Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15298 LG4 5806351 5807936 disease resistance RPP13-like protein 4
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 5806357 synonymous_variant p.Val371Val
A/C 5806378 synonymous_variant p.Gly364Gly
C/A 5806538 missense_variant p.Arg311Ile
A/C 5806571 missense_variant p.Ile300Ser
G/A 5806785 missense_variant p.Leu229Phe
T/C 5806872 upstream_gene_variant
G/T 5806874 upstream_gene_variant
G/A 5806992 upstream_gene_variant
G/C 5807026 upstream_gene_variant
A/T 5807104 upstream_gene_variant
T/C 5807163 upstream_gene_variant
G/T 5807264 upstream_gene_variant
C/T 5807276 upstream_gene_variant
T/A 5807389 missense_variant p.Lys183Ile
C/T 5807396 missense_variant p.Ala181Thr
C/G 5807408 missense_variant p.Glu177Gln
G/T 5807470 missense_variant p.Ala156Asp
C/T 5807473 missense_variant p.Gly155Glu
A/G 5807478 synonymous_variant p.Pro153Pro
C/A 5807618 missense_variant p.Asp107Tyr
G/T 5807744 missense_variant p.Pro65Thr
T/C 5807835 synonymous_variant p.Leu34Leu
A/C 5807894 missense_variant p.Leu15Val
C/A 5807900 missense_variant p.Val13Leu
T/A 5807907 synonymous_variant p.Ala10Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15298.1
MSIPTNKMKAVAVLLKRVKTARSQFRERGRDESLDRNLEKLRRELNKIRKLFEKVKNNEEELLHPLSEVDGHLRNLDSKRLNQDMDNICKRISNSAEKLLPKSNFDDSSGEEDHDRSRQQHKNQLPPPKKLNMNLRILADHALKCLLSLLVFPEGAVVKKRQTIYWWIGEGFLESTELKTAEKEGEDLTDMLLKSNVILAYGVIHFLLEYPTITYECYLLEGMPKGIEKLTQLQVLEGYAVGNSRESQDSISELANLKNLRRLSIHIGSEAVIEDGEFESWRGLSLEHLKISWGVSENGYIERIILPLRLKRLHLEGFPGQEIPEWLKPSKLPEECKELKLMGGKLKSFNHGENLEWRLEIVRIGYLKDLKVG*


CDS Sequence:
>Vu_15298.1
ATGTCTATTCCGACAAACAAAATGAAAGCAGTAGCTGTGTTGTTGAAACGTGTGAAGACAGCAAGGAGCCAATTCCGTGAAAGGGGAAGAGATGAATCATTAGATAGGAATTTGGAAAAGTTAAGGAGAGAATTGAACAAGATAAGGAAGTTGTTCGAGAAAGTAAAGAATAACGAAGAAGAACTGCTTCACCCTTTGTCAGAGGTGGATGGCCATCTTCGAAACTTAGACAGCAAGAGGTTGAATCAAGACATGGATAACATTTGCAAGAGAATAAGTAATTCTGCTGAAAAGTTGCTTCCAAAGAGCAATTTTGATGACTCATCTGGGGAGGAGGATCACGATAGAAGTAGACAACAACACAAGAATCAGTTGCCGCCGCCAAAGAAACTGAATATGAATCTACGGATCCTAGCAGATCATGCACTAAAATGTTTGTTGTCTCTCCTAGTTTTCCCTGAAGGAGCTGTTGTAAAGAAAAGACAAACAATTTATTGGTGGATTGGAGAGGGTTTTCTTGAAAGTACTGAACTGAAAACAGCAGAGAAAGAGGGTGAGGATCTGACGGATATGCTTTTGAAATCGAATGTGATTTTAGCGTATGGAGTTATCCATTTCCTCTTAGAATACCCTACAATCACATACGAGTGTTACTTGTTGGAAGGCATGCCAAAAGGGATTGAAAAACTCACACAGCTCCAAGTACTGGAGGGATATGCAGTAGGAAATTCTAGAGAGAGTCAAGACAGCATATCAGAGCTTGCAAATTTGAAAAATCTAAGGCGGCTCAGCATACATATAGGATCTGAGGCTGTGATAGAAGATGGGGAGTTTGAAAGTTGGAGAGGGTTGTCTCTTGAGCATCTAAAAATATCATGGGGTGTGTCTGAGAACGGGTACATTGAGAGAATAATTTTGCCTTTGAGATTGAAAAGATTGCATCTTGAAGGCTTTCCAGGGCAGGAAATTCCAGAATGGCTAAAGCCTAGCAAGCTGCCCGAGGAATGCAAAGAGCTGAAACTAATGGGAGGAAAGCTCAAAAGTTTTAATCATGGAGAAAATTTGGAGTGGCGTCTGGAGATAGTGCGTATCGGTTACCTTAAGGATTTGAAAGTCGGTTAG


Promoter Sequence:
>Vu_15298::LG4:5807936-5809936(-)
TAATTATTTTAATTTATATATTATTATTTAAATAATAAATAAAGAAATTTTTAAAAATATATTATTATTTAAATAATAAAATATGTAAATGGATGTTACGGATGTCAACATCCGTTGAAGGTGAAACGGATGTTGACATCCGTTTTATAAAAGGGCAAATAAGGTATGGGGAGGTGCAGGGAGCGGTTGGTGGTGGTGGAGGGAGCAACTCTCCAAAAATAATAGCAAACATTTGAAAACACATACAAACCGAATTTGGAAACCCATCCACTGGTAGTTTATAATAATTTCTGTTTACTTAACTATGATTAAGATTATAATCAAACTTGCTTTCTTGGATCCGCATCTCTCTCTAATGTGGATATAAGCACATTTACAAAATAATAGATTAAATAACTAAAGTGCATAAACTAAAATTAAGATTGAGTTTAAATCTCATATTAGGTAGAGAAATAAATGAGAAAGTAAAACAATGTAAAAATCCATTAAGACATTATCTTAATTTTTTGAATTGAGATTAATCTTAATAGTGTCCTATCTCCTTAGGAACAATTAGCTAGACAGTTTATTCATGTGCCAATAAATTAATAAATTAATAAATTAATTCTACGTTTAGAAGAAGTTAGGGATAACTTTGGTAGGAGAAAACAATTTATTTGGATTCTCTTTCAAACTACGACGTAAAGAATTGAGGTGAAACTTGTGTTGTTTGATTCTTTCATTCCTTGCAAACTCTTTAGAGGTTTAAATTGATGGCCATACATGGTTATAGCTAAACCACGTATACATATTCAACAATCTTTCACTTTCTCATTCACTCTCAGAGCAAACCGACCCTCATTTTTATCAAGGTTCTTTTTACACTCTATTATTAATTATCATAATTCTTTTTCTCTTTTCATTAATCTCTCATTTTTACAATGCCTCTACAATTTTACGCTCACTGTGGTAATCCATGCTATGCATAGGTGAATTTCGTATTACTAATACATGAACTAAGGTCTAAATAATATTCTATGCTACGAAGACTTTTCCTCTTTTTATATTTTTGTGATTTTTTCTTCATTAAACATTAGGCCGAGTGTGAAATAATATTATAATTTGAATATAAATGCTAAATTATCCTCTTAATAACAAATCAGAATTATACTGGTAAATCAAAGAGTGTTACATAGATATGTTAAATAGGTTCACCACGAGTTAACCTGACTCATGGGTTTAAGTTGGATTAAATTGGTTAAATTTAATTCTTTAAGTGTAGGTTAAATTGGATTCAACTTTTCATAAGTTAAATGGGATTAATTTGGGATGAAGGTGGGTTAACTTCCAATCCACCAACATCAACCCTTTATTAGTTTCGTTATCATTTTTTTACAAGTATTTTCTTTTATAATTATTTATTACTTCTAATTATGTAGATTGAAAATTTGTTCATTTTAAATACTAGAATTTTGTTCATGATGTTTAAATAGTTTGAATGTTTAATTTATTTGTTTGTCAAATCATATAGCTTGATAATTTAATTTTTAATTTCTATGTTTACAACAATATTTGGTAAAATAGATTAAGACTTTGATTGTATTGTGATAAAACAATGAGTTGAGTTAATCGATTTTGATTGTATCATAATAAATATAAATAATATAAAATAAATATAAATATATAAAATAAATTCAAAAACAAGTATTTTTGAGTGCAACAATCTACTAATCTACCAACTCATAATATAAGATGAATCAGATTATAAAATTTCAATTCACCAAGAGATGAGTGAGGTTGAACCAACACATTTTTAACTCAATTTGTAATAAATCAACCAATGTAAGCTAAATTGACTCACTTTAACCCCCTAATGTTACAAATCTCACTTTATTAAATTTTTTAATCGGATAGCAATAACAGAAAAGTGAGTTAGGAAATTTCAATATCGAAATGAGAGTTGTTGAGTGGGTGGTACTGTTAATTAACTCTATAATTATATGTTTGTTAGTAATTGGAAA


Gene Sequence:
>Vu_15298(-)
ATGTCTATTCCGACAAACAAAATGAAAGCAGTAGCTGTGTTGTTGAAACGTGTGAAGACAGCAAGGAGCCAATTCCGTGAAAGGGGAAGAGATGAATCATTAGATAGGAATTTGGAAAAGTTAAGGAGAGAATTGAACAAGATAAGGAAGTTGTTCGAGAAAGTAAAGAATAACGAAGAAGAACTGCTTCACCCTTTGTCAGAGGTGGATGGCCATCTTCGAAACTTAGACAGCAAGAGGTTGAATCAAGACATGGATAACATTTGCAAGAGAATAAGTAATTCTGCTGAAAAGTTGCTTCCAAAGAGCAATTTTGATGACTCATCTGGGGAGGAGGATCACGATAGAAGTAGACAACAACACAAGAATCAGTTGCCGCCGCCAAAGAAACTGAATATGAATCTACGGATCCTAGCAGATCATGCACTAAAATGTTTGTTGTCTCTCCTAGTTTTCCCTGAAGGAGCTGTTGTAAAGAAAAGACAAACAATTTATTGGTGGATTGGAGAGGGTTTTCTTGAAAGTACTGAACTGAAAACAGCAGAGAAAGAGGGTGAGGATCTGACGGATATGCTTTTGAAATCGAATGTGATTTTAGCGTATGGTAATAGAGAGTGTCCCATTGTCAATAAATTTCAAATCAATCCTCTCGTTCGTCCTGAGTTGCTGTCACTATCAACAGAAAATCACAGGAGTTATCCATTTCCTCTTAGAATACCCTACAATCACATACGAGGTAAATGGTCAGTACTTGAGCAAAAAGAAGTTGTACTAGGTGAAAATAGTTTGAAACCTAGGATAACTACTATTTTTAATGTTGGTGCCAGTTATTTAAATTTTGGATCTCAATGGTTGGATAAAAACATACAAAATTTAAAGGTGCTTCAACTTGGTTGAAGTAGGGAGTGAACGATTCCTACAGAAGTTGAAGAATCAAAAAGAATCTGACCTATTTTAGTCTTCGTGGGATATCAAGAATATCTAAGCTTCCACCCTCCATTACTCAACTTGAGAGCCTACAAATTCTTGATCTGAAAGCTTGCCACAACTTGGAGACACTGCCTAATGATATTTCCTCAATGAAAAGTCTGACACATCTCATTTTGTCCCAGTGTTACTTGTTGGAAGGCATGCCAAAAGGGATTGAAAAACTCACACAGCTCCAAGTACTGGAGGGATATGCAGTAGGAAATTCTAGAGAGAGTCAAGACAGCATATCAGAGCTTGCAAATTTGAAAAATCTAAGGCGGCTCAGCATACATATAGGATCTGAGGCTGTGATAGAAGATGGGGAGTTTGAAAGTTGGAGAGGGTTGTCTCTTGAGCATCTAAAAATATCATGGGGTGTGTCTGAGAACGGGTACATTGAGAGAATAATTTTGCCTTTGAGATTGAAAAGATTGCATCTTGAAGGCTTTCCAGGGCAGGAAATTCCAGAATGGCTAAAGCCTAGCAAGCTGCCCGAGGAATGCAAAGAGCTGAAACTAATGGGAGGAAAGCTCAAAAGTTTTAATCATGGAGAAAATTTGGAGTGGCGTCTGGAGATAGTGCGTATCGGTTACCTTAAGGATTTGAAAGTCGGTTAG