Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15595 LG4 9766752 9768555 PREDICTED: homeobox-leucine zipper protein HAT7
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity, sequence-specific DNA binding, DNA binding, DNA-binding transcription factor activity, RNA polymerase II-specific, sequence-specific DNA binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/A 9766785 synonymous_variant p.Pro256Pro
G/A 9766881 synonymous_variant p.Ser224Ser
G/C 9766940 missense_variant p.Leu205Val
C/A 9766943 stop_gained p.Glu204*
A/G 9767010 synonymous_variant p.Thr181Thr
G/A 9767011 missense_variant p.Thr181Ile
A/T 9767132 intron_variant
G/C 9767144 intron_variant
C/T 9767158 intron_variant
A/T 9767431 intron_variant
A/T 9767543 intron_variant
A/G 9767561 intron_variant
G/C 9767690 intron_variant
A/G 9767725 intron_variant
G/A 9767794 intron_variant
C/T 9767893 missense_variant p.Gly151Asp
T/A 9767983 missense_variant p.His121Leu
G/T 9768140 synonymous_variant p.Arg69Arg
T/A 9768147 stop_lost p.Ter66Cysext*?
C/T 9768184 missense_variant p.Arg54His
A/T 9768196 missense_variant p.Val50Asp
C/A 9768273 intron_variant
A/T 9768292 intron_variant
A/T 9768339 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15595.1
MAFPPSHSFTFHTHEEDHHHLPSTSVNAFPSLPPQHFQGGAPPLMLKRSMSFSGVENKCDEVNGDDELSDDGNFQCGEKKKRLNLEQVKALEKSFELGNKLEPERKVQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEALKKQFEAAKADNDVLKSQNQKLQAELQAVKSRGWCENGITSLKKETEGSWSNGSDNSSDIHLELSRAPIMNNATSCQAPFPTSITQILQYSSKPDFHDDDFCNVIHNAAQQNFWPWPGQQSHHFH*


CDS Sequence:
>Vu_15595.1
ATGGCCTTTCCACCTTCTCACAGCTTCACGTTTCACACGCACGAAGAAGATCACCACCACCTCCCTTCAACCTCTGTCAACGCCTTTCCCTCTTTGCCACCCCAACACTTTCAAGGGGGTGCACCGCCATTGATGTTGAAGCGGTCCATGTCGTTTTCAGGCGTTGAGAACAAGTGCGATGAGGTGAACGGAGATGATGAGTTATCCGACGATGGGAACTTTCAGTGTGGGGAGAAGAAAAAGAGGCTGAATTTGGAACAGGTGAAGGCTCTTGAGAAGAGTTTTGAGTTGGGGAACAAGCTTGAGCCAGAAAGGAAAGTGCAGTTAGCAAAGGCTTTGGGGTTGCAACCAAGACAAATTGCCATATGGTTTCAGAATAGAAGGGCCAGATGGAAAACCAAGCAATTGGAGAAGGAATACGAAGCACTCAAGAAGCAGTTTGAGGCAGCTAAGGCTGATAATGATGTTCTTAAGAGTCAGAATCAGAAATTACAGGCAGAGTTACAAGCAGTAAAAAGTAGGGGTTGGTGTGAAAATGGAATAACTAGCCTTAAGAAAGAAACTGAGGGTTCATGGAGCAATGGAAGTGATAACAGCTCAGACATTCATTTAGAACTCTCAAGAGCACCAATTATGAACAACGCTACATCTTGTCAAGCACCTTTTCCCACCAGCATCACTCAGATCCTTCAATATTCGTCAAAACCAGATTTCCATGATGATGACTTCTGCAACGTGATTCACAATGCTGCACAACAAAACTTTTGGCCCTGGCCTGGTCAACAGAGCCACCATTTCCATTGA


Promoter Sequence:
>Vu_15595::LG4:9768555-9770555(-)
TTATTCTCAAACCGAGTTCACACACAATTTCATTTATTTCTATGCATCCAAATTTCAATCAAGCTATACAATTATTCACGTCATTTCAAAATATTGATTTCAAACTTTTTCTCAATTCAACCATTTCATATGCATTTCTTAGAACTAATTTAGAAGAATTGAATGCTACTCCAATAACACTATGCACAATTGTCAAATTCATCTCAAAGTCTTATATTGCACATTAATCAAATTAATCTGAACTCTTTACAGCAGTGTCTATCCCATAATTTTGAATGTAATTTAATCCTTCAAAAATCAAGATAGAACATTCTTCCAAAATTTGAAATTTAAATTTTAGAACAAATTTTTTCTTCTTTTGTGTTGGGATTTCTTGAAAACTAAGAAAAATAAATGTTGGAGTGGATGATTAAAGATTCCAATACTCTTTAATCACCTCCAAAATAAAATCCTAACAACCAACATTTCAAAATAACCTCAAAATGATATAAAACTCATATGCCGACATGCATATAGATTATAAGAAGGATAAGAAGATATTGAAAAGGTTTTCCAGTTTCAGAATTGGTGTTATGTCTACACTTTTGCTGACTTGTGCTTAATAGGACCTAAATGATTTTCTAATTTATACTGATGGTGCGAAAGGGGAGGAAGAGTGTTTTCAAAAAGGCTTTTAGATAATAAAGAGAGTGATACTGATTTTTTTTGCAATAATGACAAAATTATACACATTTACATTTCACACATATTATAAAAATAAAATAGTTATAAAAAATATATATTTTTATGGAAAAAATATATAAAATGAATTTAAAGAATCAGTATGCGTATCATTTCTATTTTTCTTTTCACTTTTATGAAGACAACTTTCTTATACTATTTCTATTCCTTCTTGTTTATAATTAAATACTAAGATCCAAAATCAAACCTCACCCAAATAATTTAACTTTTCTGATATCTACATCCTCATTTTAACTCACATCTTATATTAAATAATAAATAAATACACAATTCAACTCAAAATTATTAAAATTCACATATACAAATTGTTTTGGGTGTTGGATATAGAGGTGAATAGCCTAATTACAATGTTCATTTTAAAGTTATCTTTGGATAATGTTATTCATTTATTGAGTTAGAAAGTTACTTGCAAAAGGTATTATAATACTAAAGTCAATAAAAATTTGATTACTTAAATGTTAATGATGTATTAAATATAATTATTTATCTCCTGTTTATATTTATAGATTTCGAAATAAATTTTTGATTAACAATCTAATTACCTTGTCATTGATGATAATTACATTTTATTTTTCTAGGCTGATTGTTTAATCATATTTCCTAACTATACGATCATAAAGATAAGAGTAATGGTAGAGTGACACATATTTACATTCATTTGACACATCTATCAAGGATAAAATAATTATAAAAAAGTTAATTTTTATAGTTTTTCGAAAAAGAAAAAAATAAAAAGTAAGAAAGAATAGTATTAAATAAATGTAAAAAAATTATGTGTTATTTTTCTAAAGGTAATAGATAGTTTGTATATAATATAACCGGACAACCATACACAGATAAAATAAAAACTTAATCCTCACTTATTTTTGGATTACACAAAAATAAATGGATTAAAAAATACTACTTGTTTATATTAATTAGTAGTGTCATAAATTTTCCACTAATATAAGAAAAGCCAATTCTGTACATTTCATAGAGTTTTTTTTCACATCCATTAGAATAAGCATACAATTTATATACTTATCTGAATTTCAAGGTGTTTATTAAGTTAGAGTTAATAGGAAGGGATCTAACTCGATCTTTCTCTCTTCTACACCGTTGTCTGTACTTGAAAATCTCGATCTCTGCACATCGTCATCTCCCTTTCTCAGTTTTGTGATCATGCACCTTCTTAGACTTCAACAGTAAGAGACAGATTCCAATTTGCATGAACGATACATCACTATCACAACACATCATCATCATCTTCTTCTTCTACC


Gene Sequence:
>Vu_15595(-)
ATGGCCTTTCCACCTTCTCACAGCTTCACGTTTCACACGCACGAAGAAGATCACCACCACCTCCCTTCAACCTCTGTCAACGCCTTTCCCTCTTTGCCACCCCAACACTTTCAAGGTTCACTCATCTCTTTCTGTCAAAACACAGATGTCTTGTAGCTATATATATTCTTTGTTCTTGAAAAATTATGAACTCATGTTTCACTTTAGAGTTAGATATCATTATATGCAAGTACATATTCTCTTGTTTGTCGAGTTCAATTTCTTTACCCTTTTACTCTTTTTGGACATGCTATCAGAAAATTGGGTTTTTTCTTAATGTTGCAGGGGGTGCACCGCCATTGATGTTGAAGCGGTCCATGTCGTTTTCAGGCGTTGAGAACAAGTGCGATGAGGTGAACGGAGATGATGAGTTATCCGACGATGGGAACTTTCAGTGTGGGGAGAAGAAAAAGAGGCTGAATTTGGAACAGGTGAAGGCTCTTGAGAAGAGTTTTGAGTTGGGGAACAAGCTTGAGCCAGAAAGGAAAGTGCAGTTAGCAAAGGCTTTGGGGTTGCAACCAAGACAAATTGCCATATGGTTTCAGAATAGAAGGGCCAGATGGAAAACCAAGCAATTGGAGAAGGAATACGAAGCACTCAAGAAGCAGTTTGAGGCAGCTAAGGCTGATAATGATGTTCTTAAGAGTCAGAATCAGAAATTACAGGCAGAGGTAATATTGGTTCTAGCTTTCTTCAAATTTGTGTTTGGATCAATCATTCAACTTCCCAATATAGTCTCCTTTTGGATCTAAGTAATAATAAAGTGTTTTGTGAAATGGATCAGGGGAACATGAACTTAATTACTGATCAGAATCTAGGGGTTAGTCTTACTAAACTGTTTTTCTTGATCTTGATTCAGATATCTGTAGTATGATTCCAATATTAAAATATTCGTTCTTGGTAGGATTCTTCTACTTTTGGAAAGAAAAGCATGAGTTTGCATCATTCCTCTCTTTAATTTTTCTTCCAAAAATTTAAATTCTGTTCCTCACTTCCTCTACACATGCATTCTCGTCATCGACTTTATATGTAACTCAATTTGTTATATTTTGAGAGTAGAGTTTTCTTACTACTCATGTTTTTTTTTGCTTTATAAGAAAAGGAAAACCTTTCCATATTTTGAGTTTTGGTGCGTTTCATTTACTTCTGAAACTCCATTCCGTATTGTATCACTATAATGACACAGCATTGGCCACTAACTTTTTAAAGTGACTGATTCCCACATTAACTATTTGCTTCTATAAGTTGGTCATTAATTTGGTGAAGAATCTGCGTCACTGTCAGGCCCCATACCTGTAACAAGTTGCAACGTGTTTCTTTTATGCAACGTGTGTTAATTTTTGCCATGATTAACAGACGCATTGCACAGGATCCAAGTAATGTTTTAAGCTTTTAAACACCAGAATATATTATATATGATACTTGATCATCATTTTTTTCTACTATATATTAATGTTTGCAGTTACAAGCAGTAAAAAGTAGGGGTTGGTGTGAAAATGGAATAACTAGCCTTAAGAAAGAAACTGAGGGTTCATGGAGCAATGGAAGTGATAACAGCTCAGACATTCATTTAGAACTCTCAAGAGCACCAATTATGAACAACGCTACATCTTGTCAAGCACCTTTTCCCACCAGCATCACTCAGATCCTTCAATATTCGTCAAAACCAGATTTCCATGATGATGACTTCTGCAACGTGATTCACAATGCTGCACAACAAAACTTTTGGCCCTGGCCTGGTCAACAGAGCCACCATTTCCATTGA