Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14878 LG3 53763881 53765721 PREDICTED: myb-related protein Hv33-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
T/C 53763898 synonymous_variant p.Cys6Cys
G/T 53764290 missense_variant p.Arg137Ile
T/A 53764557 intron_variant
T/G 53764558 intron_variant
A/G 53764624 stop_lost p.Ter188Trpext*?
G/T 53765549 synonymous_variant p.Thr398Thr
T/A 53765566 missense_variant p.Phe404Tyr
C/T 53765588 synonymous_variant p.Ile411Ile
A/G 53765592 missense_variant p.Lys413Glu
G/A 53765652 missense_variant p.Gly433Ser
C/T 53765665 missense_variant p.Pro437Leu
C/T 53765680 missense_variant p.Ser442Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14878.1
MASSKCCMISSQQNQNAPTCYPFPSSPSMGMVCADMMGSLSLATVSNALSSQESFGYGHHHGHASGVENGRSTSWSFPFMREFLSSNFEDCSDVGAGESNSNEKTNNNGKFSEESNPNENLLSGKEVDSGHSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRMSQSVYKRVEQNPIFCSRDNASTTEQEPSPSYCLNLLHNGVGVTNNLASFPSFHGVGSGEVVDFGLNASLQNMNGVREAMSNTLQVGLRAQAQQAPFDFFSGGGSNDMTGESNGQIRSWERSNESVQSGLYPHYPQQYLRAMQQLENNTRNNFYSFLNSSSASASTGKEASSSSACVAGMRDKVVNSDPPDGVPPPFFDFLGVGAT*


CDS Sequence:
>Vu_14878.1
ATGGCCAGCAGCAAGTGTTGCATGATCTCTTCACAACAAAACCAGAATGCCCCCACATGTTACCCTTTTCCATCTTCTCCTTCAATGGGAATGGTCTGTGCAGACATGATGGGGTCTCTCTCTCTTGCTACTGTTTCAAATGCTCTTTCATCTCAAGAAAGCTTTGGTTATGGCCATCATCATGGTCATGCTTCTGGGGTGGAAAATGGAAGGAGCACAAGCTGGAGTTTTCCCTTCATGAGGGAGTTCCTCTCCTCAAACTTTGAAGACTGTAGTGATGTTGGGGCTGGGGAGAGTAACAGTAATGAGAAAACAAACAACAATGGCAAGTTTAGTGAAGAAAGTAACCCTAACGAGAACCTTCTCAGTGGCAAAGAGGTAGATAGTGGACACTCTAAACTTTGTGCAAGAGGGCATTGGAGGCCTGCAGAAGATTCCAAGCTCAAGGAGCTCGTGGCTCTTTATGGCCCTCAGAATTGGAACCTCATAGCTGAAAAGCTAGAAGGAAGATCAGGGAAGAGCTGTAGGCTGAGGTGGTTCAACCAGTTAGATCCAAGGATCAATAGAAGAGCTTTCAGTGAAGAGGAGGAAGAGAGGCTAATGCAGGCACATAGAATTTATGGCAACAAATGGGCCATGATTGCTAGGCTTTTCCCTGGGAGAACAGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCCAGGAAGTACAGGGAACAGTCCAGTGCCTACAGGAGGAGGAGAATGAGCCAATCTGTTTACAAAAGGGTGGAGCAAAATCCAATCTTTTGCAGCAGGGACAATGCCTCAACCACGGAACAAGAACCATCGCCTTCTTATTGTCTCAATCTCCTCCACAACGGAGTAGGAGTCACAAATAACCTGGCTAGTTTCCCATCCTTCCATGGAGTAGGTTCTGGTGAGGTTGTTGATTTTGGCTTAAATGCTTCTCTACAAAACATGAATGGTGTGAGAGAAGCAATGTCAAACACCCTACAAGTTGGCCTGCGTGCTCAAGCTCAACAAGCACCATTTGATTTCTTCTCCGGTGGTGGAAGCAATGACATGACGGGAGAGTCTAACGGGCAGATCAGAAGCTGGGAGAGGAGCAATGAATCTGTTCAATCTGGTTTATACCCTCATTATCCCCAACAATATTTGAGGGCAATGCAACAGCTAGAGAACAACACACGCAACAATTTTTACAGTTTCTTGAATTCCTCATCGGCATCAGCAAGCACAGGGAAGGAAGCATCATCATCATCAGCATGTGTTGCAGGAATGAGAGATAAAGTGGTGAATAGTGACCCCCCAGATGGTGTTCCACCCCCATTTTTTGACTTCCTTGGAGTAGGAGCCACATGA


Promoter Sequence:
>Vu_14878::LG3:53761881-53763881(+)
CCAACGACCTATCTTGTGTTTGATTTTTGGGAGAAATATGAAAGTTAGGATAAAAAATGTTTGAAGTAAAAATGAGAAGGTTTTGTGAAAGGTGCATGTAATGGAAGTCGTGCAATATATACATAGATTACAGTGGTAAATGGTGATGTGATGGGAAGAGAGAGAGAGAGTGATAGTAGTAGAAACTAGAAAGACTAGAAGTATGTTATACTAGCACTACTACTCCTAGCTGAATGCATGAATAGGGTAGCTATGTTATAGGGTGTACATGAAAGATGTCAGGTTCTGTAGTTGTGTTTCGATGGAAATTCACAAAATATAATAAAATTTTCATTTCATTTGATTTGTGGTTTGAAAAGAAAGGTGTCTGTGGTGGTGCACAGCCACGACCACCACCACGTTCAACCCTCTTTTCTTTTTGTCAAATTAGAGAGAGACAGCCTTAGACTCTGCAACCCCATGAATGGAGAGAGAAAGATAGTCACACGTGTGAGTGAGTAAGCTGATTCCAGAGAATGATTATGGTAATAGTATAATGACAGTATCTCATCTCATCTGACTTAGGAGAAGAGTAATAGTTAACAGATAAATAATATAATAATACTACTATATAATGTTTTTTCCACATTTGTCAGAGGGATAAAACCTACCCTTGCCACTTCACTCTCATAATATTTATTTTCTAAACTTGGATCAAACTTTAATAATTAAGATTGTTTTTCTTTTTATACCTGGTATTGATTTGAGTTAAATATGATTTTTAAACTTAAATGTGGAATAGAAATTAATTTTTATTCTAAATTTTTATATAATTTAAATTTTAAATTTTATAAATAAATTATGATGAATCTAAATGCGTTATAATTTTTTTATAAGTTAAATGCTTTTTCATATATGACTTTTTATATAATATTTGAGTTGATTTTATGTCATTTAATATGTTTTAATTTAAATGTCAATTTGAATTATCATTTAATTAAAAAGAAATTTAATATTTTTGAATTAAAAAGCTATATTTGTTTAGTTTTAGAATTTAAAATTTAAAATATATTAAAATTTGATATGAATAAATTATTATTTATATTCTAGGTAGTGAATTTTATTGTATATGTTATTTAGATAAACTAATGAAATTTCATTCTATTGAATATAGGAAAATGACACTTGAACAACCATTTTTGACAACATTTAGACACGCGCACACGTGTCAAAATCTGAGTGGTCCAGTTGAAAAAATTAAATGAAAATGGACCACTCAGATTTTGACACGTGTGCGCGTGTCTAAATGTTGTCAAGAATGGTTGTTCAAGTATCATTTTCCTTGAATATAACAAGTTAAAAAGTTGTTGTGAATAATGTTGAGGGACGTTGATAAAAGTTTCCAACGTTTAATTTTCAACAATTTCTTGAATAAAATTATTTTCAAAATATATTTTTTGTTAAAACTACTGCATCACAATTTTATATTGTTATAATGATGTATTGCGTGATAATGAAAAGCTTTTTAACTCAAGTAAAACTAATTTTTACTTGCAAGAGAAATTTATTTTACTTTCTATTTCGATTTTATAAATAAGTCTATTCAGACCATTTGTTTTTCTTTGTTCGTATCTGTAAAATAACTATAAATACAATTTATCTTTCGAAGTTCACTTTCTGCCGGCCCACGTCCCAAAAATGTACTAATGGTAAAACAAATAATAATAAATAAAAAAAAACAAATGATCTTTTCAAGTTTGCACATCTTAGAAATGCGTGAAATTTTCACATTTGGTGAAAAAAAAAACACTTGAGACTTTACACCAGTGGTGGTATCCAAGTCCCTTTGCCTCGCTGAAAAATCTTTTCCGCTTCAACTTCCTCATGCTACACTGTTTCCAGCATAACACAAAAACATTGTTGGTCGCATGAGCGCTGAGGAATGGTAACAGTTGCAAACCCAACATCATCAACAACAAGAACAACAAACATTTGCGTCACGAAATTATGAAATGAAGTCA


Gene Sequence:
>Vu_14878(+)
ATGGCCAGCAGCAAGTGTTGCATGATCTCTTCACAACAAAACCAGAATGCCCCCACATGTTACCCTTTTCCATCTTCTCCTTCAATGGGAATGGTCTGTGCAGACATGATGGGGTCTCTCTCTCTTGCTACTGTTTCAAATGCTCTTTCATCTCAAGAAAGCTTTGGTTATGGCCATCATCATGGTCATGCTTCTGGGGTGGAAAATGGAAGGAGCACAAGCTGGAGTTTTCCCTTCATGAGGGAGTTCCTCTCCTCAAACTTTGAAGACTGTAGTGATGTTGGGGCTGGGGAGAGTAACAGTAATGAGAAAACAAACAACAATGGCAAGTTTAGTGAAGAAAGTAACCCTAACGAGAACCTTCTCAGTGGCAAAGAGGTAGATAGTGGACACTCTAAACTTTGTGCAAGAGGGCATTGGAGGCCTGCAGAAGATTCCAAGCTCAAGGAGCTCGTGGCTCTTTATGGCCCTCAGAATTGGAACCTCATAGCTGAAAAGCTAGAAGGAAGATCAGGTGTGGAAGAAAACAATTCCAAAGTGCAAAATGATAGCCAATTAACACAAGTTATATTATTTCTCTCATGTTGTGGGTGTATTGTATGAAAGAGAGGAACATACATTGTTGGCATTTTCTTGTCTTTTGTCAAATTCCCTTCATTTCCTTTGATGTGATTTGTTTTGTATTTGAATTAGGGAAGAGCTGTAGGCTGAGGTGGTTCAACCAGTTAGATCCAAGGATCAATAGAAGAGCTTTCAGTGAAGAGGAGGAAGAGAGGCTAATGCAGGCACATAGAATTTATGGCAACAAATGGGCCATGATTGCTAGGCTTTTCCCTGGGAGAACAGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCCAGGAAGTACAGGGAACAGTCCAGTGCCTACAGGAGGAGGAGAATGAGCCAATCTGTTTACAAAAGGGTGGAGCAAAATCCAATCTTTTGCAGCAGGGACAATGCCTCAACCACGGAACAAGAACCATCGCCTTCTTATTGTCTCAATCTCCTCCACAACGGAGTAGGAGTCACAAATAACCTGGCTAGTTTCCCATCCTTCCATGGAGTAGGTTCTGGTGAGGTTGTTGATTTTGGCTTAAATGCTTCTCTACAAAACATGAATGGTGTGAGAGAAGCAATGTCAAACACCCTACAAGTTGGCCTGCGTGCTCAAGCTCAACAAGCACCATTTGATTTCTTCTCCGGTGAATCCTTTCTCTCCTTCGTTGTTCCCTCTAATTAAAACCATCTTGTTCCTTTAAACAGCTGCTGTGCAGGTCTTTCACATTCTTGCTGCATCATCCAAGTTTCGTTAATTACCAAGCTTTAGCTTGCTCTTAAATTTTCTCTTTTGTTCCAAACAAGTTTAATCAAACAATGTTTTGTTTTCATAATTTCATCAACCTTTTGGGTATGTAAAATTGACTAATGCAAGTAAAACTTTTCCCACAGACTTCAATGCTATTAACTGACTTTTTCAAGTGGGTTGGGTTTGCAAGGTGGTGGAAGCAATGACATGACGGGAGAGTCTAACGGGCAGATCAGAAGCTGGGAGAGGAGCAATGAATCTGTTCAATCTGGTTTATACCCTCATTATCCCCAACAATATTTGAGGGCAATGCAACAGCTAGAGAACAACACACGCAACAATTTTTACAGTTTCTTGAATTCCTCATCGGCATCAGCAAGCACAGGGAAGGAAGCATCATCATCATCAGCATGTGTTGCAGGAATGAGAGATAAAGTGGTGAATAGTGACCCCCCAGATGGTGTTCCACCCCCATTTTTTGACTTCCTTGGAGTAGGAGCCACATGA