Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15605 LG4 9936903 9937560 PREDICTED: probable inactive receptor-like protein kinase At3g56050
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Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, protein phosphorylation
Cellular Component   located in   chloroplast, plasma membrane
Molecular Function   enables   protein kinase activity, protein kinase activity, ATP binding, ATP binding, protein kinase activity
SNP Position Effect Amino acid change
T/G 9936908 missense_variant p.Gln88His
A/T 9936967 missense_variant p.Leu69Met
T/C 9936970 missense_variant p.Thr68Ala
G/T 9936974 synonymous_variant p.Ile66Ile
G/A 9937046 upstream_gene_variant
C/T 9937070 upstream_gene_variant
T/A 9937146 stop_lost p.Ter48Leuext*?
C/T 9937302 upstream_gene_variant
A/G 9937305 upstream_gene_variant
C/T 9937365 upstream_gene_variant
G/A 9937425 upstream_gene_variant
C/T 9937450 upstream_gene_variant
C/T 9937498 upstream_gene_variant
C/T 9937539 missense_variant p.Ala8Thr
C/T 9937542 missense_variant p.Ala7Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15605.1
MTEAATAAVDEEWTISGNALLKFRQKIVSDPFGALSNWVDDDSSLDPCNWFGVECSDGRVVALNLKDLYLEGTLALELAKLIHINSRDSI*


CDS Sequence:
>Vu_15605.1
ATGACTGAGGCAGCGACGGCGGCGGTGGACGAGGAGTGGACAATCTCCGGTAATGCTCTTTTGAAGTTCAGGCAGAAAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGGTGGATGATGATTCATCTTTGGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTTGTGGCATTGAATTTGAAGGATCTCTACCTTGAAGGAACTCTGGCACTTGAGCTGGCGAAACTTATCCACATAAATTCTAGAGATTCAATATGA


Promoter Sequence:
>Vu_15605::LG4:9937560-9939560(-)
CATAAATATGAAAAAGGACAGTGAAATGAGCAAAATCTTTGAAATTTACCTCAATATAGGGAGGGATTAAATTTTAGTTTGGGTTGAAAGTATTCTTAATTCACCAAACAAATCTATACTAGTCTCATTCAGTTATTTGTTTTTAAGATTGTTTTCTTAGAATATAAGAAACGATTTTTTTAAAATAACAATTAACTCATGAATGTATGAGATATTAATCTTTTATTAAAACTAGAATTTTTTTCTATTCACAGTCTTTCAGACATTAATAATGTTTTGCAAGACTAGTTTTATTACTAGTCATTGGTTGCTTGCTTCTTTTATAGCTTATTGTTTACATTTCGTTATTCAATTTCTTTAAATGTTTGAATTTTTTAAGAAGTTTATTTTGATCATGTTGCTTTCATAATGCTGAAATTGGAAAATAAAAAAGAATGAAAAAACCTTGCTTATTTCTACATAAAAACACACCTAAAAAAATTATATATTCTTTAATAGTTATTTTATCAACTTATTTGTTATTTTTATTATATCAGTAAGGATGTTAAATTATATAAAATTTGAATGTAATATTTTGACTCTTGCACAAATTATTGATTAAGATGGCAACCAAGAATATAAGACATGATGTTTTTGTATATGTCAACTATAAAATAGGGTTAAGATAACATAAAAACAAGTACTGAAAAATACCTTATAAAAATAAAAGATCTTGACAGTCATATTATAATAGTAGGAATGGATGATTTAAATGAAGTTGTAGTAATTGAAGTTGTTTATGAAATTATAAAAATAGAAGGGTTGAATTTTTGAAGAGTAGTGCATGTGAATGAGGAATGTAATGTGTTAAAACGTTCAGGGTTTGATGTTGGAATTCATATATAGAAGTGTTTAAGACACTATTCATATTACAATTATCATGGGAAAATCTCATATCTATAATTTTGTGATTTACACATCGCTCAAGCGCGCCTTCATGGCCTAAGCGTAAGATGCCATCATTGAGTGTGAAGCTGTCTAAAGTCTAAGGTGCATGTCTTTCTAAGGTCTCTAAATATACCTAGGATACACCAAGTGTTTAGAGAGGTACCCTAAAGTCCCTGAGCGTCTACCCTAAGAGCAAACTATGAACACTGATTGCAGACAATTAGTGTAGAGCATAGGGAATTCTAAGAGGCAAGTTTGGTAACATTAAAAGGTGATATTTTGAAACACAAATTTTTTATATTTATTTGATATATTACTACAAAAATAAGTTTTAACGTCTGTTACTTCCAATCTTTGACGTCAATCCAAACTTCAACGTCTTAGTCGAAAATGTCAATTTGATATTGGTGTGACAAAATGATGTTAACCCCGAGTCAAATCAATGTCCATTAATGCAAGACCAAAGGAAACTGACATCCAACGACGTTCAAGAGAAAAGAGAATTCACCGCTGCTTAAACACTAGTAAAAAATAGGCTTTTTAACTCGCCTAATAGGCTTCGATCAAAGAAAAATCGAAACACATCTGAAAGCGGTGGCAATCTTGTAGTTTAGACGAACTTATATGCCCCGGTTTGTGAAGAACCGAAGCATGTAGTGCATATTACCTCGATTCAAAGCATAACCGATGCCTAATACTATGTAAAAAAAGTCACCTGACCCTCTGCAAAACTGCGTTTTGGCCTGACATGTGATCCAGTGCTTCGGTTCTAAACAGAATCGGTGTTGAAATAGGTTTATGCCTCGGTTAGTGCAGAACTAAGGCCTAAGAGTCTGTCAAATCAGTGCCTCAAACCCTACTTCTCATTTCTCCTACTGCTCAAACCCTACTGCTCACTTCTTCACCCAGGTTCCTTCCACAACTAAACCACATCATTGCCAACCCCAAATGTGCCACCGTTTCCGTAAAGAAATCCAATGATTCTGCAGTCGGCGTTGAAGGCGTGGCAGCATATAGGGAGAAGGCGGAGGAGGTCGTGGTGGTGGAACTTGGAGAGGCAGACCGCGTAGTCG


Gene Sequence:
>Vu_15605(-)
ATGACTGAGGCAGCGACGGCGGCGGTGGACGAGGAGTGGACAATCTCCGGTGAGATGCGGCGGCTGGAGGAGAATATCGGTGTGGTGGAGGCATATGCGGAGGGCGCGACGGAGGAGGAGGAGAAGCGGCGGAGGCGGCGACGATTGAGGTGGCGGAGGAGGAAGCGAACGGCGCGGGGCGGGGGCCTTGTGGCTGTTTTTTTCTTGTTTCAGAGTTTGGGTTTGTGTTGTTCTTTGAATGAAGAAGGTACTTCATTAGTGGTGGGATTTTTGGGTTTGAGGAATTTGGATGATGCTGAAACGTGGTTTCTGTGTGCAGGTAATGCTCTTTTGAAGTTCAGGCAGAAAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGGTGGATGATGATTCATCTTTGGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTTGTGGCATTGTAAGTGTTGATTTTTTTAACCCTTTTTCTCAGAAACTGCTTATTTGTAACCAATGCTGTTTTGAACAATAGTTTCCTCTGTTTTGAAATTTTACTTGAGTGATTTTGTGCTCAGGAATTTGAAGGATCTCTACCTTGAAGGAACTCTGGCACTTGAGCTGGCGAAACTTATCCACATAAATTCTAGAGATTCAATATGA