Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15324 LG4 6163614 6164999 PREDICTED: transcription factor VOZ1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 6163836 upstream_gene_variant
C/A 6164119 synonymous_variant p.Thr107Thr
C/T 6164223 missense_variant p.Pro142Leu
C/T 6164231 missense_variant p.Leu145Phe
C/T 6164282 synonymous_variant p.Leu162Leu
T/C 6164329 synonymous_variant p.Asn177Asn
G/T 6164780 upstream_gene_variant
A/G 6164878 upstream_gene_variant
T/G 6164901 upstream_gene_variant
G/C 6164906 upstream_gene_variant
C/T 6164917 splice_region_variant&synonymous_variant p.Gly242Gly
C/T 6164945 missense_variant p.Arg252Cys
G/C 6164954 missense_variant p.Gly255Arg
G/A 6164979 missense_variant p.Arg263Gln
A/G 6164992 synonymous_variant p.Glu267Glu
C/T 6164995 synonymous_variant p.Cys268Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15324.1
MKAQIQILHQRKGALVKSIWKDQMKLQPGSLILRQYWKKHFDDNQPLGHNFEGSASTKFNNAFNNSDMEQLDFHPFSLNQDMNHNQVGHNSDLTGQVDLYQDLGHNTEIKHSESNQFSIEGFDCSQFFGAEDTVHHGQNIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCRNYCSSCHELLANNEGLSMTPILRPGGIGVKDGPLFVVVLTKTQGKELGIPSCEGAASTKSSWNARGAEDDEGVDVGVVEEVGVGEDGEVEENA*


CDS Sequence:
>Vu_15324.1
ATGAAAGCACAAATACAAATACTCCATCAAAGAAAAGGAGCTTTAGTGAAATCAATTTGGAAGGACCAGATGAAACTTCAACCAGGTTCTCTAATCCTGCGGCAGTATTGGAAGAAACATTTTGATGATAACCAACCTCTAGGGCATAATTTCGAAGGCTCTGCTTCAACTAAGTTCAACAATGCTTTTAATAACTCAGATATGGAACAGTTGGATTTTCATCCATTCAGTTTAAATCAAGATATGAATCACAACCAAGTTGGTCACAACTCTGATTTGACTGGTCAAGTGGATTTATATCAGGACCTCGGGCATAACACCGAAATTAAACACTCAGAATCAAATCAATTTAGCATAGAAGGTTTTGATTGTAGCCAATTCTTTGGAGCTGAGGATACTGTGCATCATGGACAAAACATTATACCTAACATTCTTCCAAATATCTGCCCTCCACCATCTGCTTTCTTAGCTCCAAAATGTGCCCTGTGGGACTGTTTCAGACCCGCTCAAGGGGTAGAATGGTGCAGGAATTACTGTAGCAGTTGTCATGAGTTGTTGGCAAATAATGAAGGTCTTAGCATGACTCCAATTTTACGACCAGGGGGCATTGGTGTAAAAGATGGCCCTTTGTTTGTTGTTGTTCTTACGAAGACCCAGGGAAAGGAACTGGGCATCCCCAGTTGTGAAGGCGCCGCATCAACTAAATCTTCTTGGAATGCTCGAGGAGCGGAAGACGATGAAGGTGTCGACGTTGGCGTGGTGGAGGAGGTTGGTGTTGGTGAAGATGGCGAGGTAGAAGAGAATGCATAA


Promoter Sequence:
>Vu_15324::LG4:6161614-6163614(+)
GGTGGCAGCTGATAAGGGTATTCCAGTTACTACATCACCCGGGTGCACGAACGTCGTAGCTACACAGATTTCATATAGTCCGGACAGTCAGTCTAGTATTAGGCCTTGCTTGAAATGTATGATGAAATATATCTTATGTGTTCGAATGTGAGAAATGTATGTTTATACTTGAATTAAATTATATAAGCTTACCTTGTGTTTTCCTGTCCTGTCTTGTTTGGTACGTCCGTCTTTGTCATTGCAATGATCATCCGTGTGGATGTGAGCAGAAGGAGACGAGCTGCTGGAAGAGGCACTAGAAGAAGAAAATTTGGTCGAGGTAGAAGTGAAGACTGAAGAGTAGGACGTTCGGTCATTAGTGTAGTCTATTGTAAGGTGGTCGTTCGATCACCTTCCCTTTTATTATGTATGACCATTCTGTATTTGATTTTGTAAACCGTTCGGTCATGTTTGCTTATCTTATATAGTTTATGATCACTCTTTTGTAAGGTCATTCGGCCGTAAACGTACGTTCCGTTTTTAGTGTAAAGACTGATCTGAATTATTAATTAATGTGATTATTCTATTATATAGTTTTGGACTGTATTTTTGGGATGTTACAAGTTTCTTGTTGCAGAGATACTTTTTAATTTTCAGAGGATTTCTGTAGGGATTTTAATCACTTCTGCTATTAACCTTTTATATCCTGCCCCACGACGATTTTGCATGTTGGGAAAGTAGAAGCAGTGTGTTTGGAATTAGATGGGTTAAAACAATATATAAGCAGTGCTCCTCAATGACGGCAACTTCCTAGTACAAACTTCAAGATAATTCTTAGTCGCTCTTTCTAGCAAACTCCATTAAGTGCTTCTATTTATCCTCTTACTCCTGAATAATTATTGTGTTTTATTGTAGATGTTCATGTAGGCCTTGGAAGAATTCTTACATTGTTAGTAGTCATTATTTCCAATAGGACTGTATCTTAATGATTATCATTATATATGTACCGTAGGATACCTAAATTCACCAACGGTCGACGGGTACCACGGACAACAGATTGTTGACCCATCTTACGATCGCAATGTCACGACCGCAGGAGTAGCGAACACTTCTTAACGTCAATCGTTTGTTGAGGTCGACACCCATTTTGTTGAGGACGACATACTGGTAGTCGACAAGCCAGCAACGATGTCCCGACATGTATCGCTCGCACGACGTTTCATATGTTTATGTCGACACAAACAGTGGTCGACATATAGTGAACGATATCATAGTAAACGGTTCAGCAGTTAAGAATAAGCAGTTACAAATATTAGCCCACGCCACGAATCACGCCGCGAATCACGCAAGTATTTGACTCAGTATCAAACACGACCTAGCAGTTACAACTTTCAAGTAGTCCACTTCGGTAAACTGTCCGGATTGCCAGGTAAACGGTTTATTTTCCTGTTTTAAATATACAAAGCACACCAGAAAAAAGGTACGTTTTTTCCCTTAGAGAAATTAGGAGAGAGAAATTACTCTTCTTCTTGATCACTTTGAACCAAAAGATTCAGGTGACCCCTTTTCTGACTTGAGCGTCGGAGTGCCTTTGCAGGTACCCAGCCCACCTTTTCCCAAGGAACAGAACATAAAGAGAGGAAGGAAGCATTGTGACAGACAACGTAAAGAGAAGCAGTTCAGTTTTGTTAGGTTTGTATCTCGGTCTCCACATCCCTACTGAAACAATATATCTTTTTGTTCAAACATATTGATTGATTCTCTGGTCTTCTGTATTTTTCTTACATCAATGTTTATTTCATGTAGAGCTTCTGTACTTGAAAAAGCCTCAAAATCAGTTTGGGATTTAATTGTAGACAATAATGGTCTGGGAAAGGAGAGATAAGTGAAACTGTTGAGCGAGTGTTTTGTCGACTGAGTGGCCAGGAGCCTCCATTCTTTCCACTTCCTAATGGTGAGCCGCAATCTGAAAAGGAGGCTGGCAACAGAAAAGAAAAAGGCAAGGGAAAGCAAAAGGAAAA


Gene Sequence:
>Vu_15324(+)
ATGAAAGCACAAATACAAATACTCCATCAAAGAAAAGGAGCTTTAGTGAAATCAATTTGGAAGGACCAGATGAAACTTCAACCAGGTTCTCTAATCCTGCGGCAGTATTGGAAGGTTCTGGCAAATCACCTGTATCAATTTCGAAGACTTGAGTTGCAAATTCGATAATCCTTTTGTAACTACAGTGATCAAATCTGGTAAATATATTATATTGACACTTTAGAGAACTTCACTACAGTGTTCTATTTTTGTTTAATAATATTTCTGTGCTTTAATAATTGGTATTTGGTATCTTGCAGAAACATTTTGATGATAACCAACCTCTAGGGCATAATTTCGAAGGCTCTGCTTCAACTAAGTTCAACAATGCTTTTAATAACTCAGATATGGAACAGTTGGATTTTCATCCATTCAGTTTAAATCAAGATATGAATCACAACCAAGTTGGTCACAACTCTGATTTGACTGGTCAAGTGGATTTATATCAGGACCTCGGGCATAACACCGAAATTAAACACTCAGAATCAAATCAATTTAGCATAGAAGGTTTTGATTGTAGCCAATTCTTTGGAGCTGAGGATACTGTGCATCATGGACAAAACATTATACCTAACATTCTTCCAAATATCTGCCCTCCACCATCTGCTTTCTTAGCTCCAAAATGTGCCCTGTGGGACTGTTTCAGACCCGCTCAAGGGGTAGAATGGTGCAGGAATTACTGTAGCAGTTGTCATGAGTTGTTGGCAAATAATGAAGGTCTTAGCATGACTCCAATTTTACGACCAGGGGGCATTGGTGTAAAAGATGGCCCTTTGTTTGTTGTTGTTCTTACGAAGACCCAGGGAAAGGAACTGGGCATCCCCAGTTGTGAAGGCGCCGCATCAACTAAATCTTCTTGGAATGCTCGAGGTGAGTACACAAAATTTATTACCTCTCTGTTGTATATCACTGCTTCATTTTAGGATAAATAATATACACATTGATCATGTGAAAGTCTTTGACATTGTTATCCAATCATAGACTTTGATGTATTGTAAGTTTGTTGATTGTATAATAACTACCATAAAAATTAAAGGGTATTGAAACCTCTGTCACATATCTTAATTTTTTCATTTTCATAGTTACTCCTCTACTACTTCTTTAATCTTACATTTTTTTATAGAGTAGAAAGACTCTCAAAATTGAAAGACAATACTTCAACAAGAAAATCACCATAAACGATTTGGAGATTGTCTCTTTGCTATTAGGGTTCATAGGGGTGAACAAAGGAGGAAATTTTTAATTTCATAAAGGGGTCAAGGAGCGGAAGACGATGAAGGTGTCGACGTTGGCGTGGTGGAGGAGGTTGGTGTTGGTGAAGATGGCGAGGTAGAAGAGAATGCATAA