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ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14995 LG3 55637879 55639714 PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 55637901 missense_variant p.Ile8Thr
T/A 55638020 missense_variant p.Ser48Thr
A/T 55638156 missense_variant p.His93Leu
C/T 55638278 missense_variant p.Arg134Cys
C/T 55638283 synonymous_variant p.Pro135Pro
G/A 55638401 missense_variant p.Asp175Asn
G/A 55638411 missense_variant p.Cys178Tyr
C/A 55638415 synonymous_variant p.Leu179Leu
A/T 55638562 missense_variant p.Lys228Asn
G/A 55639016 missense_variant p.Ala380Thr
G/A 55639018 synonymous_variant p.Ala380Ala
C/T 55639022 synonymous_variant p.Leu382Leu
G/T 55639057 missense_variant p.Arg393Ser
G/T 55639063 synonymous_variant p.Leu395Leu
T/A 55639189 synonymous_variant p.Leu437Leu
T/C 55639192 synonymous_variant p.His438His
G/C 55639306 synonymous_variant p.Val476Val
T/A 55639319 missense_variant p.Ser481Thr
G/A 55639332 missense_variant p.Gly485Glu
G/A 55639364 missense_variant p.Gly496Ser
C/T 55639405 synonymous_variant p.Thr509Thr
T/A 55639419 missense_variant p.Val514Asp
C/T 55639423 synonymous_variant p.Tyr515Tyr
C/T 55639429 synonymous_variant p.Phe517Phe
G/A 55639433 missense_variant p.Val519Ile
T/G 55639437 missense_variant p.Val520Gly
A/G 55639441 synonymous_variant p.Leu521Leu
C/T 55639506 missense_variant p.Ala543Val
T/C 55639515 missense_variant p.Val546Ala
G/A 55639575 missense_variant p.Gly566Asp
C/T 55639576 synonymous_variant p.Gly566Gly
C/A 55639626 missense_variant p.Ala583Glu
G/A 55639628 missense_variant p.Ala584Thr
G/A 55639630 synonymous_variant p.Ala584Ala
G/T 55639649 missense_variant p.Asp591Tyr
C/T 55639653 missense_variant p.Ser592Leu
G/T 55639657 missense_variant p.Arg593Ser
G/A 55639661 missense_variant p.Val595Met
T/C 55639673 synonymous_variant p.Leu599Leu
G/A,* 55639678 synonymous_variant p.Arg600Arg
G/A 55639680 missense_variant p.Arg601Gln
G/A 55639686 missense_variant p.Arg603Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14995.1
MSSSLFVIFLFLSIFTPCNTQTCSSNNTNTNPNNLCPPFTSHPPFPFSSTPGCGHPSFHITCSSPHSFISINNLSFSILSYNSNTSSITLLPHPHPTPHPNCPSFPSIPTRSINLSATPFRVSAATCSRLSFLRPCSPPSLPNCSHCPSQCHLIKTPSHLFPDCRSTHHSPQYSDSPCLTDILGFLQQFLNKGIQLDWDQSRDPYFTNCTVCRANNGTCGFNSSSQNKPFLCFRYRSQSTLTPPWIRKFKPNKMAFFSTVIAITSLLLLISVATAILRSARSKASSAATQQDPTTLFLHHHRSASLLPPVFTYDDLAAATHNFDPKWKIGDGGFGSVYLAQLRDGRLAAVKYLHRNHSSAAFSTKSFCNEILILSSIHHANLVKLHGYCSDPRGLLLVYDYIPNGTLAEHLHHRKGSLTWQVRLDIALQTALVMEYLHFSVVPPVVHRDITSSNIFVERDMRIKVGDFGLSRLLVVQDTTSSSNGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGKKAVDQNRDKREMALADLVVSRIQMGQLHQVLDPVFKLGDSDGVAAVAELAFRCVAADKDDRPDSREVVEELRRVRSRTAVAKE*


CDS Sequence:
>Vu_14995.1
ATGTCTTCCTCCCTCTTCGTCATTTTCCTCTTCCTCTCCATCTTCACACCCTGCAACACTCAAACTTGCTCTTCCAATAACACAAACACAAACCCTAATAATCTCTGCCCTCCCTTCACCTCTCACCCACCTTTCCCTTTCTCCTCCACACCAGGCTGTGGCCACCCCTCCTTCCACATAACCTGCTCCAGCCCCCATTCTTTCATCTCCATCAACAACCTCTCCTTCTCCATACTTTCCTACAACTCCAACACCTCCTCCATAACTCTCTTACCTCACCCTCACCCAACGCCTCACCCTAACTGCCCCTCCTTCCCCTCCATTCCTACCCGCTCCATCAACCTCTCCGCCACCCCTTTTCGTGTCTCAGCTGCCACCTGCTCTCGCCTCTCCTTCCTCCGCCCCTGCTCGCCGCCTTCCCTCCCCAACTGCTCCCACTGCCCCTCCCAATGCCACCTCATCAAAACTCCCTCCCACCTCTTCCCTGACTGCAGATCCACCCACCACTCCCCTCAGTACTCAGACTCCCCCTGCCTCACCGACATCCTCGGCTTCCTCCAGCAGTTCCTCAACAAAGGAATCCAACTCGACTGGGACCAAAGCCGTGACCCGTACTTCACTAACTGCACCGTCTGCCGCGCCAACAACGGCACCTGCGGGTTCAACTCCTCCTCCCAGAACAAACCATTCCTCTGCTTCCGCTACCGCTCCCAATCCACACTCACCCCACCATGGATTCGCAAATTCAAACCGAACAAAATGGCCTTTTTCAGCACCGTCATTGCCATCACCTCCCTGCTTCTCCTTATCTCAGTAGCCACCGCCATCCTCCGCTCGGCCAGATCAAAGGCCTCCTCCGCCGCTACGCAGCAAGACCCCACCACACTCTTCCTCCACCACCACCGCTCCGCCAGTCTCCTGCCCCCGGTCTTCACCTACGACGACCTCGCTGCCGCTACCCACAACTTCGACCCCAAGTGGAAAATCGGGGATGGCGGGTTTGGGTCCGTATACCTCGCGCAGCTCCGCGACGGTCGCCTTGCGGCGGTTAAGTACCTCCACCGCAACCACTCCTCCGCCGCGTTCTCTACCAAGTCCTTCTGTAACGAGATCCTCATCCTCTCCTCGATCCACCACGCGAACCTGGTGAAGCTCCACGGTTACTGCAGCGACCCGAGGGGGCTGCTCCTGGTCTACGATTACATCCCCAACGGAACCCTGGCGGAGCATTTGCACCACCGCAAAGGATCTCTGACGTGGCAGGTGAGGCTCGACATCGCGCTACAGACGGCGTTAGTGATGGAGTATCTTCATTTCTCGGTGGTTCCACCGGTCGTACACAGAGACATCACGTCGTCGAATATTTTCGTGGAGAGGGATATGAGGATCAAGGTGGGAGATTTCGGGTTGTCGCGGCTTCTGGTGGTGCAGGACACGACGTCTTCTTCGAACGGGTTTGTTTGGACCGGGCCTCAAGGAACACCGGGCTATCTGGACCCAGATTACCACCGCTCATTCCGGTTGACCGAGAAGAGCGACGTCTACAGTTTCGGAGTTGTGTTATTGGAGCTTATCTCGGGAAAGAAAGCGGTGGACCAGAACAGAGACAAGCGCGAAATGGCGCTTGCGGATTTGGTTGTTTCCAGGATCCAGATGGGGCAGCTCCACCAAGTTCTGGATCCGGTCTTTAAACTCGGCGACAGCGATGGAGTCGCCGCCGTCGCAGAACTTGCATTCCGCTGCGTGGCGGCGGATAAGGACGACCGGCCGGATTCAAGGGAGGTGGTGGAGGAGTTGCGGCGGGTGCGGAGTCGGACGGCGGTGGCAAAGGAGTGA


Promoter Sequence:
>Vu_14995::LG3:55635879-55637879(+)
ACACGACCTACATATGGCCCGTAATTTATTTGAAAGATTCTCATTCTCATAATTTTCGAGTAAACTTACACTTGAAGTGTAAAATGAACTTATCATTATGGATGTTTCCTCTTATTTGTGAAAAAGTAAGGAAAAATTATAAGATTAGTTTTTTCTTGTCAAACTCAAAATATGTGAAATGTCAAAAAAATAAGTATTGTACAATACCGTTCTAAGATTATTTCATGATCTATGTATTTCAACACTAAAGTTTTATATTCGAAGTCAACCAAATTAAGAATAATATAATATTATAACTGAAATTATCGTAACACCCACACTTTTAAGAGATATGTTTGAAAAGGTCAACATTAAGAGCAATCTAACACTTATTTAAATAAGTGTTTGATTTTTTCAAATATGTCTTGAAGAAGTGTAACATGCTTAATCAAAATTAAAATGATATAAAATAATCCACTATTCTTTTAAACAAATATTTAAAGAATTTCGAATATGACTTGAATAAACATTTATTTATTTTATTTTCAATTATTTTTTTAATTTGAACTAGTTTGAGTTATATTTATATATTATCTTCTTTCTGTTTTTTTTTCTGGGATGATTTTAATGTACTCTGATTTTTTTCTAAACATGATTCGAATTCTTACTTATTTTATTTATTTATAATTGATAATATGCATTAATTTTTTCCTTCCCACATGTAATTACTTTTATGCAGGTGACTGCTATAGGAATTTAGGTTTATTATTTAAGATAATACATCAATTTATTAAGCATGAATTTAATTAATTTAAATAATGATACTTTACAGAGCAGCTTATTTTAATTTACTCATATTTCACAATAGAATTCTATTTAATTTATTTAAACTTGACTTGTAACATGACAAACTTATATGTTAAAATATTAAATTTAACCACACATAATTTTTTAATAGGAAGATAATTTGATTAATTTATACATAATCAAATTAACACATTTTTTTATTTGATTATATTAATAAAATTATTTACAAATTTTCATTAATTTCCCTTTTTATTCATTTATACTTAATTTTTATATTTTTAATTAATATAAATTTACTTTTGTTGTTTTTTTTTCCTTTCTTTATTTTTTCACTTTTCATATATAATCTCTAATAAAGATTGACGTTTCGATGACTTACATTTAAACGTTATTTTTTATTTTTAATTTGAAAACCATAGGTGTGACTATAAAAAGGGTACATTCCTTGATTATATTTGACTTGGCTAAAAGTACAAAATTATTATAAATATATATATTTTCTGTAATTTTATATTTCCCCAAGTACTATATTTATTTATATAGTATGTAATATGTACCACACAATTAATATATTTGTAAAGTATCATAATGTTTTAAAATATTTTTCAGTCGTTCAACGGTAAGGTGCATTTAAGTGATGCTAAATTTTAAAATACTTGTGGAGGTAACCACTGAAAATAGGTAAGTTGTTTGTATTTTTTTTTATAAATTAAAAAAAGAAGTTGCTTGGAAGAGTGAAAATGGAAGTCAGAAAAGGAGAGATGAATTCCGGCAGTCAGCAGGAAGGCCCCACCAAGCGGAAGTGGCGCGCAACACTTCCATCTTTCCAGAATTATTTTTGTTTGAATCAATTGGAGCCAAAACACAATTAATGAAAAATTGAGGTCAGTTTTGCAAATCTCTTAATCCAAATAAAGTTTATGTTTCATTTATGAAAGTAATTTCAGACATAAACATCTGAAACTTGGAATAAAAAACATAATTACTTAAAAGGTGATTACTTATAGACTATTTTGAGAAGAGAGCATTTGTCTTTTATCCCACTGCTGCACGTGACCCTCTTTCAACCTTCTCTCTCCAAGTCCAACAACATAGAATAGAACCTAGGAGTAGTTGTAATGGTTGCTGTAACCCCACTTCTTTCTTCCAAGTCCAGATCCCATATCGGTTAAAACAGATCCCTTCCATCCATGATTCTATCTTCTTCTCCTCCA


Gene Sequence:
>Vu_14995(+)
ATGTCTTCCTCCCTCTTCGTCATTTTCCTCTTCCTCTCCATCTTCACACCCTGCAACACTCAAACTTGCTCTTCCAATAACACAAACACAAACCCTAATAATCTCTGCCCTCCCTTCACCTCTCACCCACCTTTCCCTTTCTCCTCCACACCAGGCTGTGGCCACCCCTCCTTCCACATAACCTGCTCCAGCCCCCATTCTTTCATCTCCATCAACAACCTCTCCTTCTCCATACTTTCCTACAACTCCAACACCTCCTCCATAACTCTCTTACCTCACCCTCACCCAACGCCTCACCCTAACTGCCCCTCCTTCCCCTCCATTCCTACCCGCTCCATCAACCTCTCCGCCACCCCTTTTCGTGTCTCAGCTGCCACCTGCTCTCGCCTCTCCTTCCTCCGCCCCTGCTCGCCGCCTTCCCTCCCCAACTGCTCCCACTGCCCCTCCCAATGCCACCTCATCAAAACTCCCTCCCACCTCTTCCCTGACTGCAGATCCACCCACCACTCCCCTCAGTACTCAGACTCCCCCTGCCTCACCGACATCCTCGGCTTCCTCCAGCAGTTCCTCAACAAAGGAATCCAACTCGACTGGGACCAAAGCCGTGACCCGTACTTCACTAACTGCACCGTCTGCCGCGCCAACAACGGCACCTGCGGGTTCAACTCCTCCTCCCAGAACAAACCATTCCTCTGCTTCCGCTACCGCTCCCAATCCACACTCACCCCACCATGGATTCGCAAATTCAAACCGAACAAAATGGCCTTTTTCAGCACCGTCATTGCCATCACCTCCCTGCTTCTCCTTATCTCAGTAGCCACCGCCATCCTCCGCTCGGCCAGATCAAAGGCCTCCTCCGCCGCTACGCAGCAAGACCCCACCACACTCTTCCTCCACCACCACCGCTCCGCCAGTCTCCTGCCCCCGGTCTTCACCTACGACGACCTCGCTGCCGCTACCCACAACTTCGACCCCAAGTGGAAAATCGGGGATGGCGGGTTTGGGTCCGTATACCTCGCGCAGCTCCGCGACGGTCGCCTTGCGGCGGTTAAGTACCTCCACCGCAACCACTCCTCCGCCGCGTTCTCTACCAAGTCCTTCTGTAACGAGATCCTCATCCTCTCCTCGATCCACCACGCGAACCTGGTGAAGCTCCACGGTTACTGCAGCGACCCGAGGGGGCTGCTCCTGGTCTACGATTACATCCCCAACGGAACCCTGGCGGAGCATTTGCACCACCGCAAAGGATCTCTGACGTGGCAGGTGAGGCTCGACATCGCGCTACAGACGGCGTTAGTGATGGAGTATCTTCATTTCTCGGTGGTTCCACCGGTCGTACACAGAGACATCACGTCGTCGAATATTTTCGTGGAGAGGGATATGAGGATCAAGGTGGGAGATTTCGGGTTGTCGCGGCTTCTGGTGGTGCAGGACACGACGTCTTCTTCGAACGGGTTTGTTTGGACCGGGCCTCAAGGAACACCGGGCTATCTGGACCCAGATTACCACCGCTCATTCCGGTTGACCGAGAAGAGCGACGTCTACAGTTTCGGAGTTGTGTTATTGGAGCTTATCTCGGGAAAGAAAGCGGTGGACCAGAACAGAGACAAGCGCGAAATGGCGCTTGCGGATTTGGTTGTTTCCAGGATCCAGATGGGGCAGCTCCACCAAGTTCTGGATCCGGTCTTTAAACTCGGCGACAGCGATGGAGTCGCCGCCGTCGCAGAACTTGCATTCCGCTGCGTGGCGGCGGATAAGGACGACCGGCCGGATTCAAGGGAGGTGGTGGAGGAGTTGCGGCGGGTGCGGAGTCGGACGGCGGTGGCAAAGGAGTGA

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