Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15521 LG4 8833234 8836950 PREDICTED: MDIS1-interacting receptor like kinase 2-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 8833238 5_prime_UTR_premature_start_codon_gain_variant
G/C 8833431 missense_variant p.Gly24Arg
T/A 8833442 synonymous_variant p.Ala27Ala
T/C 8833532 synonymous_variant p.Gly57Gly
G/A 8833555 missense_variant p.Gly65Glu
G/A 8833593 missense_variant p.Asp78Asn
G/T 8833784 missense_variant p.Met141Ile
G/A 8833796 synonymous_variant p.Gly145Gly
A/G 8833804 missense_variant p.His148Arg
C/T 8833805 synonymous_variant p.His148His
T/C 8833847 synonymous_variant p.Pro162Pro
A/T 8833948 missense_variant p.Gln196Leu
G/A 8834033 synonymous_variant p.Leu224Leu
T/G 8834180 synonymous_variant p.Leu273Leu
T/C 8834193 missense_variant p.Phe278Leu
T/A 8834195 missense_variant p.Phe278Leu
G/A 8834211 missense_variant p.Ala284Thr
T/C 8834315 synonymous_variant p.Ile318Ile
A/G 8834385 missense_variant p.Thr342Ala
C/T 8834386 missense_variant p.Thr342Ile
A/C 8834608 missense_variant p.Asn416Thr
G/A 8834637 missense_variant p.Val426Met
T/A 8834638 missense_variant p.Val426Glu
C/A 8834822 missense_variant p.Phe487Leu
G/A 8834862 missense_variant p.Glu501Lys
C/A 8834879 missense_variant p.Asn506Lys
T/C 8834897 synonymous_variant p.His512His
T/G 8834937 missense_variant p.Leu526Val
G/A 8835161 synonymous_variant p.Gln600Gln
G/A 8835177 missense_variant p.Asp606Asn
T/G 8835221 missense_variant p.Ile620Met
G/C 8835231 missense_variant p.Glu624Gln
C/A 8835343 missense_variant p.Pro661Gln
A/G 8835414 missense_variant p.Asn685Asp
T/A 8835475 missense_variant p.Leu705Gln
T/C 8835507 missense_variant p.Phe716Leu
T/A 8835514 missense_variant p.Leu718Gln
C/T 8835909 stop_gained p.Gln850*
C/T 8835914 synonymous_variant p.Phe851Phe
A/G 8835959 synonymous_variant p.Glu866Glu
A/G 8836095 missense_variant p.Lys912Glu
T/A 8836137 missense_variant p.Leu926Met
T/A 8836222 downstream_gene_variant
C/T 8836293 downstream_gene_variant
C/A 8836333 downstream_gene_variant
G/A 8836335 downstream_gene_variant
A/T 8836527 synonymous_variant p.Pro975Pro
T/C 8836588 synonymous_variant p.Leu996Leu
T/A 8836634 missense_variant p.Ile1011Asn
T/A 8836638 missense_variant p.Asp1012Glu
C/A 8836656 synonymous_variant p.Ile1018Ile
T/C 8836744 missense_variant p.Ser1048Pro
T/A 8836767 synonymous_variant p.Pro1055Pro
A/T 8836855 3_prime_UTR_variant
G/C 8836926 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15521.1
MECTFEREKSMLVLFLCVFLTLLGPQAAAEDSEANALLKWKHSFDNHSQSLLSTWRGNNPCTWKGIQCDKSKSVSTIDLSSYELKGTLHTLSFSILPNLLSLNIYHNSFHGTIPPQIGNLTKVNVLNFSSNSFHGSIPQEMWTLGSLHSLDLSLCHLSGELPNSMGNLSNLSFLDLGGNNFSSTIPPGIGKLHKLQYLGMGDCNLFGSIPQEIGMLTNLELIDLSRNSLSGTIPETIGNMSSLNQLYLSNNSLISGKIPSSMWSMSNLTLLFLDANNFSGSIPASIENLANLEQLGLDINQFSGSIPSTIGNLTKLTILYLGFNNLSGPIPPSIGNLINLDTLSLQSNKLSGPIPDTVGNLKKLTVLELSSNKLNGSIPLGLNDITNWQSLLLAENDFTGHLPPQICSAGSLQFFNIFGNRFTGPVPRSLKNCSSIARLRMEGNQLEGDIAQDFGVYPNLAYIDLSDNKFHGHISPNWGKCHNLYTFKISNNNISGVIPIELAGANKLGVLHLSSNHLSGKLPKELGNLKSLFQLKISNNHLSGNIPTEIGLLQNLEDLDLGDNELSGPIPIEVVKLHKLRNLNLSKNNIGGSIPSQFSQYLVSLDLSSNLLIGTIPTNIGELERLFMLNLSHNSLSGTIPSTFGRALSIVNISDNQLEGPIPNIPPFLDAPIESLKNNKGLCGNVRVLDLCPTNHSRKSNKVILVTFLSLGALVFVLCGVALSMYIFCRGKRKGKSHSNSQEAPRKAVFSVWSYDGKIMFENIIEATENFDDKYLIGAGSQGYVYKVVLPSGLVVAVKKLHSAIDEEMSEFSSKAFASEIKALTEIKHRNIIKLHGFCSHSQVSFLVYQFMEGGSLDQLLNKDTEATAFDWEKRVNVVKGLANALSYLHHDCSPPIVHRDISSKNVLLDLKYEAHVSDFGTAKFLKPSSRSWTEFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPRDLISQFVSPSMQPIVKDLLLVDVLDQRPPQPTKPIDGEVILIVRLALACLSQNPRSRPTMEQVSKAFGTGKSPSADLFPRISLGQLC*


CDS Sequence:
>Vu_15521.1
ATGGAATGCACGTTTGAAAGGGAAAAGTCCATGCTGGTTCTGTTTCTTTGTGTCTTTCTAACACTCTTGGGGCCTCAAGCTGCTGCTGAAGACAGTGAAGCAAATGCTTTGTTGAAGTGGAAACACAGCTTTGACAACCACAGCCAATCTCTGTTATCAACATGGAGAGGTAATAATCCATGCACATGGAAAGGAATTCAGTGTGACAAATCCAAGTCTGTATCCACCATAGATCTCTCTAGTTATGAACTCAAAGGTACACTCCACACTCTTAGCTTCTCCATTTTGCCTAACCTTCTCAGCCTCAATATCTACCATAACTCCTTTCATGGGACCATTCCCCCACAGATTGGTAACTTAACCAAAGTAAATGTTTTAAATTTTTCTTCAAATTCTTTCCACGGTTCCATTCCTCAAGAAATGTGGACACTGGGGAGTTTACACAGTCTTGATCTTTCCTTGTGTCACCTAAGTGGAGAGCTTCCTAATTCCATGGGAAACTTGTCCAATCTGTCATTTCTAGATTTAGGTGGCAACAATTTTTCTAGCACCATTCCTCCTGGGATTGGAAAGTTGCACAAGTTGCAGTATCTGGGTATGGGAGATTGTAACCTTTTTGGTTCCATTCCTCAAGAAATTGGAATGTTGACAAACCTTGAACTTATTGATTTGTCAAGAAACTCTCTTTCTGGTACCATCCCTGAAACAATAGGTAACATGAGCAGTTTAAATCAACTTTACCTTTCTAATAACTCCCTAATATCTGGGAAAATCCCATCCTCCATGTGGAGCATGTCTAACTTGACCTTGCTCTTCCTTGATGCCAATAATTTTTCTGGATCAATCCCAGCTTCCATAGAAAATCTGGCCAATTTAGAGCAACTTGGACTTGATATCAATCAATTTTCCGGATCCATTCCTTCCACCATTGGAAACTTGACAAAGCTCACCATTCTGTATTTAGGCTTTAATAATCTTTCTGGACCAATTCCTCCCTCTATAGGTAATTTGATCAATTTGGATACCCTTAGTCTCCAATCAAACAAACTCTCTGGACCAATTCCTGATACAGTTGGAAATTTGAAAAAGCTCACCGTTTTGGAATTGTCCAGTAACAAACTTAATGGCAGCATCCCACTAGGCTTGAATGACATTACCAACTGGCAATCCTTGTTACTAGCTGAGAATGATTTCACGGGCCATTTACCTCCTCAAATTTGCTCTGCTGGTTCGCTACAGTTCTTCAATATTTTTGGCAACCGTTTCACGGGTCCAGTGCCAAGAAGCTTAAAGAATTGCTCTAGTATTGCTAGACTCAGGATGGAAGGAAACCAATTGGAAGGAGATATAGCACAAGATTTTGGTGTATATCCAAATTTGGCGTATATTGATTTGAGTGACAATAAATTTCATGGTCACATTTCACCAAACTGGGGAAAGTGCCACAATCTTTATACCTTCAAGATATCCAACAATAATATTTCCGGGGTTATACCAATAGAACTTGCTGGGGCAAACAAGCTAGGTGTGCTTCATCTTTCTTCTAATCACTTGAGTGGAAAGCTTCCAAAGGAATTAGGGAATTTGAAATCGTTATTTCAACTCAAGATTAGTAATAACCATCTTTCTGGAAACATTCCAACAGAAATTGGATTACTGCAAAATCTTGAAGATTTGGATCTGGGAGATAACGAGTTGAGTGGCCCAATACCAATAGAAGTTGTGAAACTGCACAAGTTACGGAATTTGAATTTGAGCAAAAACAATATTGGTGGAAGCATTCCCTCTCAGTTTAGCCAGTATTTAGTATCTCTTGATCTTAGTTCCAATTTGTTGATTGGAACAATACCAACAAATATTGGAGAGTTGGAAAGGTTGTTCATGTTGAATCTCTCACACAATAGTCTTTCTGGCACCATTCCTTCCACTTTTGGCAGAGCATTGAGTATCGTCAACATATCGGACAATCAATTAGAAGGGCCAATTCCAAATATTCCACCTTTTCTTGATGCTCCAATTGAATCATTGAAAAACAATAAAGGCTTATGTGGTAATGTCAGGGTATTGGATCTTTGTCCAACCAATCATAGTCGAAAGAGCAACAAAGTGATCCTAGTGACATTCCTTAGTTTAGGAGCCCTAGTATTTGTTCTATGTGGGGTGGCACTTTCAATGTACATTTTTTGTCGTGGTAAAAGAAAGGGAAAAAGTCATTCTAATTCTCAAGAAGCGCCAAGGAAGGCAGTCTTTTCCGTATGGAGCTACGATGGAAAAATCATGTTTGAAAATATCATTGAAGCTACAGAGAATTTTGATGACAAATATCTCATTGGAGCAGGAAGTCAAGGATATGTTTACAAGGTGGTGTTACCTTCGGGTTTGGTTGTTGCTGTGAAGAAACTTCATTCAGCGATAGATGAGGAAATGTCAGAATTCAGTTCAAAGGCTTTTGCAAGTGAGATTAAAGCATTGACAGAAATCAAACATCGGAACATTATAAAGTTGCATGGATTTTGCTCACATTCACAGGTCTCATTCTTGGTCTATCAGTTCATGGAAGGGGGTAGCTTGGATCAGTTGCTGAACAAAGATACAGAAGCAACTGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGCTTGGCCAATGCTTTATCTTATTTGCATCACGATTGCTCACCTCCAATTGTTCATCGGGACATATCAAGTAAAAATGTTCTTTTGGATCTTAAGTACGAAGCTCATGTTTCTGACTTCGGGACTGCTAAGTTTTTGAAGCCTAGTTCAAGAAGTTGGACTGAATTCGCAGGCACCTTTGGGTATGCTGCTCCAGAGTTGGCCCAGACAATGGAAGTGAATGAGAAATGTGATGTTTACAGCTTTGGAGTACTTGCTTTGGAAATCATTATGGGAAAGCATCCAAGAGATCTCATTTCTCAGTTTGTGTCACCATCTATGCAACCAATTGTTAAGGATTTGCTATTGGTTGATGTTTTAGATCAACGGCCTCCTCAACCTACAAAACCAATTGATGGGGAGGTGATCTTAATCGTAAGGTTAGCACTTGCTTGCTTGAGTCAAAATCCACGTTCTCGCCCAACCATGGAACAAGTATCCAAGGCATTTGGAACAGGAAAATCACCTTCGGCTGACCTATTTCCTAGGATCAGTTTGGGACAACTCTGCTGA


Promoter Sequence:
>Vu_15521::LG4:8831234-8833234(+)
CTTCGTTATAACTTTTAGCCTTTATACAATATAGTGTTAATGACATAATAATGTAAAAAGATAGATTTAAATAAGTTTTTAATATATTAAGTATCTAACAATTTTTTTTTATATTTGTATCTAATCATAAATAATAAATTTATTTTTTTATCATAATAATGGACATATTTTCTATAAGAGGGTGATATATATTTTTTCACTACAAGTTGAATGTGAAGAATAACATGTGTTCTAATAAATTTAGAGTTGCTAACATTCAAATAAATCACAAAATCATGAAATGCAATTTACTTTAAAAGTATATTTATTGTTAATTTAAATATGTTTGATTTTAAAAATAAAGTATAAACAATAAATCTGAGAAAAATATGTGCATCAGATCGAAATACTAAAAGTGTTTGTTTTCATAAAGGTTAGGGAATTGATAGAGATGTGGCACATGCGCCTTCTTATGTCTCCTAATAAACTTTAAATAATCTTTTCATGGATTTCCTAAGAAACCCTTTAAGTCAAACTCATTGATAGAGACGTAGCATTTTAGCCTTGACGAAACCCACTTTAAGTTGGTACTTTTTTTGTTTCTATCCCATGAATTTTTATGTTGTAAAGTTACTTTTGACCCCAAGCATTCTTACTGATTGTTTTCAATGCATGTTCCTCGCGTATGTTTATTTATAATTTTTTTTTTTTGTATTTTAAAAGACATACTCTTCTGTGGATTAAAAAACATAAAAGACAAGACATTTTCAGAATGGATAAAACCTTTTGTCTCTCTTATATTAGAATATAAAATTATACAGCTGGTGGATGTTAGGTAACGATGAGTCAAAAGGATCCATTATTTTAGGAAGCAGTGGATTGAGAGAAGAGGGAGACGATGATACTCAATAGATTTAGAATCACAACAATGGTGCCTACAAATAATGAGGCCGTAAGATCCATTCAATTTAGCTTCTCATATACTTTTTGCTTCGGTTACTATATTGAAAGAAACCTCACAACACATCACCTTCAACTTGTTACTTCTACATATATTTTGAGAGCTGCCACTTACTATTTAGACTAATTTGGTATGGCTTAATAAGTTTATTACACTTGTTTTTTTCTTTCACAAATGTTATTTTGATTTTCCTCATTCGCACATTTTTTATTTATTTTATTTTGACCTTTACTATAACTAACACACACACACACACTAGAATACATCTTATTGATTTCGATAACTTGGGTTGTAACTAATTAATATTATGTGTTAATCTAAAATAAAATAAAAGTTCTATGTTAAGAAAAATTTATTCCACCTACTCTCTTCTCTTTCCATTTTAAATCATATTTATAAAACTAGTTTTAATTTTAAATATAATAATTTGATTTACAAATAAATATAAATTAGTATTATATATATATATATATATATATATATATATATATATAACAAATAAAATTTCTATCATTTAAAAAAAATTTATATATTATTATTCTAATACACAATGACTAAATTCAATTTATACTATAATTTTATAATCTAACTTGTTTTACGAATTTTTTATAATCTAACTTGTTTTACGAATTTTCATGGAAAAATGGCTTACTCCAATACTAAATCATAGAAGTAGACCGAGGAACTGATGGATTTCCATGAAAACAGATGCAGACAAACGGGGCAGGTATACTTGTTCTGAATTTATTATTTTCTCACATTTCCATTAATCAAGTATACTTGTTACGGTTACGCGTGAAAGACGAAGGAAAAGAAGTACAAAAGTAAACAAAGCAGAGAAATTCCTGTCATTGGATTTTTTATCTTTGTTTCTGTCTCTTTCTTTCTTCTTCTCATCTCTGTCTTCAACAACCAAACTACTAATAACTCCACCTTATCTTCACACGCATATTCAATCCATTGACGGTATCACGTTTTTCTTTTCCACGGTAATGCATAATAATTTAATTACCAGAAAATAGGCAATGCATATTTTATTCAAGGCCACGATGTGAATACA


Gene Sequence:
>Vu_15521(+)
AGATATATTTATAATAAAAAGTATACCATAATGTTTATTACATGTGAAACAACTCTGTGAGCTCCAATTTCTATGATCACCACCATATCATCTTATCCTTGATTCAAGGGCATTGTTACACTTACATCATGGAATGCACGTTTGAAAGGGAAAAGTCCATGCTGGTTCTGTTTCTTTGTGTCTTTCTAACACTCTTGGGGCCTCAAGCTGCTGCTGAAGACAGTGAAGCAAATGCTTTGTTGAAGTGGAAACACAGCTTTGACAACCACAGCCAATCTCTGTTATCAACATGGAGAGGTAATAATCCATGCACATGGAAAGGAATTCAGTGTGACAAATCCAAGTCTGTATCCACCATAGATCTCTCTAGTTATGAACTCAAAGGTACACTCCACACTCTTAGCTTCTCCATTTTGCCTAACCTTCTCAGCCTCAATATCTACCATAACTCCTTTCATGGGACCATTCCCCCACAGATTGGTAACTTAACCAAAGTAAATGTTTTAAATTTTTCTTCAAATTCTTTCCACGGTTCCATTCCTCAAGAAATGTGGACACTGGGGAGTTTACACAGTCTTGATCTTTCCTTGTGTCACCTAAGTGGAGAGCTTCCTAATTCCATGGGAAACTTGTCCAATCTGTCATTTCTAGATTTAGGTGGCAACAATTTTTCTAGCACCATTCCTCCTGGGATTGGAAAGTTGCACAAGTTGCAGTATCTGGGTATGGGAGATTGTAACCTTTTTGGTTCCATTCCTCAAGAAATTGGAATGTTGACAAACCTTGAACTTATTGATTTGTCAAGAAACTCTCTTTCTGGTACCATCCCTGAAACAATAGGTAACATGAGCAGTTTAAATCAACTTTACCTTTCTAATAACTCCCTAATATCTGGGAAAATCCCATCCTCCATGTGGAGCATGTCTAACTTGACCTTGCTCTTCCTTGATGCCAATAATTTTTCTGGATCAATCCCAGCTTCCATAGAAAATCTGGCCAATTTAGAGCAACTTGGACTTGATATCAATCAATTTTCCGGATCCATTCCTTCCACCATTGGAAACTTGACAAAGCTCACCATTCTGTATTTAGGCTTTAATAATCTTTCTGGACCAATTCCTCCCTCTATAGGTAATTTGATCAATTTGGATACCCTTAGTCTCCAATCAAACAAACTCTCTGGACCAATTCCTGATACAGTTGGAAATTTGAAAAAGCTCACCGTTTTGGAATTGTCCAGTAACAAACTTAATGGCAGCATCCCACTAGGCTTGAATGACATTACCAACTGGCAATCCTTGTTACTAGCTGAGAATGATTTCACGGGCCATTTACCTCCTCAAATTTGCTCTGCTGGTTCGCTACAGTTCTTCAATATTTTTGGCAACCGTTTCACGGGTCCAGTGCCAAGAAGCTTAAAGAATTGCTCTAGTATTGCTAGACTCAGGATGGAAGGAAACCAATTGGAAGGAGATATAGCACAAGATTTTGGTGTATATCCAAATTTGGCGTATATTGATTTGAGTGACAATAAATTTCATGGTCACATTTCACCAAACTGGGGAAAGTGCCACAATCTTTATACCTTCAAGATATCCAACAATAATATTTCCGGGGTTATACCAATAGAACTTGCTGGGGCAAACAAGCTAGGTGTGCTTCATCTTTCTTCTAATCACTTGAGTGGAAAGCTTCCAAAGGAATTAGGGAATTTGAAATCGTTATTTCAACTCAAGATTAGTAATAACCATCTTTCTGGAAACATTCCAACAGAAATTGGATTACTGCAAAATCTTGAAGATTTGGATCTGGGAGATAACGAGTTGAGTGGCCCAATACCAATAGAAGTTGTGAAACTGCACAAGTTACGGAATTTGAATTTGAGCAAAAACAATATTGGTGGAAGCATTCCCTCTCAGTTTAGCCAGTATTTAGTATCTCTTGATCTTAGTTCCAATTTGTTGATTGGAACAATACCAACAAATATTGGAGAGTTGGAAAGGTTGTTCATGTTGAATCTCTCACACAATAGTCTTTCTGGCACCATTCCTTCCACTTTTGGCAGAGCATTGAGTATCGTCAACATATCGGACAATCAATTAGAAGGGCCAATTCCAAATATTCCACCTTTTCTTGATGCTCCAATTGAATCATTGAAAAACAATAAAGGCTTATGTGGTAATGTCAGGGTATTGGATCTTTGTCCAACCAATCATAGTCGAAAGAGCAACAAAGTGATCCTAGTGACATTCCTTAGTTTAGGAGCCCTAGTATTTGTTCTATGTGGGGTGGCACTTTCAATGTACATTTTTTGTCGTGGTAAAAGAAAGGGAAAAAGTCATTCTAATTCTCAAGAAGCGCCAAGGAAGGCAGTCTTTTCCGTATGGAGCTACGATGGAAAAATCATGTTTGAAAATATCATTGAAGCTACAGAGAATTTTGATGACAAATATCTCATTGGAGCAGGAAGTCAAGGATATGTTTACAAGGTGGTGTTACCTTCGGGTTTGGTTGTTGCTGTGAAGAAACTTCATTCAGCGATAGATGAGGAAATGTCAGAATTCAGTTCAAAGGCTTTTGCAAGTGAGATTAAAGCATTGACAGAAATCAAACATCGGAACATTATAAAGTTGCATGGATTTTGCTCACATTCACAGGTCTCATTCTTGGTCTATCAGTTCATGGAAGGGGGTAGCTTGGATCAGTTGCTGAACAAAGATACAGAAGCAACTGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGCTTGGCCAATGCTTTATCTTATTTGCATCACGATTGCTCACCTCCAATTGTTCATCGGGACATATCAAGTAAAAATGTTCTTTTGGATCTTAAGTACGAAGCTCATGTTTCTGACTTCGGGACTGCTAAGTTTTTGAAGCCTAGTTCAAGAAGTTGGACTGAATTCGCAGGCACCTTTGGGTATGCTGCTCCAGGTTAGACCCTTTTCTCTCATATTTTCAACTTAAAACAGTCACATAATTTTTCATTTACATCACTCTATAACCTTGAAACTCCAGACAGAGATTGGCTCTCCCTTTGCAAATGGTGAAAAAAGTTATCAGCAAATACCGTGATCTATTTAGATAATGCTAGCTACTACACTTGATTGCATTTAACCCTGCTTTTTGCTTAGCATTACTCAAAAATATCTTTTTGTTTATTATCTATTTGCAGAGTTGGCCCAGACAATGGAAGTGAATGAGAAATGTGATGTTTACAGCTTTGGAGTACTTGCTTTGGAAATCATTATGGGAAAGCATCCAAGAGATCTCATTTCTCAGTTTGTGTCACCATCTATGCAACCAATTGTTAAGGATTTGCTATTGGTTGATGTTTTAGATCAACGGCCTCCTCAACCTACAAAACCAATTGATGGGGAGGTGATCTTAATCGTAAGGTTAGCACTTGCTTGCTTGAGTCAAAATCCACGTTCTCGCCCAACCATGGAACAAGTATCCAAGGCATTTGGAACAGGAAAATCACCTTCGGCTGACCTATTTCCTAGGATCAGTTTGGGACAACTCTGCTGAATCATCGGAATACTAAAGTATTTTGTTTCCTTTTTATTGTCGTGTACCCATCCTTTTTTCATTCCTACATGTTGTAAACTAGGTGCTTTGTTCATTGTATACACGAAGTACAATATTTGAAATGCTAATCCGTTCAAGTAAATTAATGTTTAACCC