Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15738 LG4 11301594 11302297 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 11301622 synonymous_variant p.Tyr156Tyr
A/G 11301626 missense_variant p.Ile155Thr
T/A 11301627 missense_variant p.Ile155Leu
A/G 11301631 synonymous_variant p.Cys153Cys
A/G 11301639 missense_variant p.Tyr151His
C/T 11301644 missense_variant p.Cys149Tyr
G/A 11301646 synonymous_variant p.Tyr148Tyr
A/T 11301774 stop_lost p.Ter106Argext*?
G/T 11301777 missense_variant p.Pro105Thr
A/G 11301828 missense_variant p.Ser88Pro
A/C 11301918 stop_lost p.Ter58Glyext*?
T/C 11302027 downstream_gene_variant
C/T 11302058 missense_variant p.Ser36Asn
G/T 11302258 missense_variant p.His14Asn
G/A 11302269 missense_variant p.Ala10Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15738.1
MNLFINTYKAGNCHGRKDFGLSVQGQRFMSKPKPIKVDSVVGTFGYLAKEHLVDLTITDKTDVYSFGMVLLEVVCGGSYVKRVTEREFLRPVEEKLHPNIEGKIAPECWQVFVEIIQGCVKYEADERPTMGEVEMQLEHALLLQEQADTANTNVEYTLLSKTIIN*


CDS Sequence:
>Vu_15738.1
ATGAATCTCTTTATCAACACATACAAAGCGGGAAACTGTCATGGAAGAAAAGATTTTGGCCTTAGCGTACAGGGACAGCGTTTTATGTCAAAGCCAAAGCCGATTAAAGTAGATTCTGTTGTTGGTACTTTTGGCTACCTGGCTAAGGAGCATCTCGTGGACCTTACCATCACTGATAAAACTGATGTTTACTCATTTGGTATGGTTCTATTAGAAGTTGTGTGTGGAGGGTCATATGTGAAAAGGGTAACAGAAAGAGAATTTCTGAGGCCTGTTGAAGAGAAACTTCATCCGAATATCGAAGGAAAGATTGCCCCTGAGTGTTGGCAAGTCTTTGTAGAAATCATTCAAGGATGCGTAAAATATGAAGCAGATGAGCGACCAACGATGGGTGAAGTAGAGATGCAACTTGAGCATGCTTTGTTGTTGCAGGAACAAGCAGATACTGCAAATACCAATGTTGAATATACCTTATTGTCCAAAACCATTATTAATTAG


Promoter Sequence:
>Vu_15738::LG4:11302297-11304297(-)
AAAAAAAATTATATATTTTCAAGAAAAAAGAAAATAAAAAATAAAAAAGAAACAATATTAAATAAATATAAAAGTTTATGTGTCTCAATAAATAAATATATATATATATATATATATATATATATATATATATATATATATATTTATTTTAAGAATATGAATAAAAACAACTTTGGGTCTACTTAAAATATAGTGATAAACACAATCCAAAACCTTAGGTAGGACATAAAAGTTGTTGGAAGATAATGAAAAGTAATGATAACTATTTTGACAAGTATACCAAATCGTTCCAAGTAATATAGAGTAAGTTCATAGTATCGTTCTCTCAAAGGACTTGTGTAACACATGACAATTCTTCTTTTATAACTCAATTAGACATCAAAATGCACAAAACAACACAAAAAACTCTTTTTGGTGTTTTATCAAATTGTTGGTGTGCAAGGAATTATATTTAAAAGAAATTTGGTTGGAATTGAGTTTCATGAATCATATAAATACAATATATCATTATTTCATTTAAACATTCACATCAAGGAATATTAGTCCTAATCCCTTAGCATCTTGTTCTAAATTTATATATCAAAATGTTAATCCCTTAGTCAATTTAACATACAATTTGCATTAAGTCCGACGTTAAGAATGACCAACTTATTGAGTCTATCCCTAAATCCCAAATCACTTAGGTGCTCTATCTATGTCCATGTTCAAAGTTACTTTCCAGTAATAAGAAACATTCAAATAACATTATATTATATTCATACAATGATAGTAAATTCAAGAGCATATGAACGAACAACGATATATTGAAGAGAAAAATTACATCACATTGAGTTCATTACATCCCATTCCAACGAAAGAAAAACTACTCCTAGTCATCTAAACATACACATTTGAAGCAATCCCTTGCAAAAAATAGTGTCTTGATGCCTTAAAGTAGTCTCCAGAAGTTCCTGAGATGTTTTCGTTTCTTTCTTTAGTCTGAACTTCTGTCAGGAGTTCTTTCTGTCTATTTCCCACTTTAAAAGCCAATTGAAAAAATAACTAATTTGTTAAGCGCATAACTCTTTATGCGCTAAGCAAATATTCAACTGCAGCATATCTTTAATTGTTCTTTATTCGCTCAGCGAGTTGTGCTGGTGCGCTGAGCGAATAAAACTCTATTTAGCTAAGCCATTTAATGCTGGCTTAGCGATAAACATCTGATAGTACTCCACTTTGATGTATAAATTCCTGTACAATTTACTACACAGTTTTCTACTTCTAATTACAACTTTTGAACGAGGAAAACACAATATTTCATAAATAAATACAAATTTTGAGTTAATTAATAAATCTGAAAACATATATTTTTCATATTTATCAACTCCCCAAACTTGAATTATTTGATGTCCTCATGAAATCATAATACAAACACCATAGACATCTGACATTTTAATAAAATGACCGTAAGAAAAAGTCACGTACATTTCCAAATATTTCAAACAAATATGATCCGCCAACTGTCAAGATATGTTGGACGGTTGACAAAGTTCTTTCTAACGAAACGCGTTGATTAAACAAACCAACGACAAGCTTAGCTACGAAGATCGAAGATGAGTAGAGGTGGACAGTGGTGGGTTAGAGGCAAGTGTTTGAAACTATGTTTCTCAAATGTCTGGGCTTCAGCTGTTCCAAGAACACATCTCAGAGAAATTATCCAACAATTATAGAAGAGTTGTGCCATCAAGTTTCTCTCTCCCATCTTACCAAATCAACCAACAACTTTGATCCAAAAAGGGTAGTTGGACGTGATTCATTTTGCAAAGTATATGAAGCTTCTCTCCAACATAGACACGGCTCTCCTTATACAGTCACAATAAAAAGATTTAATGTAAAAGACAATGACATCTTCAAGAATGAAATAGAGTTGCTCTGCCAGCTTCGTCACCCTAATATCGTCTCTCTTGTAGGATTCTGCAACCACAAGAAAGAGAAGATTATTGTGTACGAATACCTTTCCA


Gene Sequence:
>Vu_15738(-)
ATGAATCTCTTTATCAACACATACAAAGCGGGAAACTGTCATGGAAGAAAAGGTTGGAGATCTGCATAGGAGCAGCGCGTGGACTGCACTATCTTCACGCTGGAGCAAAGCGCACCATCATTCATCGTAATATCAATCCTAGCAACATTCTTTTGGATGGGAACATGGAGCCAAGGCTTGCAGATTTTGGCCTTAGCGTACAGGGACAGCGTTTTATGTCAAAGCCAAAGCCGATTAAAGTAGATTCTGTTGTTGGTAATGTTTCATTTCATGACGTTGCTTATTAATGAAATTTTACCAGTTAGACTAAGATGATACTTTCATTTATAGGTACTTTTGGCTACCTGGCTAAGGAGCATCTCGTGGACCTTACCATCACTGATAAAACTGATGTTTACTCATTTGGTATGGTTCTATTAGAAGTTGTGTGTGGAGGGTCATATGTGAAAAGGGTAACAGAAAGAGAATTTCTGAGGCCTGTTGAAGAGAAACTTCATCCGAATATCGAAGGAAAGATTGCCCCTGAGTGTTGGCAAGTCTTTGTAGAAATCATTCAAGGATGCGTAAAATATGAAGCAGATGAGCGACCAACGATGGGTGAAGTAGAGATGCAACTTGAGCATGCTTTGTTGTTGCAGGAACAAGCAGATACTGCAAATACCAATGTTGAATATACCTTATTGTCCAAAACCATTATTAATTAG