Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15400 LG4 7632055 7632703 PREDICTED: probable WRKY transcription factor 43
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   protein binding, protein binding, protein binding, sequence-specific DNA binding, protein binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/C 7632055 initiator_codon_variant p.Met1?
G/A 7632088 missense_variant p.Asp12Asn
G/A 7632238 missense_variant p.Val62Met
T/C 7632518 downstream_gene_variant
C/T 7632628 missense_variant p.Thr159Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15400.1
MMESHDPPPRNDPFLFNPLEPQEQGLCDFDSWGNLFSAQNSLLLLNGDAKETIQRASSSSLVAQNKVVCEEEKGSKEKRKGVRVKKTTRVPRFAFQTRSADDVLDDGYRWRKYGQKSVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL*


CDS Sequence:
>Vu_15400.1
ATGATGGAAAGCCATGATCCACCACCCCGAAACGACCCTTTTCTGTTCAACCCTTTGGAACCTCAAGAGCAAGGGCTATGCGACTTTGACTCATGGGGTAACCTTTTCTCTGCCCAGAACAGCTTGTTGTTGCTTAATGGTGATGCCAAGGAAACTATTCAACGTGCTTCTTCTTCCTCTTTAGTGGCTCAAAATAAGGTAGTTTGCGAGGAGGAAAAGGGTAGCAAGGAGAAAAGGAAAGGTGTGAGAGTGAAGAAAACAACACGAGTGCCGAGGTTTGCTTTTCAAACGAGAAGTGCAGATGATGTTTTGGATGATGGTTATCGCTGGAGGAAATATGGACAGAAATCTGTGAAGAACAGCACATATCCAAGAAGTTACTACCGGTGCACGCACCACACGTGCAATGTGAAGAAACAAGTGCAAAGGCTGTCAAAAGACACAAGCATTGTGGTGACAACGTACGAGGGAATTCACAACCATCCATGCGAGAAGCTGATGGAAACTCTAACCCCTCTGCTGAAGCAAATACAGTTTCTTGCTAGCTTGTAA


Promoter Sequence:
>Vu_15400::LG4:7630055-7632055(+)
TCACTCGCACAACGCACCCATCGCTATTCGAGTGCCTTGGCAGAGAGCACCTCGCCAAGGTGACTCACTATGCGAATCCATTCACACAGCGAGTCTGCATAATCTGCAGAACAAAATTCTGCAGAATTATGCAACTCAACCGCTCTTTACCAATTCTACTCAACTTTGCCAACTTCTAACACTCCTAATCCGTTGTATATACTTAATTAGACTTGACTAAATGATTGTAGACCTTCCTAACCTCAATCTAAAGTGTTTATGCATCAAATCCTACTCTAAAACCTCAATTTCATCAATTTAGAGACCCAAATCCTAATTGACCACTTTGAACCTAATTTTAACCATTTTGATGACTCAAACAAGTCACAAATGACCTGTCTAAACTACCCCAGCAGCCTCTAACAACACTTGACCTCTAATACTCAAATTCACTACCTCACTTCCTCTAAAATACACTAAACACATTCAAATCACTTCACATTTACTTAATCACCACAATACCAGATTTTACACCTGAATATATATTCAATTACAGCAGCACACAACATCCAATTCAGTTCATAATCATCATTCCACAGTCTCCACAATTTAACATTTTAAGAACATACGTTCATCAGCTAAATTTTCAACCAAACAACACAATAACACGGAATTATCCCATACAACACAAACTGATAACTGAAACACAACCTAGCTTCCCTTACCTCAGAGATAAACAACCACACTCACAGAAACGCTCCAACCGTACCTTGCACTGTAAGGAAACTCAACAAAAACCTACAACTCACCAATTGGTGATAGAGAACAACACTTAGAACTTAATTTGAGCTAGAAAAATGGAAGGAAGAACTGTTAACCACATGCAATACAGAAACGTTGCATGCTCACAGTTCAGTGAAGAATAAACAACAATGGAAACCACTTACCAGCTGAAGAACACGAAATTGATCGGTCCAAAACGAAGCTCTCAACGCCAGGATCTCCTAGGCACCTCCTGATTGTCGAACAGATAACTCAGCGGAGAGAAAAAGTAGAGAAAAGTCAGAGAACTCTGAGAAATAACGTTCTAGAGAGATGAAGTGTTCTTAGAATAATGAGAAGTGTTTATAAAATTCTAATTATATTATAAGATTATTTTAAAGTAAAATAATCTGTCTCATTATTTTAACACACCTATGTGCTCTATAACATTCTATTTGTCAAGTCTTTACAATGTTTCTATTTTTCTTATTAAGATTTTTTGTTTAACTAACCATTAACAATACAAGAAAATCATTAAATAATAATAAAATTTAGAGATAAAAATAATTAATGACTAATTTAATACCATTTTATAAATTAAAAATTATTAATATTTAAAATAGTTTATATTACCAATAAAAGGTTATAATTGATTTGTTAATTAAAATCTAGAATGGTTTCTAACATTAATTATTATGATTTTAACTACTTACTATATATTTGATTATAAATTAATTTAAAATTTCAAAGTAAAAATTAATTTAGACACCAATTTCTTGAAAGCGAATATTAAATATTAATTTAGACTTATTATTATATAGGTGGTGGGAATTCAGACATAGGTTGCACATAATTAGGTTTAAATTTAGACTTACTATTATTCAAACATAGTTAACAAAATCATAAAATCAGTTAATGGCATAAAAGTTACAACGTTTGACTTAATCAAATTGTACATTACATAAGTGCAAGTTTTATTGGTAGGTAAACAGTATATATTATCTGAAGTTTTGAACTAGTGTGGGAATGATTATATAATATCCTAAGAGAAGTGCAAAAGGATTATGAAAGAAGCTTGTTCTCTACTTGCACCCAATGCTATAAATTATCAACCAAATCCAACTACTTCTGTTCAACTGCCCTTTCAAGTTCATACCATTTGCACGAACTTTTCGTTATCTTCAATGCATGCAAATCCTCTTTATAAGTTTCAACGCCAAAACATTCTCATTTTCTCTTCAGTTCGTGGAATCAAGACA


Gene Sequence:
>Vu_15400(+)
ATGATGGAAAGCCATGATCCACCACCCCGAAACGACCCTTTTCTGTTCAACCCTTTGGAACCTCAAGAGCAAGGGCTATGCGACTTTGACTCATGGGGTAACCTTTTCTCTGCCCAGAACAGCTTGTTGTTGCTTAATGGTGATGCCAAGGAAACTATTCAACGTGCTTCTTCTTCCTCTTTAGTGGCTCAAAATAAGGTAGTTTGCGAGGAGGAAAAGGGTAGCAAGGAGAAAAGGAAAGGTGTGAGAGTGAAGAAAACAACACGAGTGCCGAGGTTTGCTTTTCAAACGAGAAGTGCAGATGATGTTTTGGATGATGGTTATCGCTGGAGGAAATATGGACAGAAATCTGTGAAGAACAGCACATATCCAAGGTAAATGTTTATGCGTGTGGGCTTTTGTTTACGTTGCATATATATGCATGCATGCATATGACTGTTCGTTATGATTTTGCATTAATGGATAATGAAGAAGTTACTACCGGTGCACGCACCACACGTGCAATGTGAAGAAACAAGTGCAAAGGCTGTCAAAAGACACAAGCATTGTGGTGACAACGTACGAGGGAATTCACAACCATCCATGCGAGAAGCTGATGGAAACTCTAACCCCTCTGCTGAAGCAAATACAGTTTCTTGCTAGCTTGTAA