Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15294 LG4 5761606 5765188 PREDICTED: disease resistance RPP13-like protein 4
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 5761645 missense_variant p.Ser771Asn
A/G 5761697 synonymous_variant p.Leu754Leu
C/T 5761719 stop_gained p.Trp746*
A/C 5761721 missense_variant p.Trp746Gly
A/G 5761731 synonymous_variant p.Asp742Asp
G/T 5761759 missense_variant p.Ser733Tyr
G/A,* 5761784 synonymous_variant p.Leu725Leu
C/T,* 5761804 stop_retained_variant p.Ter718Ter
A/G,* 5761805 stop_lost p.Ter718Argext*?
G/*,A 5761833 synonymous_variant p.Arg708Arg
G/*,A 5761845 synonymous_variant p.Ile704Ile
T/*,C 5761848 synonymous_variant p.Gln703Gln
G/A 5761965 synonymous_variant p.Leu664Leu
A/*,G 5761996 missense_variant p.Leu654Pro
G/T 5762014 missense_variant p.Pro648Gln
G/A 5762167 intron_variant
G/T 5762176 intron_variant
T/A 5762265 intron_variant
A/G 5762270 intron_variant
G/A 5762275 intron_variant
C/T 5762280 intron_variant
C/T 5762286 intron_variant
G/A 5762297 intron_variant
C/T 5762306 intron_variant
G/T 5762335 intron_variant
G/A 5762350 intron_variant
A/T 5762370 intron_variant
G/A 5762371 intron_variant
T/C 5762372 intron_variant
G/A 5762396 intron_variant
C/T 5762423 intron_variant
A/G 5762430 intron_variant
T/C 5762594 intron_variant
T/G 5762596 intron_variant
C/A 5762600 intron_variant
C/A 5762602 intron_variant
C/T,* 5762612 intron_variant
T/C,* 5762614 intron_variant
T/C,* 5762616 intron_variant
G/T 5762681 intron_variant
A/T 5762744 intron_variant
T/C 5762911 intron_variant
C/A 5762917 intron_variant
T/C 5762925 intron_variant
C/G 5762927 intron_variant
C/T 5762980 intron_variant
A/T 5762992 intron_variant
C/T 5762993 intron_variant
C/A 5763009 intron_variant
T/G 5763057 intron_variant
A/C 5763068 intron_variant
T/A 5763075 intron_variant
T/C 5763082 intron_variant
T/G 5763091 intron_variant
T/C 5763092 intron_variant
A/T 5763094 intron_variant
A/T 5763095 intron_variant
C/T 5763159 intron_variant
T/G 5763164 intron_variant
C/G 5763173 splice_donor_variant&intron_variant
G/T 5763219 missense_variant p.His587Asn
A/C 5763231 missense_variant p.Trp583Gly
A/T 5763232 synonymous_variant p.Val582Val
C/A 5763247 missense_variant p.Met577Ile
A/G 5763440 intron_variant
T/C 5763453 intron_variant
G/T 5764622 synonymous_variant p.Leu189Leu
T/A 5764629 missense_variant p.Glu187Val
G/T 5764995 missense_variant p.Thr65Lys
A/G 5765039 synonymous_variant p.Asp50Asp
C/G 5765051 missense_variant p.Lys46Asn
T/G 5765065 synonymous_variant p.Arg42Arg
T/C 5765073 missense_variant p.Glu39Gly
A/G 5765077 synonymous_variant p.Leu38Leu
C/T 5765086 missense_variant p.Asp35Asn
G/C 5765130 missense_variant p.Thr20Arg
C/G 5765132 synonymous_variant p.Thr19Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15294.1
MSIRTNKMKAVAVLMKQLTTARNKFHEKGRDESFDKKLEKLRLDLKRIKDVFVEVKKNEEKLLDTLAEVYGHLQRLDRKKLDEDMEGICKRIRDSSHNLLPTLVFDDSYKEESYKEESYKEESYKEESYKEESYKEESYKEESYKEEDDRGGEISHSSQQLVRPHQRQSWTAGDFNLLDYLLKACFERLLIFPENAIIRKRIAIDLWIAEGLIENTDNNTAEEWGEDVVHDLLKFKVIVRYGSTNDPLVNKFQIPPDIRSRQLKLYLDGDLKSIRPRPLLLYRKKVTVDEVDTKNVTSFNIFNIGTSYLNFGPQWVTDSFKNIEVLQLGRWQDSPIHHIEVGSEEFLKELIKLKRLKYLSLRGISRIFEIPSSVAKLESLLILDLKACHNLETLPDDISSMKSLTHLIMSDCCLLEGMPKGIEKLTDLQVLKGFLITTSEKTPCTISDLANNLTNLRRLSIRIGSEAVIRDGEFKSLEKFRKLKHLKISWSVSDPRYAKIPIKLPLGLRKLHFECFPGKTLIECIPLFHLSFRYTFPPELNITGGRLESMTTNFLLGLPVYILRLNIRIGSEAVIRDGEFRSLEYFPSLKHLKISWSVSDPSPDDRRCLQTTAAADPPLQIRRPCCHSRSVATPDLPMPLLPQPFFPSASDVAAAAAPDLLLLPQPFFPSASDAAAAAPDLSLPPLPQPFFPSASDAAAAAAPNLPLPLLPQPFFPSVSDAAAAAAPDLLLFFCFFFISGFGFSVLGFSGFGFFGFGIFLLLKNNFTCTTQPSEPLLGLKVYT*


CDS Sequence:
>Vu_15294.1
ATGTCGATTCGAACAAACAAGATGAAAGCAGTAGCCGTGTTGATGAAGCAGTTGACGACAGCAAGGAACAAATTCCATGAAAAGGGAAGAGATGAATCATTTGATAAGAAATTGGAGAAGTTGAGGTTGGATCTGAAGAGAATAAAGGATGTGTTTGTGGAAGTGAAGAAGAATGAAGAAAAACTGCTGGACACATTAGCAGAGGTGTATGGCCATCTTCAGAGGTTAGACCGTAAGAAGCTGGATGAAGACATGGAGGGCATTTGCAAGAGGATTAGAGATTCCTCTCACAATTTGCTCCCAACGCTTGTTTTTGACGACTCATATAAGGAGGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAGGAGGATGACAGGGGTGGCGAAATATCTCACTCATCACAACAATTGGTGCGCCCCCATCAAAGGCAGAGTTGGACTGCGGGAGATTTTAACTTGCTAGACTATTTATTAAAAGCTTGCTTCGAGCGTCTCCTAATTTTTCCTGAGAACGCTATCATAAGGAAAAGAATTGCAATTGATTTGTGGATTGCAGAGGGTTTGATCGAAAATACAGACAATAACACAGCAGAGGAATGGGGTGAGGATGTGGTTCATGATCTTTTGAAATTTAAGGTGATTGTACGCTATGGTAGTACAAACGATCCCCTTGTCAATAAATTTCAAATTCCTCCTGACATCCGTAGTCGTCAGTTGAAGTTATATTTAGATGGAGATCTAAAGTCTATTAGACCACGGCCGTTACTGCTTTATAGAAAAAAAGTAACAGTAGATGAAGTTGATACAAAAAATGTTACTTCATTTAATATTTTTAATATTGGCACAAGTTATCTGAATTTTGGACCGCAATGGGTCACCGATTCATTCAAGAATATAGAAGTGCTTCAACTTGGGCGTTGGCAAGATTCACCTATACATCACATTGAAGTTGGGAGTGAAGAATTCTTGAAAGAGTTGATAAAGTTAAAGCGGTTGAAATATCTGAGTCTACGTGGGATATCAAGAATATTCGAGATTCCATCCTCCGTTGCTAAACTTGAAAGTCTACTAATTCTTGATCTGAAAGCTTGCCATAATTTAGAGACACTACCTGATGATATTTCATCAATGAAAAGTCTGACACATCTGATTATGTCCGATTGTTGCTTACTGGAGGGCATGCCAAAGGGGATTGAGAAGCTCACTGATCTCCAAGTCCTCAAGGGATTTTTAATAACTACTTCTGAAAAGACTCCTTGCACAATATCAGATCTTGCTAATAATTTGACAAATTTAAGGCGACTCAGCATACGTATTGGAAGTGAGGCCGTGATCAGGGATGGGGAATTTAAAAGTTTGGAAAAGTTTAGAAAACTGAAGCATCTGAAAATATCTTGGAGTGTGTCTGACCCAAGATATGCTAAAATTCCCATCAAGTTGCCATTAGGTTTGAGAAAGTTGCATTTTGAATGTTTTCCTGGAAAGACTTTAATAGAATGTATTCCACTTTTCCATCTGTCGTTCCGTTATACGTTTCCACCTGAGCTAAATATAACTGGAGGAAGACTGGAAAGTATGACGACAAATTTCTTACTAGGATTGCCCGTGTACATACTGCGTCTGAACATACGTATTGGAAGTGAGGCCGTGATCAGGGATGGGGAGTTCCGAAGTTTGGAATATTTTCCATCACTAAAGCATCTGAAAATATCTTGGAGTGTGTCTGACCCAAGTCCAGACGACCGCCGCTGCCTCCAGACGACCGCCGCTGCAGATCCGCCGCTCCAGATCCGCCGCCCCTGTTGCCATTCCAGATCCGTCGCCACTCCAGATCTGCCGATGCCGCTGCTGCCTCAGCCATTCTTCCCCTCCGCGAGTGACGTTGCCGCTGCTGCTGCTCCAGATCTGCTGCTGCTGCCTCAGCCATTCTTCCCCTCCGCGAGTGACGCTGCCGCTGCTGCTCCAGATCTGTCGTTGCCGCCGCTGCCTCAGCCATTCTTCCCCTCCGCGAGTGACGCTGCCGCTGCTGCTGCTCCAAATCTGCCGCTGCCGCTGCTGCCTCAGCCATTCTTCCCCTCCGTGAGTGACGCTGCCGCTGCTGCTGCTCCAGATCTACTCTTGTTCTTCTGCTTCTTCTTCATATCTGGTTTTGGATTTTCAGTTTTGGGATTTTCTGGTTTTGGATTTTTTGGTTTTGGGATTTTCTTGTTGCTGAAAAACAATTTCACTTGCACCACTCAGCCGTCAGAGCCACTTCTCGGGTTGAAGGTTTACACATGA


Promoter Sequence:
>Vu_15294::LG4:5765188-5767188(-)
TTTTTCCTCCACAAGGTACATATAATATATAGTACAATAAAAACTTGATAATATTGACTAAAATCATTGCTGCAATTTGTTATGGATAAATATTGTATGAATAGAAAATGTCACAAAAGCCAGTTGTGTACAACTTACAAACTTATTAAATCAATGTCTACACTTTGGAGAAAAATATGCAATTTTTGTGTGAAAATGATGACATCAATATGATAAATAATGAATTTCAAAATTGATCTATAGTAGGCTGAGGTTTTCATAACCTATATAAATATAATATCCCTCTCGGGAAAAAATTGGTTACCAAGCGGAAAGTTATTTGGATTAAGAAAAACATAGTGTAAATAAATAAAAGAAAAGTTTGTAAGTGATTTAATAAGTTTGATAACATTGTAATATTATAATTTTGTCTTTACGGTTAAAATTAATTTAAAATAGAGACTAGTTTAGAAAAAAAATAGTAAATTATTAAAATCTTGCAGTTAATTTTAGATATTAGACTCCAATTCAAAAAAAAACTATAATTTTTAAAAATAAGGACTATTTTAAATATTAATAATTTTTAATTTATAAAAGAGAAATGCATACACTTAATAAACGGACATGGAGAGGGGCTATGAACCCCAATAACAACGCGTGGGCTAGACTCTACAATCACAAGCTCTTGTTCCTGCACTTAGCAGTGAGTTATGTTGGAAGTCTCATATCGATTAAAGATAAGACTAATTCATAGTTTATAAATGAGTGCAAACCTCACCTTACAATATGGTTATGGTTTTGTGAGATTGAGTTAAACTTAAAATTTAATTTTTAACATGATTTAAAGTTCCCTTCTAACAGGTTGGAGTAAGCATGACCTTATTCATGTTGCCAATATCTTTAGAGTCTCTGATCAAAATCTTTATATCCAAAGCATAACAAATATTATATACGGTCTCTTTTATGAAAAGAACGAAGCTTGAAGAAACATACTTTGTTTTTTGGATCACTAAACTCAAAGAATGTGCAGTCCCTCCATATCAAGTATACTTTCCTTCAAAACTATCTTTAATTATTTTAGGTTATATTTTAACTATTTAAAGCATCTAACAATCTGATGAGCTTGTTCTAACCACGATCTTTCACAACATTTTGCAGATGTTTTCCCCAATTTCTATGCCAAAATAGGATCCTTCTCCTCAAATTCCTCCTGGTGTGAGGTAAAATGTACCTCAACTTCTCTTTTGTTGTTTATGATTGATTATTATAATTTCTTAATGTCCATTTTTCAATCATATGACTAGCTTCGATTGCACTTTTTCTAAAGCTAGATTTTTGTTGTTGTGAGTAGCAGGGTGTAACTGAAAAGAGTTGGACGAGATTATCTCTTTGACTGAATACATTCCTACATCTAGCTTTTCTTTGGACCCAATTCTTTCAGAGGTTCAAATCCATTTTGTTATTGAAATTATTTAGAAATAATAATGTTTTGTGCGATGATGCTTCTAAAGATTTTTATATCATTTGTTAATGGAACTCCATATATCACCCTATTGTCAGATCTTAGAGTTCAAACTTTCTCCTTTGAATTAAATAATTTTGAGCGTATAATTTATGTTGTTTTATTTGTAGAGAAAGTTTGATTTGAGTTTTATTTAGCTTATTTATATTATGTTTTACAGTATTCATCAAGAATGTTGTTTATTCATTCTTGATGATACTCTTATAAGCTTGATCTTTTATATAGCTTAGCAATGAAAACTATAGTTGGTTCATGCACGATGTATCATCTACCAGCAAGTTTTATACTCATGCTCGCTTTTTATTTTATTGACATTATTCTAAAGAGTCTAGCATATCTCCAGAACGTGTTTGCTATTGTAATTGTTGTTTTCTATTTTTTTTTTCATACTTGTCTTCGCCTCTAAAGAGGTAGGTGTGAGTGTATAGATACACAGAAAAAAAAAATCGAAGTAGGAAAAATTGGGTGACATTGTGTATATTGGTTTGTTTGTAGTAAA


Gene Sequence:
>Vu_15294(-)
ATGTCGATTCGAACAAACAAGATGAAAGCAGTAGCCGTGTTGATGAAGCAGTTGACGACAGCAAGGAACAAATTCCATGAAAAGGGAAGAGATGAATCATTTGATAAGAAATTGGAGAAGTTGAGGTTGGATCTGAAGAGAATAAAGGATGTGTTTGTGGAAGTGAAGAAGAATGAAGAAAAACTGCTGGACACATTAGCAGAGGTGTATGGCCATCTTCAGAGGTTAGACCGTAAGAAGCTGGATGAAGACATGGAGGGCATTTGCAAGAGGATTAGAGATTCCTCTCACAATTTGCTCCCAACGCTTGTTTTTGACGACTCATATAAGGAGGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAAGAGTCATATAAGGAGGAGGATGACAGGGGTGGCGAAATATCTCACTCATCACAACAATTGGTGCGCCCCCATCAAAGGCAGAGTTGGACTGCGGGAGATTTTAACTTGCTAGACTATTTATTAAAAGCTTGCTTCGAGCGTCTCCTAATTTTTCCTGAGAACGCTATCATAAGGAAAAGAATTGCAATTGATTTGTGGATTGCAGAGGGTTTGATCGAAAATACAGACAATAACACAGCAGAGGAATGGGGTGAGGATGTGGTTCATGATCTTTTGAAATTTAAGGTGATTGTACGCTATGGTAGTACAAACGATCCCCTTGTCAATAAATTTCAAATTCCTCCTGACATCCGTAGTCGTCAGTTGAAGTTATATTTAGATGGAGATCTAAAGTCTATTAGACCACGGCCGTTACTGCTTTATAGAAAAAAAGTAACAGTAGATGAAGTTGATACAAAAAATGTTACTTCATTTAATATTTTTAATATTGGCACAAGTTATCTGAATTTTGGACCGCAATGGGTCACCGATTCATTCAAGAATATAGAAGTGCTTCAACTTGGGCGTTGGCAAGATTCACCTATACATCACATTGAAGTTGGGAGTGAAGAATTCTTGAAAGAGTTGATAAAGTTAAAGCGGTTGAAATATCTGAGTCTACGTGGGATATCAAGAATATTCGAGATTCCATCCTCCGTTGCTAAACTTGAAAGTCTACTAATTCTTGATCTGAAAGCTTGCCATAATTTAGAGACACTACCTGATGATATTTCATCAATGAAAAGTCTGACACATCTGATTATGTCCGATTGTTGCTTACTGGAGGGCATGCCAAAGGGGATTGAGAAGCTCACTGATCTCCAAGTCCTCAAGGGATTTTTAATAACTACTTCTGAAAAGACTCCTTGCACAATATCAGATCTTGCTAATAATTTGACAAATTTAAGGCGACTCAGCATACGTATTGGAAGTGAGGCCGTGATCAGGGATGGGGAATTTAAAAGTTTGGAAAAGTTTAGAAAACTGAAGCATCTGAAAATATCTTGGAGTGTGTCTGACCCAAGATATGCTAAAATTCCCATCAAGTTGCCATTAGGTTTGAGAAAGTTGCATTTTGAATGTTTTCCTGGAAAGACTTTAATAGAATGTATTCCACTTTTCCATCTGTCGTTCCGTTATACGTTTCCACCTGAGCTAAATATAACTGGAGGAAGACTGGAAAGTATGACGACAAATTTCTTACTAGGATTGCCCGTGTACATACTGCGTCTGAAGTACCTTAAACAATTAAATATCAACATAGATGATTTGAAAACATTATTTCCTTTGCTGAATTACGTAGAGATTAAACAAATCTCAAACCATTCATACATTGAGCGTGAATATTGAGCGTGAATATGAATAGAATATGAATAGAATGTTGATTTGAAAGAGCGGTAAAATGTTGTGTATTCTTATTATATTCTCTCAATATATTCTCTCAGCATACGTATTGGAAGTGAGGCCGTGATCAGGGATGGGGAGTTCCGAAGTTTGGAATATTTTCCATCACTAAAGCATCTGAAAATATCTTGGAGTGTGTCTGACCCAAGGTATGCTAAAATTGGTATCCGTTTGCCAGTAAGTTTGAAAAAAGTTGCATCTTGAATGTTTTCCTGGAAAGAGTCTTCTTGAATGTTTTCCAATGTCCATTAGAATATCACATATAATAGCACGTGAGCTAAATATAACTGGAGGAAAACTGGAATGTATGGATGACATTATTTTAGATTGTGTGGAAATATTGCGTCTGAAGTATCTTAAGCAATTGAATGTCTACCTACATGATTTGAAGATTTGGATTCCTAGGCTGAAATATCTAGAAATTAAACAAATCTCAAACCATTCATATATTGAGCGTGAATTTGAATATGATGCTCATTGGGAAAGAGAATGGAGTTGATGTGGTAAAATGTTGTGTATACTTATATTGTTCTCTCAATCATTGTTATTTATATAATGTTATTCCCAAAAGTCTACACTATGCTGTATATAACTAGAGTGAGCAAAAGTTGAAAAAATAAGGAATCAATAAATATCTATCTCTCTATCACTCTATTATATATATATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTTTACATAAATAATTTTATGAGAAAAAGCATAATTTTAACTACACAATAAGTTTTGATAAAAAGTCAATAAGTTTTGATAAAAAGTCAATAAGTTTTGATAAAAAGTATGGTATCTATGGATATACTAGTAAAAAAAGGGGAAACTAACGCGTTATATATACGCAAAACTCGAAGCGTAAAAGACTATATGCCTCGGTTACAGCTTAACCCGAGGTCGAATGGTAATACTGTCTCGGTTAGAAGCAGACCCGAGGCCTATACATCTGTCCCGAGGATACAACTTTTTTAAAAAGCGCTATTGCCTCGGGTTTCGCAGACGACCGCTGCCTATACACTTACTACCTATCCTCTTGAACCTTTTCATTTTCACACTTGAACAACTTCTTATTTCTCGGTGCTCTCCCTTCCCCTTTGTGCTCTCCCATTCTTCCCATTGCCGTGCACAGTCCAGACGACCGCCGCTGCCTCCAGACGACCGCCGCTGCAGATCCGCCGCTCCAGATCCGCCGCCCCTGTTGCCATTCCAGATCCGTCGCCACTCCAGATCTGCCGATGCCGCTGCTGCCTCAGCCATTCTTCCCCTCCGCGAGTGACGTTGCCGCTGCTGCTGCTCCAGATCTGCTGCTGCTGCCTCAGCCATTCTTCCCCTCCGCGAGTGACGCTGCCGCTGCTGCTCCAGATCTGTCGTTGCCGCCGCTGCCTCAGCCATTCTTCCCCTCCGCGAGTGACGCTGCCGCTGCTGCTGCTCCAAATCTGCCGCTGCCGCTGCTGCCTCAGCCATTCTTCCCCTCCGTGAGTGACGCTGCCGCTGCTGCTGCTCCAGATCTACTCTTGTTCTTCTGCTTCTTCTTCATATCTGGTTTTGGATTTTCAGTTTTGGGATTTTCTGGTTTTGGATTTTTTGGTTTTGGGATTTTCTTGTTGCTGAAAAACAATTTCACTTGCACCACTCAGCCGTCAGAGCCACTTCTCGGGTTGAAGGTTTACACATGA