACAAAAGACATCACCTTATATTATTTTTTATATCACATTTTTCTGCTTCATCTATGCTATCTCACAAAATCTATCATCAATCTTCAGCCCCCAGAACTCCATTTTCCTCGAGATTCTCACATTCTCAATACCTTAACATTAAAAATTTTAACTTTAGGACTCTACTAAATGGCCAAACTCCACCCTTTTGGATTCTCCACGCAAGCATCAACCACTTCCCCCACAAGGGTTTTTTCTCAGCAAACATTATTACAAAAAACAGATTATATATAAGCAAAATGTTCAAACCCATGTAAAATATTTACATCACTTTTAATCTATAACTTCAAAACATAAACTTTATAAAAAAAAAATTTAGATTCATACTTAAATTATTCTCAACACTTACTAATTACCCCATTTTAAGGTTTTACTTGCTAATCCAACGAATTAAAACAAATAAATGAATACTCTGGTAATGTACTACTGCTGAATCAAACACGTAGGATTTTGGTTCTTTGCAGCCAAAAGGGAAAGAAAAGGGCTACGGTATTATTCTTTTGTTCTAAATGTGTCTGCTTAATATTCATTAATAAAATCTAATGATATCTCTCATGCACCAGTACTTTTTTTTTTCTTTTTTCTTTTTTCTGCTTTATCTACTACTTTGCTGATGCATATATAGTTTCATGAAAACTTCTTTATGCTTTAAGTGCATGTGTATGGTTAAGTAAGTCTCTCAAGTGTATTTCCGGTTCTCTCCCTGCCACATATGCTGCTGAAACTTTTACCTTGAATTGGTTTGTTCATCCTCGTTCTAAGATTAAGGCTGTTATATATATAATATTTTGCTTACAGCTTCCTGACTCAGTGACAGGCATGCTCCTTCTCTTTATGCTGTCTAAAAACATGTCTTTTTTCACCCCTTTGATCTGACACGAGATTTTTCGGTGGATGAGATTCTAGC


Gene Sequence:
>Vu_15809(-)
ATGGAAAGAAGGAAGTGAGTTTCTTTTTCTTATTTTGAACACCACAGTGATGAAAGCACATCCATTTCAGAACTGTTAAACGTTCCATATTTACATCTTTGTGGGTTGAAGTTGGAAACCTCAACCTCAAGTGAAGTGTACTTGCATCTTCTTCCTTGGAAATTCCAGTTTAATGGGGTCGCCAAGAGGAACAACTCTTCTCTTTTTCACATTGTTCTTCTTTTGGAGCTTCGCAGATGCTTTGCTCTCTCCTAAGGGAGTGAACTTCGAAGGTAAATTTGAAATTTTGCTCCTTCTTTCACCTTGTTCTCAGCTTCATAATATGCAGAGTTTTGAATTAGGTCTCTTTTTAATGCAGTGCAAGCCTTAATGAGCATAAAACGCTCTCTAGAGGATCCACATGGTGTTCTAGACAATTGGGATGGGGATGCAGTCGATCCATGTAGCTGGACTATGGTCACATGTTCTTCAGATAACTTGGTCGTTGGACTGTGAGTCTTCTTTCAATCTTATAGTTAAGCTGATGAAATACTGTTCCAATTTTGAACACTCATCAGGTGTACCAGTTTGTGCTGCAAATTGATTCAAGCTTTAGATGAAACTTGTGCTGTGTTGTTTGGTGCAGGGGCACTCCAAGTCAAAGTCTATCTGGTACTCTATCTCCGAGCATAGGCAACTTAACCAACCTTCAGATTGTGTAAGTGATTGCAAGGCTCTATGCAATTTAGTACTCTCAAAATGGCTTCTTATTGACTATGAGAGGTGTTTTGGACAACTTTTCAGGCTGCTACAGAATAACAACATAAGTGGACAAATCCCATCAGAGTTGGGAAAACTTCCTAAGCTTCAGACCCTTGATCTCTCAAACAACTTCTTCAGAGGGGAGATTCCTCAATCTCTGGGACACCTGAAAAGCCTCCAATACCTGTAAGCATACATGAGCTTGGGTTTGATATCTTGAGATGAATCCATTTTCAGTATCAATCTCTAATGTTTAATGCTAAAATTTTCCCAAAATTGTTTCAGGAGGCTCAATAACAACACTCTTGTTGGTGAATGCCCAGAGTCTCTGGCTAACATGACCCAACTCAATTTTCTGTAATACACACGAACTCTTCTGTTTTATACTTGTATCTTATGCATAATTTCAGTTTGGCATTCCTAAAGACCTTTCTTGTTTTGTGATTATCATTCAGTGACTTGTCATACAACAATCTTAGTGGCCCGGTGCCCAGAATTTTAGCCAAATCATTCAGGTAAGCCTATCTCTCTCTCTCTCTGTTATGTATGTGCATTTTGCTTGGAAGGAAAACAGAAAATTGGGTGCTAGCCTATAGATTAATCTCATTCCTTTTTATTGTTTCAGCATTGTTGGAAACCCCATTGTTTGTGCAACGGGAAAAGAGCCAAACTGTCATGGGATGACATTGATGCCTATGTCCATGAACTTGAACAATACCGAACGTAAGATGTCGTCACTGTCGGTCATGTTTTTTTAAAAATTGATTGTTCTTCCAAGCCTTGTGCCAGATTCCCATGTACTAGTGTACTCTGACACATTCTGCATGGTCATTGTTATGATGCTGATAACAATATCTTTGCTTCCCTAGATGCTTTACAATCAGGCAGACCAAAAACTCATAAAATGGCAATTGCCTTTGGCTTGAGTTTGGGATGTCTCTGCCTCATAGTTATCGGTTTTGGAGGCGTTATTTGGTGGAGACACAAGCACAATCAACAAGCATTCTTCGATGTTAAAGGTACTTGCCATTTACACACCTTGAATGAGATCAAAGTAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACATATAAGAATGTTCCAGTGCATCAAAAGCTAATTCAAGTATGGTATTGTTCTGACATTTACGACCGTTTTGTTAACTGTTTCAGACCGGCATCATGAAGAAGTCTACCTCGGAAACTTGAAGAGGTTCCAATTCAGAGAACTCCAGATTTCTACTCACAACTTCAGCAGCAAAAACATACTAGGAAAAGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCTCTGATGGTACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATTGGAGGAGAGATTCAATTTCAGACAGAAGTTGAAATGATCAGCTTGGCAGTGCACCGAAACCTCCTCAGACTCTACGGATTTTGCATGACACCAACAGAAAGGCTTTTGGTTTATCCATACATGTCCAATGGCAGTGTTGCTTCTCGTCTCAAGGGTAAGCTCAGTTCTGAAATTTCATACTCAAATTAGACCACCTCATTTAGTGTTACTTTCATACTTTCAAAGTATCACCCTTATGTTTGCAAATAGTATAACAAATTTCTTATATTATTTGTGAAAAAGAGAAATGAAGATAGAAACATTTTTATCAAGGAAGATTGTACCTAAGGATTCTAATACCAAATTCGTGGTTGTCAGGTAAACCAGTGCTGGACTGGGGCACTAGGAAGCACATTGCTTTGGGAGCAGCAAGAGGACTACTGTACCTTCATGAGCAATGTGATCCAAAGATCATTCACAGGGATGTGAAAGCTGCAAACATATTGCTTGATGACTACTGTGAAGCTGTGGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCAAGACTCACACGTCACAACTGCAGTGAGAGGCACAGTGGGGCATATTGCCCCAGAGTACCTTTCCACAGGACAGTCCTCTGAGAAGACTGATGTTTTTGGATTTGGCATTCTCCTCCTTGAATTGATCACAGGCCAGAGAGCTCTAGAGTTTGGAAAATCAGCCAACAACAAAGGAGCCATGCTTGATTGGGTGAGTTTGTTTCCCTTCATTCATCAGAACTCTTTCCTTTATCTCAAACCAAATGGTAAGTCTAAGTCCTTATATTGTTTGACATTCAGGTAAAGAAAATTCATGTGGAGAAAAAGCTTGAAATGCTGGTAGACAAGGATCTGAAGAACAACTATGACAGAATTGAACTTGAGGAAATGGTTCAAGTGGCCCTCTTGTGTACTCAGTATCTTCCAGGGCATAGGCCTAAAATGTCTGAAGTGGTTCGCATGCTCGAAGGTGATGGACTAGCAGAAAGATGGGAAGCTTCACAGAGAGTTGACACAACCAAGTTCAAACCCCAAGAGTCATCTTCATCAGATAGGTATTCTGATCTCACTGATGACTCTTTGTTGTTAGTCCAAGCCATGGAGCTCTCAGGACCCAGATGA