Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15485 LG4 8505488 8507878 PREDICTED: transcription factor bHLH18-like isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 8505542 intron_variant
A/T 8505718 synonymous_variant p.Ser40Ser
C/T 8505719 missense_variant p.Pro41Ser
C/T 8505834 missense_variant p.Pro79Leu
G/T 8505857 missense_variant p.Ala87Ser
T/G 8505895 synonymous_variant p.Ala99Ala
A/C 8505907 synonymous_variant p.Ala103Ala
G/A 8506403 intron_variant
G/A 8506672 intron_variant
C/T 8506707 intron_variant
A/G 8507079 downstream_gene_variant
A/G 8507097 downstream_gene_variant
A/G 8507106 downstream_gene_variant
C/T 8507132 downstream_gene_variant
G/A 8507145 downstream_gene_variant
C/T 8507148 downstream_gene_variant
G/T 8507150 downstream_gene_variant
T/C 8507541 missense_variant p.Val245Ala
C/T 8507542 synonymous_variant p.Val245Val
A/C 8507557 synonymous_variant p.Ile250Ile
A/T 8507591 missense_variant p.Thr262Ser
C/T 8507592 missense_variant p.Thr262Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15485.1
MEDSLENWISDLLSQEMEEYDAFDEQQFLREILEEPQNLSPEGENNSPSNSSVSFDEAMGDTLQKSYSSNSIKSLKTSPPPPPSSSAAAYLLSFDTSTAEPIAKHKPSTLQGSCSTRGGAVVKDGSQVEPVMAQPRKRARRSRETQHHIIAERKRRQELTGSIIALSATIPGLKRMDKAYVLREAVNYTRQLQERVKELENKNSEKRVVHHSSTLVRKSEVCSKKSLSNSSESNKESLFEVEARVLDEEILIGIHCEKQKDTVCNILAFLEKLHLSPTSSSVLPFGTCTLIIHIIAQMDEECRMNMDELVKNLREYLLNVYDMQQVSL*


CDS Sequence:
>Vu_15485.1
ATGGAGGATTCATTGGAGAACTGGATTTCCGATCTGTTGTCACAGGAAATGGAAGAGTATGATGCATTTGATGAGCAACAGTTCCTGAGAGAGATCCTTGAGGAGCCACAGAATTTGTCACCTGAAGGAGAGAACAACAGTCCCAGCAACAGCAGCGTGTCATTTGATGAAGCAATGGGTGACACTCTGCAGAAAAGCTACAGTTCCAACTCCATCAAGTCCTTGAAAACATCACCACCACCACCACCATCATCATCAGCAGCAGCATACCTTCTCTCTTTTGATACTTCAACTGCTGAGCCAATCGCAAAACATAAGCCTTCTACACTGCAGGGATCTTGCAGTACAAGGGGTGGTGCTGTGGTGAAAGATGGATCTCAGGTTGAACCTGTCATGGCTCAGCCAAGAAAGAGGGCTAGAAGGTCTCGTGAGACACAGCATCACATCATTGCTGAGAGGAAAAGGAGACAGGAACTCACAGGGAGCATCATAGCACTTTCAGCCACCATTCCTGGACTCAAGAGGATGGACAAGGCTTACGTACTTCGTGAAGCAGTGAATTACACAAGACAACTTCAAGAGAGGGTGAAAGAATTGGAAAATAAAAACAGTGAGAAAAGAGTAGTACATCATTCATCAACATTGGTAAGAAAATCTGAAGTTTGCTCAAAGAAAAGCTTGAGCAATAGCAGTGAAAGCAACAAAGAATCACTGTTTGAGGTTGAAGCAAGAGTCCTAGATGAGGAAATACTGATTGGAATCCATTGTGAGAAGCAAAAGGACACAGTCTGCAACATACTAGCCTTTCTTGAAAAGCTGCATCTCTCTCCAACCAGTAGCAGTGTATTACCATTTGGCACTTGTACTCTTATAATCCACATCATTGCTCAGATGGATGAGGAATGCAGAATGAACATGGATGAGTTAGTGAAGAATCTGAGAGAATATCTGTTGAATGTGTATGACATGCAGCAAGTTAGTTTGTGA


Promoter Sequence:
>Vu_15485::LG4:8503488-8505488(+)
GATTATGAGAAAATAGTGGACAATATTTAAAAAGAAAATATATAATAAGTGAGGCGTCATTGATTTAAAAATGCAAAGAAAAATTATTGAAATATTTGACACGTGAAATGTTCATGTAATTTTCATTATTACTATAATCTTTTCTTTATCAAATACATGGGATGAAAATAAATAAAAATAAAAAATAACTTTTAAAGATATTTGACTGAAAGTAAATAAAAATAATAAAGTATCATTTACAGTTACTAGATTGCAAAAGACAAAAAGTAAAAAAAATGAGTTAAAATACATAAAAAATATAATAATTTTTTATATATAAAAAACTATATATTAACTGGCTTGTTTTGTTTTAGTGGTTCGGGTGAAGGTGAAGGATGAATTTATAGTTTGATTTGAGTTGTTATGGTGATATTTATGACGGTATGAACTGAGTTTCGTGATTATGTGGGAAAATACGAATTTGATAGTGATTTTCTTGTTTTTCGGATTTTTGTAGTTCTAGTAGCGAGGATGATGAAGATGGTAGTTGTGTTGGAAAAGTTGGATATACACATAGATCTCCACACTTGGTAAGATATTGTCCGTTTTGGGTCAAGCTTTCACGGATTTGTTTTTGGTACCACTCCAAAAAGTCTCTTAACAATGGAGGTATCTATGTGTACATAAACTCATGTCCAACTCTTTTTTTATCCGATATGAGACTTTGTTTGTACCTCAACAAGTTGAACGGTGTTAATGATGACTGGTTGTTGTGTTTCGATGGTTTGGGTGAAGGTGGATGATGAATTCATAGTTTTGATTTGGTTTGTTGTGGTGATTTTTATGGCGACACGAACTGAGTTTCGTGATTCTGGTGGAAAAAGACGAGTTTGATAGTGACTTCCTTATTTTTTTAGATTTTTGCAGTTCTAGTGACGAAGGTGATAAAAATGGTAATTGAACGATGTTAATGATGACTGATACAAGATAAAAATAGTGGCACAAAAGAGTTAAGGATGAAGGATTGTGACTGATGTAAGGTGAAAATCACTAATTTTAAAAAGCAATTAAATTCAATTAACTTTTTTCAATTTTTTTAATTTGAAAGAAAAACAAAATTTTACATCAAACTTAGCTATCTAACAACTTGCCACGTCATTTAAAAAACAAACATCAATGTACCATGTAAATTTTACAAAAATAAAAATCCAGTTAAAAAAAAATCTAAAGAACCTATCTATATTCTAAAAAAACCTGTCGAATGATAATAAACCTAAACATAACATATTACCGTGCAAAAATCATAATAAACTTAACATATTTTTTATTTTTTATCTTGTGGTTATACTTTAAATTTATTTATTTTTAATTTTTTTACTACCGAACAAGATACTATATAAAGGTAGTAAAATATTTGCATCATAGAAATCAGTCACCAATAAAACCAATAAATAATTTCTACTACTAAGAGGGATTTACAAGGATTTCATTCTATTTTATATCACGTGACATTACCTCTACATAAATCATCATACATAAATTTTGTTTCCATCATAATGTCTGATAAATTCACACCTTTATAAAATTGTATTTACATTTTAAATTGTTACAATTTAAAAATCAGTATAATTATTAAAATAGCACTTTTTTTTATTTTAAGACTAAATATGTTATAAAATATTAATTTTTTGACTTTAAGGATTTGTTTTACACCACCTGCCACAAAATGAAAACCATGTAAATAATATAATAAAATGCACAACTTGTTTAGTCAACTGGAGTATGCTTGAAACGAGTATAAATTTCTCAATACATAATAATCGCATGAAAGGTGTGAGAAAAATAAAAATAAAAAATAAAAAATAAAAAATAAAAAATCATCCTAGAATACAAGTAGTATATATAAAAGTTGAACCTTGTTACAGTCACAGCAATCTGATACAGAAGTTGCAATAGTGCTGCTATCAGCTTCACAGAAACACAGAGGTTCACACAAAAGGAGTTCTCAGATCCATAAAACA


Gene Sequence:
>Vu_15485(+)
ATGGAGGATTCATTGGAGAACTGGATTTCCGATCTGGTAAAGCCTTCTTCAACCACATTTAGTTTCAATTTCTGGGTTTTTGAGTATGCATTCTGCTATATATCCATGAACAAACCAGGGAAAAAGTTCAGAACTTTTTGTTCATAGTTGTCACAGGAAATGGAAGAGTATGATGCATTTGATGAGCAACAGTTCCTGAGAGAGATCCTTGAGGAGCCACAGAATTTGTCACCTGAAGGAGAGAACAACAGTCCCAGCAACAGCAGCGTGTCATTTGATGAAGCAATGGGTGACACTCTGCAGAAAAGCTACAGTTCCAACTCCATCAAGTCCTTGAAAACATCACCACCACCACCACCATCATCATCAGCAGCAGCATACCTTCTCTCTTTTGATACTTCAACTGCTGAGCCAATCGCAAAACATAAGCCTTCTACACTGCAGGGATCTTGCAGTACAAGGGGTGGTGCTGTGGTGAAAGATGGATCTCAGGTTGAACCTGTCATGGCTCAGCCAAGAAAGAGGGCTAGAAGGTCTCGTGAGACACAGCATCACATCATTGCTGAGAGGAAAAGGAGACAGGAACTCACAGGGAGCATCATAGCACTTTCAGCCACCATTCCTGGACTCAAGAGGGTCAGTTACTATATCATGAACATTCAGTATTATCTAAAAATTCAAACTGATTTTCTTTCATTGAAATGCATATTAAAAACATTTAATGGGTTTTTATTTGCATTTTTTAATAAATAATTCTGTTTTTTATTTGCCAACCAGTGTTGGTTAGAAATATCTTCTTTTGATCCATGGAAGACACTGATTTTTCTTATAAGAATTAACATTAGTTTCATCATGCATTTTCTTTTATATATATATATATATATATATATATATATATATATATATAGTGTGATTGACCTATTTTGTTTTGTTACTTTTCGAGTCAACTCATTTAATGAAAAGTCTAGTTGTTATATTAATAAGGAAATAGTAAGATAATTCTTATTTCTCGGACTTTGCGTTTTGTCTTCATCTTCCTCTGTATTCTTTTTGCAGGGATTAAATTAGCTTTATTGAAGTAATATAAATTGATAAAATATGTAATGAAATAGTTTGATATGTTCTTTTATATCTTCAACACATCTTGTGAATGGAAAAAATATTATTAACACGTTTTAGACTTAGAAAAGTACATAAACTCAGATGTGTTACTGTCTAACATTAAAACGGTAATCCTGTATTATCAATTAACTTTTGGATAATAAAACAAATGAAAAGGTTATTTTATTGTTCTTTCCAAATAATTGTTGTGCTTTTCGCTCATGCTTGATTAGGTATGGAATCCCTTTTCAACAGCTTGTCCCGACATTATTTTGTCAATGTCTTTTTAATTTTAATTTTGAAATTATTTATTTACAATTTTACACTAATTATTGGGCAGAATAGGGCAATTGGGGAGCACTTTCACTATTATTATCACTGCAAATGGGAAATATATTTTATTCAAAACCTGACCCGAGTAAAGAAAAAAATAAAGTTTTCATGGTACACTTGTACTACATATTTTAACAACTTTTTTAGAGCAGTTATTACTATTTTAATGATACGTATATTTAAAATAAATCAATTATAAAATATAATATACGTAGTTGTAAAAGAGCTGTGAAAAAAAATTATTAAAAAAATATTTTCCTCATAATTAAAGTCCCAAATGCATTATTGTTCTTTTTGAGATGCAAAGCACTTAAAAAAAATATAATATAATATAATATCAACAAAGAAGTTGAATATTTAAAAATTGTGTTAGTTTGTATTAACGGTAAGATTTGGTGTGTAACTTTACAGATGGACAAGGCTTACGTACTTCGTGAAGCAGTGAATTACACAAGACAACTTCAAGAGAGGGTGAAAGAATTGGAAAATAAAAACAGTGAGAAAAGAGTAGTACATCATTCATCAACATTGGTAAGAAAATCTGAAGTTTGCTCAAAGAAAAGCTTGAGCAATAGCAGTGAAAGCAACAAAGAATCACTGTTTGAGGTTGAAGCAAGAGTCCTAGATGAGGAAATACTGATTGGAATCCATTGTGAGAAGCAAAAGGACACAGTCTGCAACATACTAGCCTTTCTTGAAAAGCTGCATCTCTCTCCAACCAGTAGCAGTGTATTACCATTTGGCACTTGTACTCTTATAATCCACATCATTGCTCAGGTACATATATCAAACACCTTTCATGCACCCTTATGATTAATCATGCAAATGCATGATCTGTAATGTTGTGTTATTATTATGCAGATGGATGAGGAATGCAGAATGAACATGGATGAGTTAGTGAAGAATCTGAGAGAATATCTGTTGAATGTGTATGACATGCAGCAAGTTAGTTTGTGA