Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14975 LG3 55426784 55428378 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 55426830 missense_variant p.Leu16His
T/A 55426953 downstream_gene_variant
G/A 55427047 downstream_gene_variant
A/T 55427064 downstream_gene_variant
C/A,* 55427159 upstream_gene_variant
A/T 55427160 upstream_gene_variant
G/T 55427237 upstream_gene_variant
T/G 55427240 upstream_gene_variant
T/G 55427272 upstream_gene_variant
T/C 55427311 upstream_gene_variant
C/T 55427573 missense_variant p.Pro114Ser
G/A 55427698 synonymous_variant p.Gln155Gln
A/T 55427704 missense_variant&splice_region_variant p.Gln157His
T/A 55427868 upstream_gene_variant
C/T 55427873 upstream_gene_variant
A/G 55427876 upstream_gene_variant
C/A 55428041 missense_variant p.Asn188Lys
T/A 55428045 stop_lost p.Ter190Argext*?
G/A 55428275 synonymous_variant p.Leu266Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14975.1
MAGGKLHAASTMSLLLQNERLPCSSEVLESLWAHTSNPASFQGSKSMVDFENVSGGRVTDRPFFQALEKEENCDDDYEGCFHQPGKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASYDRLKDKEKENSDDKSSPDAVNSPHQEPMDLISNSTSENGTKVSLPIMVTCKQEDANSAKSDVLDSDSPHCTDGNHPSSFVEPADSSHAFEPDHSDFSQDEEDNLSESLLTLPCLPKVEEACYDDPPENTCNFGFHVEDQTFCFWPY*


CDS Sequence:
>Vu_14975.1
ATGGCGGGTGGCAAGCTTCATGCTGCTTCAACCATGTCGCTTCTCCTCCAAAACGAAAGGCTCCCTTGCTCCTCGGAAGTCCTTGAATCTCTTTGGGCTCACACCTCTAACCCTGCTTCCTTCCAAGGTTCAAAATCTATGGTTGATTTTGAGAATGTTAGTGGCGGCAGGGTGACGGACAGGCCGTTTTTTCAAGCGTTGGAGAAGGAAGAGAACTGTGATGATGATTATGAGGGGTGCTTCCATCAACCGGGTAAGAAAAGGAGACTGACAAGCGAACAAGTTCAGTTCCTTGAAAGGAACTTTGAGGTGGAGAACAAGCTTGAACCTGAAAGGAAGGTCCAACTTGCAAAGGAGCTTGGGTTGCAGCCAAGGCAAGTGGCTATATGGTTCCAAAACCGAAGGGCAAGGTTCAAGACGAAGCAGCTAGAAAAAGATTATGGCACATTGAAAGCTAGTTATGACAGACTCAAAGATAAAGAGAAGGAGAATTCGGACGACAAGTCATCTCCTGATGCTGTCAATTCACCCCACCAAGAGCCTATGGATTTAATTTCAAATTCAACATCTGAAAATGGGACCAAAGTGTCACTCCCTATTATGGTAACATGCAAGCAAGAAGATGCCAATTCAGCCAAAAGTGATGTGCTTGATTCGGACAGCCCACATTGCACTGATGGGAACCATCCCTCTTCATTCGTGGAGCCTGCTGATTCCTCCCATGCTTTTGAACCAGACCACTCAGACTTTTCTCAAGATGAAGAGGATAACCTCAGTGAAAGCCTTTTGACCCTCCCTTGCTTACCAAAGGTTGAAGAAGCCTGCTATGATGACCCTCCTGAAAACACTTGTAATTTTGGCTTCCATGTTGAGGATCAAACCTTCTGTTTCTGGCCCTATTGA


Promoter Sequence:
>Vu_14975::LG3:55424784-55426784(+)
AATCGTGTATATATTCAATATAAGATTACTCTTATATATATAATTTTCTATATAGATTTATTTGTTAGGAGTCCTCTGTTTTTATATTCAAAATAATAACTAGTAATTTAGAAACTTTTAAAAAGAAACAAAGGAATGGAGAAAGTTATTGGGGAGGGATGTGAGTTCCTCGAAGGCCTAGGTGGTCTCAAGGAGGCAACGACAACCAACGGGTATTTTGATGAACTCGGGATAGAGCTTGGTAGCGAGGAGGCACGTAATCATGTTGGTGATTTTGGAGATGAGGTAGGGGTCGGGAGAGTAGCGGGCGACAAGGGTTTTGGCGAAGAGGTCGTGGGCGAGGCGGGAGAGGACCATGGCGACGGCGTAGTCAAAGGGTAGGAAGAGATTGGAGAGGGTGATGTGGGACTTGATCTTGTCGACGACAATTGTGAAGACGGGGTAAGAGAGGCGGTAGAGGGAGCGCCAATGGACGTGTCAAATTCCACGTACAAGGGTTTGAGAATGCCACGTTTCAAAAACTGGCCACGTCAAACGTCCCACCTCATAAAAAACTTAACTTCATTAAGCCAATTTAACGGCAAGAGCTCAATTGACTCATATTTTCATTTTTTAGGACTAAATTGAAGAATCCAATAAAATTGGAATCTAACTGTGAAAACTCAACATAAATAAAGTCTATATTAAAAGGGTTTAACCTAAAATAATCAAATATACCTCACTTAAAAAAAATGTATGTATGATCTTACGTTTATAATTAGAATTTTTTTTTTTAATTTTAAAACATAATTGAGAGTAAAATAGGAATCCCAAATATGTTTTACTTTTATATATTTTTCTAATCTTAAATAAAATGAAAGATAAGATAAGAATGTAAAATATGTATAGTAAAGAAAGAATTGCTTTATATATTGATATAAAGATTATAACAACTAAAACATTATAAATTTGTTTATATATATTAGTTTTTTATATGATATTCGATAAATTTAAATTTATGATTATTTTTATGATATAAACTACTTCTATGTTATTTTCAAAAATTAAGAGAAATGTTCCAAATGCATTTTATAAAAATTGTTCAAAGTTTTAATGTGAGAAATATTTAAAAGAAGGAGTAAGTTTGTTCAAACTTATACATGAAAAACCCAAACAACATAATTATAAAACAGGTCACCTAGGCAAATCTGATTTACTTTTCTTAGATTATTTGTACTTAAGGAAAACAAATGTGCAATAAAAAGAGTCACATAAATATAAAAATCGTAACTAAGTGTGACATATTTAATTTTGAAATAAAAAATTGTGGCACTAGAAGAATCCAAAAGTTTGTGTTTTTTGTAAGGAATTTTTAATATCACACATGGATATGAAAATCATTCAAAATAAAAGCAGTACGACTAATCTTTTCAAGTATTAAATTGTTGATGTGTTGAAACTGTTGGAAAGATGAAATTAAAAACAGACTAAAAAAAGATAAATTTATAAATAAATAAAAAACGAAAAGAGAGATAAGAAAGTGATGGATGGGGAAGGGGCAAAATGGTAAGTTGGAAAGGTTTTTTGTCTAGGCTTCCCTGATCTCAGAAGCAGAGCAAGGCTCCCAATATAACCCCATCAAAGTTCCCCACCACAGAGAAGAATCTCTCTTTATTTCTTTCACTCTCACACAACCAAAATTTTCCAAACTCTCTCAACTTCATCATCTCTGTCTCTCTCTCTCTCCACCATTTCTGCACTTCAATTTATTCACCTCTGACACCATCTTAATTCTGCTTCCAGTTCATCTCACTCATGGCTATGATCTCTCCTCACTCCCACAATTCCCACATTATGCTCCTCCTCATCACCTGCTTCTTTCGTCATAAATTCTAGATCAAACTGCACACCCTCATCTTTTCTTTTACTGCATATGGCTTATCTTTCAACTCAAATCAATTTCACCACCCTTTAATCTAACAACTACCACACACTCCCACCCCTCAAAACTCCTCTTCCCA


Gene Sequence:
>Vu_14975(+)
ATGGCGGGTGGCAAGCTTCATGCTGCTTCAACCATGTCGCTTCTCCTCCAAAACGAAAGGCTCCCTTGCTCCTCGGAAGTCCTTGAATCTCTTTGGGCTCACACCTCTAACCCTGCTTCCTTCCAAGGTGATCTCTTCCTTCTCAATCGTGCCCTTTCTGCTACTTCCCTTCCTCATCAATTACTTTTCACTCGCATAGATACATGTCGAGCTTTTTGAAATCGGTCCAAGAACACAACACCATCGAGGTTTTTCTGGTTTCCGTGACTTCTGCACAACCACAATTGCAGATGAATTAGTCTGCAATTTTCTGCATGGATTATGACCGCAGCTTAAAACCTTTGTTATATGTATATGCAGAAAATAAATTAAAAACAAAAAAGAAAAAACTCGTTAGCGTTCTTGTTTTTGTGGGAAACTTGAAAGGTGGTTTCTTTCAGTTCAGGACTGTTGGTCTTTGAAGATGTTTGGAAGTGTTATTTTTTTTTTTGTGGAAGCTGTTTATGATTGAAATTTAACACGGTTGTTTGTTACTGATGTTGTTGTCGTTGTTTGTGTTTGGTGGTTGGTTTCAGGTTCAAAATCTATGGTTGATTTTGAGAATGTTAGTGGCGGCAGGGTGACGGACAGGCCGTTTTTTCAAGCGTTGGAGAAGGAAGAGAACTGTGATGATGATTATGAGGGGTGCTTCCATCAACCGGGTAAGAAAAGGAGACTGACAAGCGAACAAGTTCAGTTCCTTGAAAGGAACTTTGAGGTGGAGAACAAGCTTGAACCTGAAAGGAAGGTCCAACTTGCAAAGGAGCTTGGGTTGCAGCCAAGGCAAGTGGCTATATGGTTCCAAAACCGAAGGGCAAGGTTCAAGACGAAGCAGCTAGAAAAAGATTATGGCACATTGAAAGCTAGTTATGACAGACTCAAAGGTGACTATGAAAGTCTTGTTCAAGAGAATGACAAGTTAAAAGCAGAGGTAAAAGAAATAAGAAAAGAGAGACACAAAACAACGCACACACATACATACATGCTCCCAATTTAGCTTTTGTGCTTTATGCTACTACTTGCTTTTAATAAAGTGCAATGTTTATCCCACTAATGGGTTAATGATTGGATTGGCACAATTTTGTTACTAACAGGTGAATTCTCTGGAGAGCAAATTGATTCTTAGAGATAAAGAGAAGGAGAATTCGGACGACAAGTCATCTCCTGATGCTGTCAATTCACCCCACCAAGAGCCTATGGATTTAATTTCAAATTCAACATCTGAAAATGGGACCAAAGTGTCACTCCCTATTATGGTAACATGCAAGCAAGAAGATGCCAATTCAGCCAAAAGTGATGTGCTTGATTCGGACAGCCCACATTGCACTGATGGGAACCATCCCTCTTCATTCGTGGAGCCTGCTGATTCCTCCCATGCTTTTGAACCAGACCACTCAGACTTTTCTCAAGATGAAGAGGATAACCTCAGTGAAAGCCTTTTGACCCTCCCTTGCTTACCAAAGGTTGAAGAAGCCTGCTATGATGACCCTCCTGAAAACACTTGTAATTTTGGCTTCCATGTTGAGGATCAAACCTTCTGTTTCTGGCCCTATTGA