Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15639 LG4 10311131 10313745 PREDICTED: protein ODORANT1-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/C 10311514 intron_variant
A/T 10311589 intron_variant
C/A 10311749 intron_variant
T/A 10311801 intron_variant
A/C 10311802 intron_variant
A/T 10311809 intron_variant
T/A 10311811 intron_variant
T/A 10311978 intron_variant
T/A 10312011 intron_variant
A/T 10312755 intron_variant
C/T 10312774 intron_variant
T/C 10312814 intron_variant
G/A 10313056 synonymous_variant p.Lys157Lys
G/T 10313059 missense_variant p.Gln158His
G/T 10313070 missense_variant p.Trp162Leu
T/A 10313269 synonymous_variant p.Pro228Pro
T/C 10313301 missense_variant p.Leu239Pro
G/A 10313364 missense_variant p.Ser260Asn
A/G 10313403 missense_variant p.Glu273Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15639.1
MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLERCGKSCRLRWTNYLRPDIKRGKFSMQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLDKMGIDPVTHKPKNDAILSTEGHSKSASNLSHMAQWESARLEAEARLVRESKLRTSHSSSPSLQHSLIGTSASSSSSSAPLLPSSTRSLDHAWNNGSSTSTVATRVSESPTSTLSENNAPAVMTSVIEFVGSSERAMVKEEGEREWNKGFHESSTHLGEYKDGMENSMPFTSSLHELTVTMATTWGSGTTSAHEHGHVSEEGFTNLLLNSNSDHRSLSPEGGGESNNNCLGNGSDGHNNGNDNELYEDNKIYWNNILNLMNCSSPSTSPMF*


CDS Sequence:
>Vu_15639.1
ATGGGACGATCACCATGCTGTGACAAGGTGGGGCTAAAGAAAGGGCCATGGACTCCAGAGGAAGATCAGAAGCTCTTGGCATATATTGAAGAACATGGCCATGGAAGCTGGCGTGCTTTGCCAGCAAAAGCTGGACTTGAGAGGTGTGGCAAGAGCTGCAGATTGAGATGGACTAATTATCTAAGGCCTGATATTAAGAGGGGAAAGTTCAGTATGCAGGAAGAACAAACCATCATTCAACTCCACGCACTCTTAGGGAACAGGTGGTCGGCAATAGCAACACATTTGCCAAAGAGAACAGATAATGAGATAAAGAACTACTGGAACACGCATCTGAAGAAAAGGTTAGACAAAATGGGAATTGATCCGGTGACTCACAAGCCCAAGAACGATGCCATTCTCTCCACCGAGGGCCATTCCAAGAGTGCATCCAACCTAAGCCACATGGCTCAGTGGGAGAGTGCCAGACTCGAAGCAGAAGCAAGATTGGTCAGAGAATCAAAACTACGTACCTCACATTCATCATCACCCTCATTGCAGCATTCTCTAATTGGCACTTCTGCATCATCATCATCGTCTTCAGCTCCACTGTTACCCTCTTCAACACGTTCTCTTGATCACGCTTGGAACAATGGTAGTAGTACTAGTACGGTTGCAACGAGGGTCAGTGAGTCCCCCACTTCTACCTTATCTGAGAACAATGCACCGGCAGTTATGACTAGTGTGATTGAGTTTGTTGGTTCTTCTGAGAGAGCGATGGTGAAGGAAGAAGGAGAGCGAGAGTGGAACAAAGGTTTTCATGAAAGCTCCACCCATTTGGGAGAATACAAAGATGGCATGGAGAATTCCATGCCCTTCACGTCTAGTCTGCATGAGTTGACAGTGACCATGGCAACCACGTGGGGTTCCGGCACTACCAGTGCACATGAACATGGACATGTTTCTGAGGAGGGATTCACCAACCTTTTGCTGAATTCTAATTCCGATCACCGGAGTTTGTCGCCGGAGGGTGGTGGAGAGTCTAATAATAATTGTCTCGGTAATGGTAGCGATGGTCATAACAATGGTAACGATAACGAGTTATACGAAGATAACAAGATCTATTGGAACAACATTCTTAATTTGATGAACTGTTCTTCCCCTTCGACTTCACCCATGTTCTGA


Promoter Sequence:
>Vu_15639::LG4:10309131-10311131(+)
ACATCAAATTTTCTTTTACTTTCTTTTGATATTATTACTTTTACTATATTTTTCTTTCTCTTTTCTTTTAGAAATACAAAAAGTCACTTTTATTAGTAACTTTATATATATATGTTTCAAAAACCATATTGTATAAATAATTTTTTTTTTATTTAAGATACTTTTCACAAGCCATTTCAAAAACCATCTTTTATAAATGATTGTTTTTTATTTAGGATACTTTTCACAAATAAATTTTGGAATTGGATTTGACAATGAGATGTATATATCCTAATCAGTAATAGCTAATAATGAAAGTTAACGAGTTTAGAAGGAATTAAGTAATTTCTATTAAGGTGATAAGTTGTCAATTTTTTTTTCTAGAACAGTTATCTGCAATATGTACTTATATAAACTATGTTAATTAGAAAATAAAACGGAAGAAAACGAATGTCTGGATTAATAACGTGTAGAGTATTTGGATTAACCACAGATATTAAGAAAAAAAACTCGTAGTCTTAGATAAAAAATATATAAACGTCTGTAAAGTACACAATAAGATGAGAAAGTCACTACTGAAAAAAGAGTCATTTACTTACTATTTTGAAAATTCTACGTTAAAAGTGATATGAATTATTTTATATGAATTTACTCCTTCATTGGTAGTCTTTTATAAGAGTTTATTTACTTATTATAATGATCTTTTGTATGAATTTTTCCTATTTTGTTAATATTTGAATTGCAAAAAATAAGAAGTGTTGAGGTTTAGTGACAGACATGACTAGCTCACCATTTGGTCCTAAAATTTCTGATTAAAGTAATAGGAAAACTCAAAACCAGAAAGGAAGCATTGTTTGATCTCTGACTAGGTTGTAGTGTCCCTGGTGTCGCTAGCAGAAATGATCGCTTTCATCACTCCATTGATCTAGCATCTTTGGTACAGACAAGTCGACAATGTTTTAATCAACAACTTTAATTTGTTCGAAATTTCATTTAGAAAAAAAAGATTTGACGTTAACAAAACACTAGTCCATTAAAGACAAGCTCGAGTGCTAATCTGTTAACATTTGCTTAAATTAATTAGCTTTCGTTTCTGCATATCTTTTTTTTATATCAGTTTTGACAAGTAATCTTTTGGTTGGGATCCCAAAAATACTTACACAAGTGAAAGTTGTTATCATCTGTGATGATTCGAAGAGGCTAATTAACAGAGCTATAAGAACAATATGTTGATTGATTAGAGTGAAAACAGTATCAAACAAAAGCATGTGAGAACACTAACTGAAAGGTAGATAGAAAAAAAAAATCATTCTTAAAGTGACGAACATGGTAAGAGCTTACGAAAGCTGATATGAGGTACGTGAGATGTTTTTGGTGTTGGTCCCCATGAAAGGTTTTATCCGAGAAGGTTTCACACCAACGGAACAAACATTTCAGAAAATATAAACGATAAAGAAGTGTGTATTAATTTGATTATAGTTTATTCGAAAATATATATATATATACACACTATGGAAGTCATTGGTGAAGATTAAAAAGAAGGTCCACATACGCAAAGTCTCCACCCGTGTAAATAATTAAAACTCGTCCTTAGCAACGCCATAAATTCTGAGTAACGTGTCTCTAAAAGAAAAGTGGTGTGGCAATAATAACTCAGTAGCTCGAAGCTGTCAATAGGTTTAAAATTCTACCCCATACGCTATGAAAAGACAACGGAACCACTCAATTTTCATTACTCTCTCCATAAAGACTCACAAATGATGCATCCTACAGCATTCAATTGTAGGTGATGTGAAGGGTATTCTCGTCGTCATCGTAATATACATACATGCACACTCCTCCTCATCATCAACTTAGTTTCTTATCTCATATATTTATGCCGCTGACCTTTCTTCTTTCTTCATTATCTCTTTTACAACTCCAATTCCTTATCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTTTCACCCTTTTTCCCACAGTGTCTGCTTCTTCTCTATACAAAACCACTTCTTCCAAAAA


Gene Sequence:
>Vu_15639(+)
ATGGGACGATCACCATGCTGTGACAAGGTGGGGCTAAAGAAAGGGCCATGGACTCCAGAGGAAGATCAGAAGCTCTTGGCATATATTGAAGAACATGGCCATGGAAGCTGGCGTGCTTTGCCAGCAAAAGCTGGTAATCTTGTGTATATGTTGATGTGTGTGTATATGAATTAGAATAAAGCTTGTAGTTCACTGTACTGGGATGATATGTGTTCAGGACTTGAGAGGTGTGGCAAGAGCTGCAGATTGAGATGGACTAATTATCTAAGGCCTGATATTAAGAGGGGAAAGTTCAGTATGCAGGAAGAACAAACCATCATTCAACTCCACGCACTCTTAGGGAACAGGTTTTGTATATCTCGATAAAACTTATTTAAATTTCTGTGTCAGTGTTCCTAAAGGTTTTTTGGTGTAGTTGTTTTCTGCGTCAATGAGTTTGAGGAAATCAAGAAAAACAAATAGAGGAGAGAGATTCTTAATAGCAGTATCTCATAACCCCTAAGTTTTCTTGGTATCGCAGAATTTCTCTGTCTTCACATGTGACAAGTTTCAGGTGTTTGTGCTGGGTGTTTTACTGGGATTTTCATTGATTATTTTCACTATTTTAGTCGTATGATTCTTCTATATATGAGTACTGGATTTATGAACTCTCATGAGATTTATTTCTTTTTATTTTTTAGTGAGAAACAGTTATGTATATGTACCCACACCACACATATTTTGATTTTTGAAAATTACAGTAGAATTATGATACTACTGTTTGAATTCTTATACCCTCCATATATATATGCTATTAGACAATAACTCAGTACATGTTTCAACCATTTTTCAAGTTGGAGATATAATTTCTTTGCTTTTCCAACTCCTTTGTTGTTCAGAATGTCTTAAATGCGAGTGTATCTCAATCTCCATAACCACATATACTATCTCACATATGCAACACAGATAACTTTATTTGTGCCCTCTGTCATCCTCATAAATTTACTTCCTGACACCCAATATAGTTTATTCAATATGGTCCTTAAACGCAACAAAAGGATTTTCTTCCTCACCAAGCTAAATCAATGATCCATGAATGTCATTTCTAAATTGGACATCTCACACCTTTTCTAGGTGTCACATTACATATATAACTATATAATATTAACTAAACAAAAATTGCAATATTCGTTAGTGACAGAAAATATACAACTGATGAAATATTAAAATAATTTCAGTATAGTTTTTATTTTATAAATTTAATATTCACAGAAATTATCCATGAAAATCTGGTTCTATACTTTGCACCTATAATCCTCTGGAGCACACAATATTCTCAATCACACTATAGCCTCTTCATCTATTTCTAATTTCTATTCTCTCTTTATCATTTGGCTTGCTCTTTCTTATATGCCTCTCCTTTTACGTTATCCTTCTTGCTAGAGAGGTAGGAGGGTTCGAGAAATATAATCTGATAAGAGGAGAAATATAGCTAAAAATAATAAGTATTCATAGAATATTTGTGGTATATAGACAGAGAACAAAAGATAACAGTAGAACTGTCGAACATGTTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCATTGTTATTTATGTAAGTTCATGGATGATTCTAGGGCTTTCGTTTATTTGTATGACATGTTAATATGTTAGTATTGTGAACATGTCTCAGGTGGTCGGCAATAGCAACACATTTGCCAAAGAGAACAGATAATGAGATAAAGAACTACTGGAACACGCATCTGAAGAAAAGGTTAGACAAAATGGGAATTGATCCGGTGACTCACAAGCCCAAGAACGATGCCATTCTCTCCACCGAGGGCCATTCCAAGAGTGCATCCAACCTAAGCCACATGGCTCAGTGGGAGAGTGCCAGACTCGAAGCAGAAGCAAGATTGGTCAGAGAATCAAAACTACGTACCTCACATTCATCATCACCCTCATTGCAGCATTCTCTAATTGGCACTTCTGCATCATCATCATCGTCTTCAGCTCCACTGTTACCCTCTTCAACACGTTCTCTTGATCACGCTTGGAACAATGGTAGTAGTACTAGTACGGTTGCAACGAGGGTCAGTGAGTCCCCCACTTCTACCTTATCTGAGAACAATGCACCGGCAGTTATGACTAGTGTGATTGAGTTTGTTGGTTCTTCTGAGAGAGCGATGGTGAAGGAAGAAGGAGAGCGAGAGTGGAACAAAGGTTTTCATGAAAGCTCCACCCATTTGGGAGAATACAAAGATGGCATGGAGAATTCCATGCCCTTCACGTCTAGTCTGCATGAGTTGACAGTGACCATGGCAACCACGTGGGGTTCCGGCACTACCAGTGCACATGAACATGGACATGTTTCTGAGGAGGGATTCACCAACCTTTTGCTGAATTCTAATTCCGATCACCGGAGTTTGTCGCCGGAGGGTGGTGGAGAGTCTAATAATAATTGTCTCGGTAATGGTAGCGATGGTCATAACAATGGTAACGATAACGAGTTATACGAAGATAACAAGATCTATTGGAACAACATTCTTAATTTGATGAACTGTTCTTCCCCTTCGACTTCACCCATGTTCTGA