Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15752 LG4 11426759 11427844 hypothetical protein PHAVU_008G028500g
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 11426764 missense_variant p.Val252Asp
T/G 11426776 missense_variant p.Glu248Ala
C/G 11426855 missense_variant p.Asp222His
C/T 11426858 missense_variant p.Val221Ile
G/T 11426882 synonymous_variant p.Arg213Arg
C/T 11427029 missense_variant p.Glu164Lys
C/T 11427074 missense_variant p.Gly149Ser
G/A 11427114 synonymous_variant p.His135His
A/G 11427172 upstream_gene_variant
A/T 11427209 upstream_gene_variant
A/T 11427229 upstream_gene_variant
A/G 11427253 upstream_gene_variant
T/C 11427258 upstream_gene_variant
A/G 11427267 upstream_gene_variant
A/C 11427312 missense_variant p.Leu118Arg
C/T 11427347 stop_retained_variant p.Ter106Ter
T/C 11427361 missense_variant p.Thr102Ala
C/T 11427434 synonymous_variant p.Thr77Thr
G/C 11427435 missense_variant p.Thr77Arg
G/A 11427452 synonymous_variant p.Ile71Ile
G/T,C 11427477 missense_variant&splice_region_variant p.Ala63Gly
C/T 11427487 upstream_gene_variant
C/T 11427643 upstream_gene_variant
T/G 11427644 upstream_gene_variant
G/T 11427670 missense_variant p.Leu59Ile
T/C 11427788 synonymous_variant p.Thr19Thr
A/G 11427792 missense_variant p.Leu18Ser
A/C,G 11427804 missense_variant p.Leu14Arg
G/C 11427812 missense_variant p.Asp11Glu
A/G 11427818 synonymous_variant p.Asn9Asn
G/C 11427840 missense_variant p.Ser2Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15752.1
MSCWKPTSNTDSSLRQFLTVIQELCHQFSLADLRKATNNFDLNRVIGNGMFSEVYKGYLQHNDQHLQDAELSWKKRLRICIGVASGLHYLHTGAKRSIFHCTLGPSSILLDDHMEPKLSGSWIYMATEYVMDGTITDKWDVFSFGLVLLVVVCRRTYHLITLSEKELLENPVEEKIDPIIKGKIAPDCWQVFVDVMVNCLKYEADERPTMGEIEVQLEHALSMQEQADITNSNRDYILLSKTIIPMQVKQNVL*


CDS Sequence:
>Vu_15752.1
ATGTCCTGTTGGAAGCCCACATCGAATACAGACTCATCTCTGAGACAGTTTTTAACAGTGATACAAGAGCTGTGCCATCAATTTTCTCTCGCCGATCTAAGAAAAGCCACCAATAACTTCGATCTAAACAGAGTAATAGGAAATGGAATGTTCAGTGAAGTATATAAAGGCTATCTACAGCATAATGATCAACACCTGCAAGATGCTGAACTATCATGGAAGAAGAGGCTACGGATATGTATAGGAGTAGCAAGTGGACTACACTACCTTCACACTGGAGCCAAGCGTTCCATCTTTCACTGTACACTCGGTCCTAGTAGCATCCTTTTGGATGACCACATGGAGCCAAAACTCTCTGGTTCTTGGATCTATATGGCCACAGAGTATGTCATGGATGGTACCATCACAGATAAATGGGATGTTTTCTCCTTTGGTTTGGTTCTACTGGTAGTGGTGTGCAGGAGGACGTATCATTTAATAACCCTCTCTGAGAAAGAACTTCTGGAGAATCCTGTTGAGGAGAAAATTGATCCTATTATCAAAGGAAAGATTGCACCAGATTGTTGGCAAGTGTTTGTAGATGTCATGGTGAATTGCTTGAAGTATGAAGCAGATGAGCGACCTACAATGGGTGAAATCGAGGTGCAACTTGAGCACGCTCTGTCGATGCAGGAACAAGCAGATATCACAAACTCCAACCGCGATTATATATTATTGTCCAAAACTATTATTCCCATGCAAGTGAAACAGAATGTGTTGTGA


Promoter Sequence:
>Vu_15752::LG4:11427844-11429844(-)
TAACTTGTCAATGGACAAGTGTACATTCACATAATTGGTATATATTGAAGGATCAGAAGATGAGCCACCAATAGAGGTGTTTGTAGACGAGGAAGACGCCATAGGGAAGGAGAAACCCTAAAAATTCAAAGTGCTCCGATTGACGCAACGACCACAGATCCAGAAAGAGGGCGAGGAGGCGATCACGGCGGTGCTGATCGGCGGCGGAAAGCTCCAGCGACGCGCCGGCACGCGCGGCGGCAGCGGCGGCAGCGGATACTCTTGCGGCGGCGCGTGGAGGCGCGTGGGAGGTCCGTTCGCCGCGATCTTCGTACGACGGTGGTCGCCCGGCCGAGACGATTCCGATGGTGTGGTCGCCGGTCGATTCTGGAACTCCGGCGACGGCGGCGGCGGCGGCAGCGGCGACAGCGACGGCGGCAGCGACAGCGGCAGTGAGGGGTGCCGGAGACCGTGGAGTTGACTGGAACTATTCCTGTGCTCTAGATACCATATGAGAAATAGAGAAGATTGGGAGAGAATATCCCTTGTGTGTTGCATACACATAGGGTAATTTATTTATATTGTAAGATATGGGCCAATGCCCTTAATACATAATAGACTAAGCCCAAATAACAGAAACACACATCTTAACATCTAACAACGGAAAAGATCATGAATCCGACATGTCTTGACACCACCGTCACTTCTCCTGGTTGCCACTTGCACCATGCTGCGATCCACCAGCTCATCCAAGTAGTAGTCACCAAAATCCTCCAGCTCTGCTGTACTCGGGGCTCCTGTTTCTGGTTGAAGCCTTCAGCTGTTCATAGCTGGATCAATTGCCTTGCACTGATCTCGTAGTCTTCCGAATAGATTCCAAAATACAGAAAGCATGGCTTTAATCTTGGAGGCAAGCTGTCATAGCTAAGCTTCAATATATGCATCACTTGAGTCATGTCTTCTGTGAGATGCTAACTCACTTCCTTCATCCTCTTCCACTCTCTTTCGGACTTCTCCTTCCTGGCAACAAGTCCTGCCAAAACAACTATGGCAAGTGGTAAACCCCCACAATTCTCAACAATGGATCTACCCAGAGGCTCTAGATTAGAAGGGCACTCCTCACCTCGAAACACTTTCTTCGAGAAGAGTTCCCAACTCTCGTGTTTATCGAGGAGGGGAAGGTAGTAGGGGGAAGTTGTTCCTGTATAGTGTGCCACCTCCTTGTCACGACTTGTTATTAGTATTCTGCTACCTGTTTGGTGATCTGGGAAAGCACCTTTGACCTTGTCCCATTGTTGGGTTTCCCATATGTCGTCAAGCACTACCAGGTACTTCTTTCCCTTCAACACTTCTGCTACCCTCTTCTTCAGTTCTTCCTCACTCAATTCTTCACCTCCATCCGTTGTTTTCTTGAACAAATCATTATATTCAGACGCAGACAGCAAACACTTCAGAAGGCTCAGGAAAAGCTCCCTAGGCCTATAATCATTGGACGGTTTTTGCACCAAACTAGCCATATACCCTCTTTATTACCAAAATGGGCAAATTTTGACCAAAGTGAAGTCGGGGGCCAAAAGGACTTCAATTGAAGAAGTCGTGCCCCTGACCAGGTTGAAGTCGTGCACCCTGTTCCATAATAAATGATTGAGAAAGAACTTACTTAAAAGAATTCAGGATTTTATGGTGCAAACACAGCATCATTAATTAAAGCGTGGAGGAACCTACTAAGAAGTTGTCTATGTCCACCTAATTAATACTCCATAAAAAGTCGTCCTAATTGACCGTTTGATATGAGTATGTGTGTGGCCAATCAATGCAGGGATAAGGAAGCAATTTCGTGGAAGAAAAGGTGCTACACATTTTGATATGCTCTTTCTCACGAAACATGGCAACGCGTATAAATGAAGAAAAAAGAGGACAGACTTAGCTGTGGAACAATGTTTCTGAAATGTTTTGGTGACACGAGTTCATCTCGGTGACAATATGCACATTTTGGAACTATGTTTCTCAGTTGTTTGGGT


Gene Sequence:
>Vu_15752(-)
ATGTCCTGTTGGAAGCCCACATCGAATACAGACTCATCTCTGAGACAGTTTTTAACAGTGATACAAGAGCTGTGCCATCAATTTTCTCTCGCCGATCTAAGAAAAGCCACCAATAACTTCGATCTAAACAGAGTAATAGGAAATGGAATGTTCAGTGAAGTATATAAAGGCTATCTACAGCATAATGGTGCTTCTGATTAAGCGGTCGCAATAAAGCGATTTAACGATCAAGGATGCGAAGCGTTTAACAAGGAAATAGAATTGTTATGCCAGCTTCGTCACCCCAGATGTGTGTCTCTCAGGATTCTGCAACCACGAAAATGAGAAGATTCTTGTATACGAGTACATGTCCAATGGGTCTCTAGATCAACACCTGCAAGATGCTGAACTATCATGGAAGAAGAGGCTACGGATATGTATAGGAGTAGCAAGTGGACTACACTACCTTCACACTGGAGCCAAGCGTTCCATCTTTCACTGTACACTCGGTCCTAGTAGCATCCTTTTGGATGACCACATGGAGCCAAAACTCTCTGGTTTTGGTGTTAGCGTGCAGGGATCACGCTTTAAGTCAAAGTAGAAACAAATCAATGTAGAGCATGCTATAGGTAATTTTTGTTTTGTTTTACGAGCAATGAATTTATTTTTGTGGGTTAAACTAAGCTAATAATTTTTCTTATAGGTTCTTGGATCTATATGGCCACAGAGTATGTCATGGATGGTACCATCACAGATAAATGGGATGTTTTCTCCTTTGGTTTGGTTCTACTGGTAGTGGTGTGCAGGAGGACGTATCATTTAATAACCCTCTCTGAGAAAGAACTTCTGGAGAATCCTGTTGAGGAGAAAATTGATCCTATTATCAAAGGAAAGATTGCACCAGATTGTTGGCAAGTGTTTGTAGATGTCATGGTGAATTGCTTGAAGTATGAAGCAGATGAGCGACCTACAATGGGTGAAATCGAGGTGCAACTTGAGCACGCTCTGTCGATGCAGGAACAAGCAGATATCACAAACTCCAACCGCGATTATATATTATTGTCCAAAACTATTATTCCCATGCAAGTGAAACAGAATGTGTTGTGA