Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15599 LG4 9843900 9845495 hypothetical protein PHAVU_008G041800g
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, cell wall organization, response to light stimulus, response to auxin, response to auxin, growth, cell wall organization
Cellular Component   located in   nucleus
Molecular Function   enables   protein dimerization activity, protein binding, protein binding
SNP Position Effect Amino acid change
G/A 9844130 intron_variant
A/C 9844240 intron_variant
G/C 9844400 intron_variant
A/C 9844805 intron_variant
G/A 9844955 intron_variant
G/C 9845005 intron_variant
C/A 9845207 intron_variant
A/T 9845305 intron_variant
G/T 9845327 intron_variant
T/C 9845485 missense_variant p.Gln4Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15599.1
MSSQRSRQHSGSTRISDDQIIELVSKLRQLVPEIRSRRSDKVSASKVLQETCNYIRSLHREVSDLSERLSQLLTTIDADSAEAGIIRSLLNQ*


CDS Sequence:
>Vu_15599.1
ATGTCTAGCCAAAGATCCAGACAACATTCAGGGTCTACAAGGATCTCCGATGACCAAATCATCGAGCTTGTTTCCAAATTGCGCCAACTTGTTCCTGAGATTCGCAGTAGGCGATCTGACAAGGTTTCAGCGTCGAAGGTCCTACAAGAAACCTGCAACTACATCAGAAGCTTGCACAGAGAGGTGAGTGACTTGAGTGAGCGACTGTCTCAGTTGTTGACCACAATTGATGCTGATAGTGCTGAAGCGGGAATCATTAGGAGCCTACTTAATCAATAA


Promoter Sequence:
>Vu_15599::LG4:9845495-9847495(-)
TTTGTCAACTATTTCTTTTCCATGTTTCCTTCAAGATTTTCTTTTATAATTACAACATCATAACTCAGTTTTCTCTTTTCTTCTCTTTGGATACTCAATCAAGTCTTCTTTTATGTTTTGTTAGAAAACGACATGCTTGCTTTAATAAAAGAGTACCATTATTGTCATAAGAAAAACGTTATCCTTTTATTTATAATTTTTTACATGACATTTTTTATTATTAAGAACGAGGAAGAGAATAACACACTAATTGAACAGCCGACTTTGTCCTTTTCAGATGGGTGTAGGTTATTTGGTTCGATATTTTAATAAAATAGTAGAGATTTTTATTGATTTAGAGAAAAAAAAAATTGAACCAATTTTGAGAATTAAAGAAATATGAATAAAGAATAATAAATATAAGACGTGAGATGAGATAGTGTTTACAGATTATAGGAACACATCCAGATGTTCTCTAATTAACATACAGTTGTAGTTTGATATATAAAGCATGTATATTAAATGATTAAGTAATAAAATTCATATTACATCTCAGTTTAGGTTATGGAGGTAAAATTCCAATTATAGTTAATATTAATTAAAAACTTGAGGTATTCTTCTAAACTAAATTATTAATCTCTCAATTTACAAAAGATTTGTGCAAAAAAAACTATCTCTCAACAGATAATCTTTCAAACATAACTTACGAAGATTAAGCTTTTCAATATAGCATGGATCAAAGCAGGTTGAACTTGTTAGGTCAACCCACCCAATTAAACTACAACAAATGGTGAAATGTACTAAATAACTTAATCTACGAATACACCTAACCCGTCAATTTTTTTATATTTTTTCAGTTTCAGATTTGTTAAATATTATTTTGAACTCAAGAGGATTGTGGTTCCAATATTGAGTAAATCATATATGTGGTTCTTTGAATGAAATTGATTTACAATAGTCGATAATTAATGATATGATTTTTTAGACAGATTTTGATAAGTTAAATAGTCAACCCAACATTTTACCATTTGACAGACCCAAAACAAATCATTTCTGAATGGGGTAGATTATATTTGATAACATGTTTCTCCTCGACCAATTAAAAAAAAAAGTTAAAACTGGGTTTAATATGCGTTCTTACTCCTAACACAGTTATCGGTCAATTTCTTCCTTCTTCACTCCATTTGTAATAACTTAGGTGTTTTAACATTTTAATTGTTTCAAAACTTTGATGGATGTATAGAATTCGAAGACATAAGATTGCATTTTTCTTCCAACTATATCTTGGAGTAGTTAAGATAATAAAGTAATGACTTTAATTTTCACAGTAGAATATTAATACCACGTCTCAGTGATAAGCAATCTCATGAAAGATCTTAAGCATGAGCATCGTTACAAATCGGGGTAAGCTATAAAAAGATTAGATAAAAAATAGCACAGAATTAGTAAGCAGACAAAAAAAAGTTTTGGATGTAAGTAAGAAGAAATGTATAAAATGAGAGTAGAAAATAATGAGAGTTTGCGAATAGGAGAATTGATCTTGATCAGTGTTAATTTAATTAACAATTATCTAATCTAAATTTGAAACTACTAAGGATAGTCCAGTGCTTTCAATCAATGTTTTCTTGACATCCAACATAGCTGTCTACGTTATTGTACTCTCTCTATCTATCTGCTGTCCCCATGGTCCTCTCTTCCTTCATTATATCTCTCTCATCACTCTCTCCTCTCACTCAAAACCTCCCTCGTATCCAACACTCTTCTCTCCTTCCTCCTACTCCTATATATCCCCTTTCCCCTTCTTCCACTAACTCCATGTGTTTTATTTCCCACTTCCCAAACCAAAACCATTCATTCTTTGCTTTCCTTCTGCTTCCATATTACCAGGTAAAACTTATCATACACATACATAACCCCACACATACCTCTGCTTATATATAGCAGCAAAACTAGCCTAGCTTAGCTTGCACTTTCAACAATTACACACAAGTACACCAACCTCCACCTAGCAACCTAGTAAC


Gene Sequence:
>Vu_15599(-)
ATGTCTAGCCAAAGATCCAGACAACATTCAGGGTCTACAAGGATCTCCGATGACCAAATCATCGAGCTTGTTTCCAAATTGCGCCAACTTGTTCCTGAGATTCGCAGTAGGCGATCTGACAAGGTACAGAACTCAATCTCTCACCTTACTCACAAATGTAATGTAATGCGTGTCTAGAAATAAAAAAAAATAAAAAAATTACTTTTGAAGTGTGAAAGTTCTATATACAGTATCATTTAACCTCGCAGTAAAAATGATGAAAAACCACATCTAGAGAGAGAATTACAGGATCATTTAAAAGTATTCATACTAACACATAATTACTGGGAGTTTTTAATCTTTAAACTCTTTTGTTGAGAAAATTGAAGGGGTTCCTTGGCATGTGCATCTAACTTAGACTGAAGCTTCTCCTGGCTCATATAAAACCCAACTGTTTCAACCTCACGCTTCCTGATAGAGATATATATCTCTTATACAAACACAGAAACAGCTTGCTTCTTTGTTTCTGTATATGTGAAGTGATAGAGTAGGATTATGCTACCGATCATAGTGGCATGTCTCCTGCTGAACATGTCAATCGTATTATAATAAAGGAGGAGTCATGGATAGTCATAATTTGACCCGCATATTGAGGGCCAAGTTCCAAACAATTCCAAAATCTATACAGATCCCTCAGACTTTAAAGCCTTCTCATTGACTCTATAAAATTATATTTGCAAAGATAACGTATTTAAATATACATATGCATATACATATACATATACATATATATATATATATATATATATATATATATATATTATAATATTTGTTATTGCATACATTTCTTGGTCCATTTTACTGATTTTACTTGATGCGCTATAGTTACATGTGTATTTCTGAAACAGTGTTACTTTATAATTCATAAAAGATGCGAGCAGACAATATTTTTCAAAAGATATTACATCTATTTTTTAAAAGAGTTAATCGTGTTTGAACATGATATAATTACTGAATAATGTTTTTTAAATATTTAACTTATACTGTACATTTAACTTATACTGTACATTTAACATTTAAATCAAATGACAATCTAGCACAGTTACATGTTGAAAACGAAGAACAAGAAAGCTTACGCCAAAACAACTCTGGCAGTAACAGCAGTATATACAAGTAATGCAGAAGCCCAGAAGTAGAAAAAAACCATAAAAAACGAGGAGAGTAGTCAAGTGGTTAATTTTGACCAACTCATGCATGAAACGAATCTTTCCGTATGTAGTGATTGGATCATATAGTAATAACAATTTGGTCAGATAGCATGTGTTGGAGTCTAATCTGTTTGTTCCTGCTCATTCAACGGAAGCGGTTTAAATTTCATGCAAAGTACGGCATGTGTGAGTGTGTGTGAGATAAAGAAAGTGACTCGTAGGTAACCAAGATACTGACTTTTTTACAATGCAGGTTTCAGCGTCGAAGGTCCTACAAGAAACCTGCAACTACATCAGAAGCTTGCACAGAGAGGTGAGTGACTTGAGTGAGCGACTGTCTCAGTTGTTGACCACAATTGATGCTGATAGTGCTGAAGCGGGAATCATTAGGAGCCTACTTAATCAATAA