Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15749 LG4 11394707 11396282 PREDICTED: receptor-like protein kinase FERONIA
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 11394711 missense_variant&splice_region_variant p.Arg233Cys
T/C 11394720 intron_variant
C/T 11394731 intron_variant
G/A 11394746 intron_variant
T/C 11394750 intron_variant
C/T 11394752 intron_variant
G/A 11394756 intron_variant
G/A 11394777 intron_variant
C/T 11394778 intron_variant
A/G 11394789 intron_variant
A/G 11394796 intron_variant
C/T 11394799 intron_variant
T/G 11394819 intron_variant
T/G 11394825 intron_variant
G/A 11394836 intron_variant
T/C 11394841 intron_variant
G/A 11394842 intron_variant
C/T 11394879 intron_variant
T/A 11394901 intron_variant
G/A 11394975 synonymous_variant p.Thr221Thr
G/T 11395149 missense_variant p.Ser163Arg
G/T 11395178 missense_variant p.His154Asn
C/T 11395200 synonymous_variant p.Leu146Leu
A/C 11395214 missense_variant p.Tyr142Asp
T/A 11395237 missense_variant p.Asn134Ile
T/A 11395254 synonymous_variant p.Pro128Pro
G/A 11395263 synonymous_variant p.Ser125Ser
C/T 11395372 missense_variant p.Gly89Asp
A/T 11395466 splice_region_variant&intron_variant
C/G 11395470 splice_donor_variant&intron_variant
C/G 11395472 missense_variant&splice_region_variant p.Gly83Arg
C/T 11395643 missense_variant p.Ala26Thr
C/A 11395856 upstream_gene_variant
C/T 11395938 upstream_gene_variant
G/T 11395984 upstream_gene_variant
G/A 11396041 upstream_gene_variant
C/T 11396177 upstream_gene_variant
A/T 11396204 upstream_gene_variant
G/T 11396209 upstream_gene_variant
C/T 11396266 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15749.1
MLDEQLQDGKLSWKKRLEICIGVARGLHYIHTGAKRTIFHCILGPNTILLDDHMEPKLSGFGVSLQGSRFMSKQKQINVEHVMGTWGFMAALVNDGTITAKWDVFSFGLVLLDVVCRRTLAEKEFPENHLIEEKIDPILKGNIAPDCWQVFVDVMVNCLKYEPAERPTMGEVEVQLEHALSMQEQADITNSNCDYTLLSKTIIPLEVELVGLLTFLKGKIAPDCWQVMINCLTT*


CDS Sequence:
>Vu_15749.1
ATGCTTGACGAACAACTACAAGATGGTAAACTATCATGGAAGAAGAGGCTAGAAATTTGCATAGGAGTAGCACGTGGGCTACACTACATTCACACCGGAGCTAAACGTACCATCTTTCACTGCATCCTAGGTCCTAATACCATCCTTTTGGATGACCACATGGAGCCAAAACTCTCTGGTTTTGGTGTTAGCCTGCAGGGATCACGTTTTATGTCAAAGCAGAAGCAAATCAATGTAGAGCATGTTATGGGTACTTGGGGCTTCATGGCTGCGCTGGTCAACGATGGTACCATCACAGCTAAATGGGATGTTTTCTCATTTGGTTTGGTTCTACTCGATGTTGTGTGCAGGAGAACCCTGGCTGAAAAAGAATTTCCGGAGAACCACCTTATTGAGGAGAAAATTGATCCGATTCTCAAAGGAAATATTGCACCAGATTGTTGGCAAGTGTTTGTTGATGTCATGGTAAATTGCTTGAAGTATGAACCAGCTGAGCGACCTACAATGGGTGAAGTAGAGGTGCAACTTGAGCACGCTCTATCGATGCAGGAACAAGCAGATATCACAAACTCCAACTGTGATTATACCTTATTGTCCAAAACCATTATTCCACTTGAAGTGGAACTGGTGGGTCTATTGACGTTTCTCAAAGGAAAGATTGCACCAGATTGTTGGCAAGTCATGATAAATTGCTTGACTACGTGA


Promoter Sequence:
>Vu_15749::LG4:11396282-11398282(-)
TGTGAACACTAACTAAATAATATTGACCAACACTAATCGAATAATACTAATTGAGTATATTATACAAAAAAACTAAACAACTACCAAACAACTAAAACTAGAAACGGAATTGCAAATAAACCTTGATATTTAATTTTATCCTAACAGGCCCACTGTTAGGCTACGAGGTTGGCATGGTTGTTTTTTTTGTCATCCAAAGTTTAATATCATATGAAAATGGGCTGAATTTTTTATTTTTTACATGAAAACGAGCTAACGACAAACTAGCAGGCTTATTTCAAGCTGAAAGGGCTGAAACGAGTTGTTTTCTAATTGTTTCAAGGCTTAATACATCATTTGGTTCCTAGTTTTGGACTTTTTGTTCAAAGTCGTCCTACCTTTTAAAAAAATTAAGTAACATATCTCGTTAAAAACGATTCAAAATGGTCATTTTGACTTACGGCGTTAAAAACATAACGGTGCAATTGCCTCCGTGGCAAAAACTGAATGATGTGTACAATTTTTGATTGTGTGACAATGTGAGGTGAATTGAGTTGGCAAGGTATGTGGAAATGTTAAAAAGTTGAAGTTATTAAGTAAAAGAAAAGGGTTAGAATTTGTGCAAAATCATGTGTAAAATCAGAAGCCCCAATTGTAATTTTCAAAATTAGAATCTCAATTCACAATTCACAAAATCATGTGCAAAATCAAAAACCCTAATTGCCAATTTGCAATTCACAAAAAATCAGAAACTCCATCTCTCTCCCAACATTTCAGCAACCATCACCCCATCGTTGTCTTCTTGTTCACCTCAAACACCCACAACCAGAAAAAACTCATTCAAAGAGGAGGAAGAAAGTTGAACAATAATTGAGAAAAAGGGTCAGTGGTAACGTTGGTGGAGCTCATGGCCAACGACGTGCCTTGGAAAAGATGCAGCAATGTCGACGATCACGTCCGGCTCCGACGTTAACGGCGAGGCGAGAAAAGTGTAGTCGTGGGTGAAGGTGGTGTTGTAGTGACCTCACACAAAGAAGATGGAGGTGGGTGCGGTAGGTTTTCTTCTCTCTTTTGTTGTGGTTGAATTGAAAATCGAATGAAGAAAGAGAGATTATGAATGCTAAAACGGGTTGCTGGCAGGCGGGATTCTTCCAATTGCATCTTCAACGAACCATGAACCCAAATTGAAGATTACTTTCACCAAATTCTTGAACCCCAAATCGCGAATGAATTCTAACCTAATTGAAGATCACTTTTATTTAACCCTTAGTTAAACTTTTTCCACAGTCATTCAATTTTATTTTTAAAATTTACACCTTAATATATATCAAACGTGTCACGTATTACAAAATTGTACACATCATTCACTTTTGGCCACTAAGGCAATTGCACTGTTATGTTTTTAACTTTGTAAGTTAAAAGGACCATTTTGAAAAGTTTTTAACAAAACATGGAACCTTACTAAACATTTTTAAAAGGTAGGACAACTTTGAGCAAAAAGTCCAAAACTAAGAAGCAAATGATGTATTAAACCTTGTTTCAAATATTGGTTGAGTTGTATCAAACTTTGGTCGAGTTCTATCGGACCTTGACCTAGATTTCGACTGGATTATTGGATTGTGTTAATATGAAATGTTACAAGTTCCAATTTTTTTTAATTTAGTCGATTGACGGACTGACTCGAATGACCTGCAGGAATGGTATGCCGAACCAGGCTAACTAGGTTGGTTTAGGTTTCCGAGTTAAAAAGTTTATCCTGCCTTTTTTTTGCCGAATTGAGAGGCTAATCCGTCGAGCCCTTTTTACCATCACTAACTATATCACTAGGTGAATCTACCTAATTTTTCTACGGCCATATTGGGTTGGATGAATTTCTCTGTAAACATTTCTAGAAATAAAAGTCTTTGAACTTTTCCAACTGCTTATTCTCATTTTGACTATGCTTATTCTCATTTTGACTAAGTCAGACTTTCATATGCAGGTCCCAGTCTTTGAACTAGAGCAAACAATATCTGAAATGA


Gene Sequence:
>Vu_15749(-)
ATGCTTGGTGAGAAATGAACACAGCCTTGTTAAAAACTTTAGGGGATCTTATTTTGGCGAGATTCCAACCCAACCCTATTATTCTTCTCAAGCCAAACGAATGAGGAGTAGCATAGTTCAATGTCTATGGTAAGTGACAAGTGAAAACTACTTAAGCAAGCAGGTGTCACAAATTGGAACTATGTTTCTGAATTGTTTGGGCATGTGCTGTTCGAAGCCCACAACAAATACAAATTCATCTCGGAGACAGTTTCCATCGTTAATAGAAGAACTGTGCCATCAATTTTCTCTCATCGATCTCAGGAAAGCCACCGATAACTTTGATACAAACAGAGTAATAGGACGTGGATTATTTAGTGAAGTATATAAAGGCTGTTTACAGCATAATGGGGTTTCTGATTACACGGTCGCAATAAAGCGATTTAAGGATCAAGGATGGGAAGCGTTCAACACGGAAATAGAATTGTTATGTCAGCTTCATCACCCCAGATGTGTGTCTCTTATAGGATTCTGCAACCACGAAAATGAGAAGATTCTTGTATACGAGTACATGTCCAATGGATCTCTAGACGAACAACTACAAGATGGTAAACTATCATGGAAGAAGAGGCTAGAAATTTGCATAGGAGTAGCACGTGGGCTACACTACATTCACACCGGAGCTAAACGTACCATCTTTCACTGCATCCTAGGTCCTAATACCATCCTTTTGGATGACCACATGGAGCCAAAACTCTCTGGTTTTGGTGTTAGCCTGCAGGGATCACGTTTTATGTCAAAGCAGAAGCAAATCAATGTAGAGCATGTTATGGGTAATTTTTATTCTGTTGTATGAGCTTTCTCATTGCAATGAATTTTCGTGGGTCAAACTAAGTTAATACTCTTTCTCATAGGTACTTGGGGCTTCATGGCTGCGCTGGTCAACGATGGTACCATCACAGCTAAATGGGATGTTTTCTCATTTGGTTTGGTTCTACTCGATGTTGTGTGCAGGAGAACCCTGGCTGAAAAAGAATTTCCGGAGAACCACCTTATTGAGGAGAAAATTGATCCGATTCTCAAAGGAAATATTGCACCAGATTGTTGGCAAGTGTTTGTTGATGTCATGGTAAATTGCTTGAAGTATGAACCAGCTGAGCGACCTACAATGGGTGAAGTAGAGGTGCAACTTGAGCACGCTCTATCGATGCAGGAACAAGCAGATATCACAAACTCCAACTGTGATTATACCTTATTGTCCAAAACCATTATTCCACTTGAAGTGGAACTGGTGGGTCTATTGACGTTTCTCAAAGGAAAGATTGCACCAGATTGTTGGCAAGTCATGATAAATTGCTTGACGTATGAACCAGATGAGCGACCTATGGTGGGTCTATTGAGGAGGAAGTTCCTGTGGATTACAGGAACACCAATAACACCTGAGTCAACTATATAAGGGATCAACACCACTCTTTATCAAAAACATTAAGACAATGGGTTAATGGGTTTTTTATTTTTATATACTGCTCTACTTTCTCATTTCTATCCAATGTAGGACTTAGACTCACACTTGTATTCCAACAAAAACAGTACGTGA