Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14931 LG3 54848481 54850550 PREDICTED: homeobox-leucine zipper protein ATHB-13-like isoform X2
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Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/T 54848971 synonymous_variant p.Thr174Thr
G/T 54848975 missense_variant p.Pro173Gln
C/A 54849078 intron_variant
A/T 54849455 intron_variant
C/*,T 54849528 intron_variant
T/C 54849786 missense_variant p.Ile119Val
C/T 54849838 synonymous_variant p.Glu101Glu
T/A 54849906 missense_variant p.Arg79Trp
T/C 54849928 synonymous_variant p.Ser71Ser
G/A 54849956 missense_variant p.Ala62Val
C/A 54849997 missense_variant p.Met48Ile
A/T 54850002 missense_variant p.Ser47Thr
A/T 54850017 missense_variant p.Phe42Ile
C/T 54850093 intron_variant
T/C 54850288 5_prime_UTR_premature_start_codon_gain_variant
C/T 54850335 5_prime_UTR_variant
C/G 54850345 5_prime_UTR_variant
A/G 54850540 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14931.1
MAFFPANFMLQTPHHDDHQPPPSLTSILPACTPQEYHGGVTFLGKRSMSFSSGIEHGEEANAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKSDNDSLQTQNQKLQAEILALKSREPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHQPSRTLFPSSARPAGVAQLFQTSSRPDLPCQKIDQMVKEESLSNMFCAMDDQSGFWPWLEQQHFN*


CDS Sequence:
>Vu_14931.1
ATGGCTTTCTTCCCAGCAAATTTCATGCTCCAAACCCCTCACCATGATGATCATCAACCTCCACCTTCGCTCACGTCAATTCTACCCGCCTGCACACCTCAAGAATATCATGGGGGAGTGACCTTTCTGGGTAAGAGATCCATGTCATTTTCATCAGGAATTGAGCACGGAGAAGAGGCCAATGCTGAGGAAGATTTGTCCGATGATGGATCACAGGCAGGGGAGAAGAAGAGGAGGCTTAACATGGAACAGGTGAAGACACTTGAGAAGAGCTTTGAGTTGGGTAATAAGCTTGAGCCAGAGAGGAAAATGCAACTTGCAAGAGCTCTTGGCTTGCAGCCAAGACAAATTGCTATATGGTTCCAGAACAGAAGGGCAAGGTGGAAGACCAAGCAGTTGGAGAAAGACTACGATCTTCTCAAAAGACAGTATGAAGCCGTCAAGTCAGATAATGATTCGCTTCAAACTCAGAACCAAAAACTTCAGGCTGAGATATTGGCACTGAAAAGTAGAGAGCCAACTGAATCCATCAACCTTAACAAAGAAACAGAAGGATCCTGCAGCAACAGAAGTGAGAACAGCTCAGACATCAAGTTGGATATCTCAAGGACACCAGCTATTGACAGTCCTCTCTCTACACATCAGCCGAGCAGAACCCTGTTTCCATCTTCTGCTAGGCCTGCAGGAGTTGCTCAGCTTTTCCAAACTTCTTCAAGACCAGACCTTCCATGCCAAAAGATTGACCAAATGGTCAAAGAAGAAAGCCTAAGCAACATGTTCTGTGCCATGGATGATCAATCCGGGTTTTGGCCATGGTTGGAGCAGCAGCATTTCAATTGA


Promoter Sequence:
>Vu_14931::LG3:54850550-54852550(-)
AAACTCACTCTTAGATTCCTAACAACTTATTCAATCATGTATTACTTTTCTATATTATGTTTAGAATACTCGTTTATATACATATGTATGAATTGGATATTTACATTTTTATATAAATATGAATTTGTCATTTCTTTTAATCAAGTATAAGAATTTGTTGTAATCCAAAATAGATCAGCATCACAGTAAGCATCAATCAGCATTTACAGCATTCTTAACACAGTCAAACATACATAAAAATAAAATAATGGAGTCAATTTTCACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTGTGTGTATGTATCTATATGTATATTAATGTGTACAGGGTATGTACTGGAGGGCCATATGAAAGGAGGCAGTGGATAAGGCGAGGTGAGAGGAATGTGGTGATAATATATTTATATTATTAAACAGAGTGAATCCACTTTTTGACCAAAAGGTTTATTGATATTTTGATTATATTGGATGGCATGAATGAGGTTTATATTTTTGTGTGTTGTGTTTGATTGTCTAAGGAGATGAGGAACTAAAGTGGTTAACGGGTAGAAATTGACGAAGAAGCATGGGGTGGTTAACTTTTGAGGAAGAGTTGTGTTTTGATGAAATAGTGATAAGATATAATAAAGTTGTAGAAAGAGTAGACGAGGGACGTGAATTTATTGAAAAAGTTGTTAAAAAAACATTTTCCAAAAATAAAATGGTTGGAAGAACAGAGGTGACGTAAGTGTAGATTGGCACTTGAGTGTCATGGCTCATTTTATGCATTAGAAAAATGGGTAGGAAAAGGACAAAGAAGAGGAGCTCGGGTAGGGTAGGAAGAGCAGGAAAATATTTTCACTCTGGGTGGAATATGTACTCTTTTGATGAAAAGCATAGCACTGATTTCTTGCTGGAAATGATTTGGAAATAAAAAAAAATGTAAAAAAGAAAAGAAGTTGTTAGCTGGTAATGGAAATTGCATGAAAGAAGAGGCATAATAGGTTGTGTTTGAATAGAGTTGAATTGAAGTGGATGACATAGGTGAAAAGAGAGATAGGGGTGGAAGTGACGCAAAGGATAATGGGTGATGCGAAAGAGCTTCGTCCTAATACACGATACCTGTTGGTGGGTTAGGTAGCAAACCCTGCCCCTCCTCATTGGACCCATCCCCTAGATTCCTGCCCTTTCTCCCTTTCCTTTTCTCTCTCTCTCACACAAAAAACACAATCCATTTTGGACATAAAGTTATAGCCAACTCACTTCTCTTTTTTCTTAAGTAACCTCTTCCCTTCACAAAATTTAACACAACTTACAAATATCACCTCACCATGTAAAGTTTCTTTTCCCTCTCAGTCACAACACTTTCCTCATCCTATGTCTTTTCTTTATCACCTTTTATTAATCTAATCATCGTCTCCATTTCCCACTTCCATTAAACAATAACTTAATCATATCTCAATCTCTACCTCCAATGCCAATTTCCCAATTCCATCATTATGTTTTGTGAAAAAACAACCCCCTCTTCTTGTCTCCTGAGTCAGAAACTAGTTTATCATTTGCAAAATAATTACATTTTAAGACCTTACTTACATTACATTGGAATAACAGTACTCAACAAGTTCAGCCAGAGAACCAAGTTTTCCTTTCTCATCACTATTTTTTTCTTTATTCTTTTCTCATCTACACCAAACATCCTTTCACATTTAATATACTTCATCTTTTTCCCCCACAAATGCTTAACTAATTGTTTTTCCTTTTTCATCTACACATTAAATTGGAGTTCTTTATACCAATAGTTTACTAGCAAAATCAAATGAAATAAAAATAAAAACCCTCTGATATATTTGGAAGTTAATGTGTAGAACTATATAGTCTATAGATTCAAACATCTCTCTCTACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTTTCTGTGTCTCTCCC


Gene Sequence:
>Vu_14931(-)
CTCCTCCCTCTTCCCTCTCCCTCCTAACCCCATTTCCTTTCAAATAGTAGCACTAGAGAACAAAAACTCTAGCTAGCACTGATAATGTATATACAAGCCATCATTCGGAAGAATTAGTCCATTCTCTTTCAAGTGAAGAACTTGTTTAGTTTGCTCCAAAAAATATTGTCAGAGGATGTGGTGCAGTAATCCTTTGTCATTTCTTGTTTAACCTTGTATCATATGCAATCTTCTCTTATTCTATCAGAGTGGCGATCACACTATCTATCATTCAGCTGATCTTCAAGATTTTGTGGCAGGCCTAAAACCTGCAATGAGATGGCTTTCTTCCCAGCAAATTTCATGCTCCAAACCCCTCACCATGATGATCATCAACCTCCACCTTCGCTCACGTCAATTCTACCCGCCTGCACACCTCAAGAATATCATGGTACACTCTCTCTATCACTAACAATCAGACAAACACAAGCACACACACTCAAATATCATGTTTCTGATATCCTGTTCTGAATGTTGATGCAGGGGGAGTGACCTTTCTGGGTAAGAGATCCATGTCATTTTCATCAGGAATTGAGCACGGAGAAGAGGCCAATGCTGAGGAAGATTTGTCCGATGATGGATCACAGGCAGGGGAGAAGAAGAGGAGGCTTAACATGGAACAGGTGAAGACACTTGAGAAGAGCTTTGAGTTGGGTAATAAGCTTGAGCCAGAGAGGAAAATGCAACTTGCAAGAGCTCTTGGCTTGCAGCCAAGACAAATTGCTATATGGTTCCAGAACAGAAGGGCAAGGTGGAAGACCAAGCAGTTGGAGAAAGACTACGATCTTCTCAAAAGACAGTATGAAGCCGTCAAGTCAGATAATGATTCGCTTCAAACTCAGAACCAAAAACTTCAGGCTGAGGTTAATAGTTACCTTCTAACTCAATCAAATTCCAATCATTTAGTTCTGTAGCAGTGTAGTCTCCTTCCTTCCTGTTTACTTTCACATCATCTTTTGCTTTTCAACTTTTCTTTTCCTTGAGGAAAAGTGAAAACTACAATAAAAGATGAAGCCTCTTTTGACATGTTGAATTTCTTCTTTCTGAGACTATTTTTGATGAGATTGTTTTGATTCTGTGGAATAAAGCTTTGTGGTAGTAATGATGATCCTTTTTCATTTCACAAGTGTTTATGTTTTTTTGACTAGTGTATAGTTTTCAGAACCGTTCCTTTCACCTCTTCTCTTACTAGTGACTTTCTATAAAGTTGTTTCTTTTTTCCTTTCATCTACAGTGACTGGTTCAAGATTCAATGATCCATCTTCTCTCCATTGACATCTTCCATTCTCTCTCTTGCACACTTCTTCACTGGTTAAGCTTTTTCATTTTTCATCATACCATATTCTAGTTTCCAGAGGTTTAACAAAATTGTTTTTATTTGAAGGCGCAGGGGTGGTGTTGGTGTTGGTGTTGGTGTTGGTGTTGGTGTTTTAGCCTTTTAGGTCCAACTCTTGTGCATGCATATTGTTTGTTGTATCGTCTTATTGGATTAGGTAATTTTTGTGGTGCAGATATTGGCACTGAAAAGTAGAGAGCCAACTGAATCCATCAACCTTAACAAAGAAACAGAAGGATCCTGCAGCAACAGAAGTGAGAACAGCTCAGACATCAAGTTGGATATCTCAAGGACACCAGCTATTGACAGTCCTCTCTCTACACATCAGCCGAGCAGAACCCTGTTTCCATCTTCTGCTAGGCCTGCAGGAGTTGCTCAGCTTTTCCAAACTTCTTCAAGACCAGACCTTCCATGCCAAAAGATTGACCAAATGGTCAAAGAAGAAAGCCTAAGCAACATGTTCTGTGCCATGGATGATCAATCCGGGTTTTGGCCATGGTTGGAGCAGCAGCATTTCAATTGAAACAAAGGAAGAGTTAATTAATTTAAAATTTCAATGTACTACTTTTTCCCTGTGAAATCAAGAGGGTCTTCATCCATCAATTACCACACTTGATTATGAGTTCTTTAAATTAAAACCCATGTTTTGAAACTTGGTGTATAAAATAGAATTAATATATCAAGTAGAAATTTTC