Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15753 LG4 11428165 11428894 Disease resistance protein RPP13
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 11428170 missense_variant p.Met2Ile
C/A 11428180 missense_variant p.His6Asn
C/T 11428461 stop_gained p.Gln39*
A/G 11428570 missense_variant p.Asn75Ser
A/C 11428573 missense_variant p.Asn76Thr
T/A 11428892 splice_region_variant&synonymous_variant p.Val182Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15753.1
MMLCLHHKILNSFKPRELFLSLLKCLLSASEYNDLFKKTTDGGEELSEEELKKRVAEVLKGKKYLVVLDDIWETQQWDKVKGAFPDHQTGSRILITSRDKEVAHYTGTTSPYYLPLLDKHESWELFSKKVFRGEECPSNLEPLGRSIVENCGGLPLAIVVLAGLVARKEKSEREWKRMKEVS*


CDS Sequence:
>Vu_15753.1
ATGATGCTGTGTTTGCACCATAAAATCCTGAATTCTTTTAAGCCTAGGGAGCTTTTCCTGAGCCTTCTGAAGTGTTTGCTGTCTGCGTCTGAATATAATGATTTGTTCAAGAAAACAACGGATGGAGGTGAAGAATTGAGTGAGGAAGAACTGAAGAAGAGGGTAGCAGAAGTGTTGAAGGGAAAGAAGTACCTGGTAGTGCTTGACGACATATGGGAAACCCAACAATGGGACAAGGTCAAAGGTGCTTTCCCAGATCACCAAACAGGTAGCAGAATACTAATAACAAGTCGTGACAAGGAGGTGGCACACTATACAGGAACAACTTCCCCCTACTACCTTCCCCTCCTCGATAAACACGAGAGTTGGGAACTCTTCTCGAAGAAAGTGTTTCGAGGTGAGGAGTGCCCTTCTAATCTAGAGCCTCTGGGTAGATCCATTGTTGAGAATTGTGGGGGTTTACCACTTGCCATAGTTGTTTTGGCAGGACTTGTTGCCAGGAAGGAGAAGTCCGAAAGAGAGTGGAAGAGGATGAAGGAAGTGAGTTAG


Promoter Sequence:
>Vu_15753::LG4:11426165-11428165(+)
GGGATGTCAACTGAACAAGAGATTGGATTGTGTGAAATATAAATTCTCCAACACTTTATAGCCTGAAAATGCAAGGAGTTTATGTTATTGTTATGCAGAGAGAACAATTTATAGCCTGAAAATGCAAGGAGTTTCTATCTTTACTAGTATCTAGCACACGATTATTGTGACAGCTTCTGTTAAAATAAAAAATGTTGGAAGCTACATAAGTATCTAAATTCTGAGCTAATTTCAGCTTAATGTAACTATTTTTTACTAAAAATATTATTCTAACTTTATTCTGGTGGACCTAGTCTCTTACATTTCTTGACTATCATATATAGTAATATAACTAATATAAAGGATAAATAAAATATAAAACAGACAATAATTAAAATTAAAAAATGAAAAAGAAAGAAAGAGACAATAATTAATAATGTAACTTTGTTAAAAGAAAAAAGAAAAACTAGAATATCCTTCTTTCTGGCGAAAAAAAAACATATTGTATTAAAAAAAGAGAAAAAACAAGAGTAACCTTAAAATAATCTCTTCTTTTAACCACTAAACCTATATAACAAAGTAGCCACCAAATTAAATTTCACGAACTTCTCTTCTCACAACACATTCTGTTTCACTTGCATGGGAATAATAGTTTTGGACAATAATATATAATCGCGGTTGGAGTTTGTGATATCTGCTTGTTCCTGCATCGACAGAGCGTGCTCAAGTTGCACCTCGATTTCACCCATTGTAGGTCGCTCATCTGCTTCATACTTCAAGCAATTCACCATGACATCTACAAACACTTGCCAACAATCTGGTGCAATCTTTCCTTTGATAATAGGATCAATTTTCTCCTCAACAGGATTCTCCAGAAGTTCTTTCTCAGAGAGGGTTATTAAATGATACGTCCTCCTGCACACCACTACCAGTAGAACCAAACCAAAGGAGAAAACATCCCATTTATCTGTGATGGTACCATCCATGACATACTCTGTGGCCATATAGATCCAAGAACCTATAAGAAAAATTATTAGCTTAGTTTAACCCACAAAAATAAATTCATTGCTCGTAAAACAAAACAAAAATTACCTATAGCATGCTCTACATTGATTTGTTTCTACTTTGACTTAAAGCGTGATCCCTGCACGCTAACACCAAAACCAGAGAGTTTTGGCTCCATGTGGTCATCCAAAAGGATGCTACTAGGACCGAGTGTACAGTGAAAGATGGAACGCTTGGCTCCAGTGTGAAGGTAGTGTAGTCCACTTGCTACTCCTATACATATCCGTAGCCTCTTCTTCCATGATAGTTCAGCATCTTGCAGGTGTTGATCTAGAGACCCATTGGACATGTACTCGTATACAAGAATCTTCTCATTTTCGTGGTTGCAGAATCCTGAGAGACACACATCTGGGGTGACGAAGCTGGCATAACAATTCTATTTCCTTGTTAAACGCTTCGCATCCTTGATCGTTAAATCGCTTTATTGCGACCGCTTAATCAGAAGCACCATTATGCTGTAGATAGCCTTTATATACTTCACTGAACATTCCATTTCCTATTACTCTGTTTAGATCGAAGTTATTGGTGGCTTTTCTTAGATCGGCGAGAGAAAATTGATGGCACAGCTCTTGTATCACTGTTAAAAACTGTCTCAGAGATGAGTCTGTATTCGATGTGGGCTTCCAACAGGACATACCCAAACAACTGAGAAACATAGTTCCAAAATGTGCATATTGTCACCGAGATGAACTCGTGTCACCAAAACATTTCAGAAACATTGTTCCACAGCTAAGTCTGTCCTCTTTTTTCTTCATTTATACGCGTTGCCATGTTTCGTGAGAAAGAGCATATCAAAATGTGTAGCACCTTTTCTTCCACGAAATTGCTTCCTTATCCCTGCATTGATTGGCCACACACATACTCATATCAAACGGTCAATTAGGACGACTTTTTATGGAGTATTAATTAGGTGGACATAGACAACTTCTTAGTAGGTTCCTCCACGCTTTAATTAA


Gene Sequence:
>Vu_15753(+)
ATGATGCTGTGTTTGCACCATAAAATCCTGAATTCTTTTAAGTAAGTTCTTTCTCAATCATTTATTATGGAACAGGGTGCACGACTTCAACCTGGTCAGGGGCACGACTTCTTCAATTGAAGTCCTTTTGGCCCCCGACTTCACTTTGGTCAAAATTTGCCCATTTTGGTAATAAAGAGGGTATATGGCTAGTTTGGTGCAAAAACCGTCCAATGATTATAGGCCTAGGGAGCTTTTCCTGAGCCTTCTGAAGTGTTTGCTGTCTGCGTCTGAATATAATGATTTGTTCAAGAAAACAACGGATGGAGGTGAAGAATTGAGTGAGGAAGAACTGAAGAAGAGGGTAGCAGAAGTGTTGAAGGGAAAGAAGTACCTGGTAGTGCTTGACGACATATGGGAAACCCAACAATGGGACAAGGTCAAAGGTGCTTTCCCAGATCACCAAACAGGTAGCAGAATACTAATAACAAGTCGTGACAAGGAGGTGGCACACTATACAGGAACAACTTCCCCCTACTACCTTCCCCTCCTCGATAAACACGAGAGTTGGGAACTCTTCTCGAAGAAAGTGTTTCGAGGTGAGGAGTGCCCTTCTAATCTAGAGCCTCTGGGTAGATCCATTGTTGAGAATTGTGGGGGTTTACCACTTGCCATAGTTGTTTTGGCAGGACTTGTTGCCAGGAAGGAGAAGTCCGAAAGAGAGTGGAAGAGGATGAAGGAAGTGAGTTAG