Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14866 LG3 53539548 53544007 proline-rich receptor-like protein kinase PERK9
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 53539590 3_prime_UTR_variant
C/T 53539622 3_prime_UTR_variant
A/G 53539623 3_prime_UTR_variant
A/T 53539726 3_prime_UTR_variant
C/T 53539739 3_prime_UTR_variant
C/A 53539790 3_prime_UTR_variant
G/A 53539996 3_prime_UTR_variant
C/A 53540150 stop_gained p.Glu698*
C/T 53540474 missense_variant p.Arg625Gln
A/G 53540602 intron_variant
T/C 53541276 intron_variant
G/T 53541525 synonymous_variant p.Arg528Arg
C/A 53542048 stop_gained p.Glu447*
C/A 53542050 missense_variant p.Gly446Val
C/T 53542057 missense_variant p.Gly444Ser
T/A 53542058 synonymous_variant p.Gly443Gly
A/T 53542064 synonymous_variant p.Ile441Ile
T/C 53542066 missense_variant p.Ile441Val
G/T 53542910 missense_variant p.Pro187Gln
G/T 53542964 missense_variant p.Pro169Gln
G/T 53543013 missense_variant p.Pro153Thr
C/T 53543082 missense_variant p.Ala130Thr
C/A 53543446 synonymous_variant p.Ala8Ala
A/G 53543451 missense_variant p.Ser7Pro
T/A 53543544 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14866.1
MSAASPSAAASPPPQTPPSSNTSPSPSNATTPPLQQTPSSTSPPQQAESPPPLTPSPAAPPPAPPSPPPSSSPPPVSGTPPPSVTPSSPPPSSPQPSPPPPPPPSVPPSSSPPSSPQPSPPPPPSPDAPAPVPPSSPPPPPPSAPVPSRSPPPPPPPSNPPNSSSPLPPPQPSPSAPPPNNTQTPPPHRNSPPPPATTLPPASPPRNSPSPPASPPPRNSTRSSPPPPAARSSPPPAPEPSNPPSRSSPPPTPSSSLAPPSNSTPSSSPPLVTQLTPPPPSPSKVSSPPSPTPNPTADAGSPGGSISTVGVVAIGVVAGFLLLGFIGVLIWCMRRQKRKTPVNGGYVMPSTLASSPESDSSFFKTHSSAPLVQSGSGSDVVYTPSDPGGLGHSRSWFSYEELMKATNGFSSQNLLGEGGFGCVYKGHLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIEDSRRLLVYDYVPNNNLYFHLHGENQPVLEWANRVKIAAGAARGLAYLHEDCNPRIIHRDIKSSNILLDFNYEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPLGDESLVEWARPLLSHSIDTEEFSSLADPRLEKNYIESELYCMIEVAAACVRHSASKRPRMGQVVRAFDSLGGSDLTNGMQLGESEVFDSAQQSEEIRLFRRMAFGSQNYSTDFFSRASLNP*


CDS Sequence:
>Vu_14866.1
ATGTCGGCAGCGTCGCCGTCAGCGGCGGCATCTCCACCACCACAAACACCACCCTCCTCCAACACTAGTCCCTCACCGTCCAACGCCACCACTCCTCCGCTGCAACAAACCCCTTCTTCCACTTCTCCGCCACAACAAGCAGAATCTCCGCCTCCGCTAACCCCATCTCCGGCGGCTCCGCCGCCTGCTCCGCCGTCACCACCACCTAGTTCTTCACCTCCCCCAGTGTCTGGAACACCTCCTCCATCAGTCACTCCATCATCACCACCTCCATCTTCGCCGCAGCCATCTCCTCCACCGCCACCCCCTCCATCAGTCCCTCCATCATCATCACCGCCATCTTCGCCGCAGCCATCTCCTCCACCGCCGCCTTCTCCTGATGCACCGGCACCGGTGCCACCGAGCTCTCCACCGCCACCACCACCATCAGCACCAGTGCCATCAAGAAGCCCTCCGCCACCGCCACCACCATCAAACCCTCCTAATAGCTCATCTCCACTACCACCGCCACAACCCTCACCATCAGCTCCCCCACCTAACAACACCCAAACACCGCCGCCGCACCGAAATTCACCACCACCTCCGGCCACCACGTTGCCACCAGCCTCGCCACCACGAAATTCACCATCTCCTCCGGCTTCACCGCCCCCTAGAAACTCAACTAGGTCATCACCGCCGCCTCCGGCAGCGAGGTCATCGCCGCCTCCAGCACCTGAGCCATCCAACCCACCTTCTAGGAGTAGTCCTCCTCCCACACCAAGTTCGTCCCTAGCTCCCCCTTCAAATTCTACGCCAAGTTCATCACCACCTTTAGTTACTCAATTGACCCCGCCACCGCCATCCCCGTCAAAAGTTTCATCGCCCCCATCCCCTACTCCGAACCCGACAGCAGATGCAGGCTCTCCTGGAGGTAGTATCAGCACTGTTGGTGTAGTAGCTATTGGTGTGGTAGCTGGATTTCTGCTTCTTGGCTTCATTGGTGTTCTTATATGGTGCATGAGAAGGCAAAAGAGAAAGACTCCTGTGAATGGTGGTTATGTCATGCCATCCACTCTTGCCTCCTCTCCTGAATCAGATTCATCGTTTTTTAAGACACACTCTTCAGCTCCTCTTGTGCAAAGTGGCTCTGGCAGTGATGTTGTGTACACACCATCTGATCCTGGTGGACTAGGCCACTCAAGGTCATGGTTTTCATATGAAGAACTGATGAAGGCCACAAATGGTTTCTCAAGTCAAAATCTTTTGGGTGAGGGAGGATTTGGTTGTGTGTATAAAGGGCACCTTCCTGATGGAAGAGAGATAGCAGTGAAACAACTGAAGATTGGTGGAGGTCAGGGAGAGAGAGAATTCAAAGCTGAAGTGGAAATTATCAGTCGTATACATCATCGCCATTTGGTTTCTTTAGTGGGATACTGCATTGAAGACAGCAGAAGACTACTTGTCTATGACTACGTTCCTAACAATAACCTTTACTTTCATCTACATGGGGAAAACCAGCCTGTGCTAGAATGGGCAAACCGTGTCAAAATTGCAGCTGGTGCAGCCCGTGGACTAGCTTATCTCCATGAAGACTGCAACCCTCGGATCATTCACAGGGATATCAAGTCGTCAAACATTCTTTTAGATTTCAATTATGAAGCTAAGGTCTCAGATTTTGGGCTAGCCAAATTAGCTCTTGATGCAAATACGCATATTACCACGCGTGTCATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCTTCAAGTGGTAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTCGTGCTTTTGGAGCTAATTACCGGCCGGAAGCCGGTAGATGTATCCCAACCTTTGGGAGATGAAAGCCTGGTTGAATGGGCTCGGCCTTTACTAAGTCATTCAATTGATACTGAGGAATTCAGTAGTTTGGCAGATCCAAGGCTAGAAAAGAATTACATTGAGAGTGAATTGTATTGCATGATTGAGGTTGCTGCAGCTTGTGTGCGGCATTCAGCTTCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGGTTCTGATCTAACTAATGGAATGCAACTTGGGGAAAGTGAGGTGTTTGACTCTGCACAACAATCTGAAGAGATAAGATTATTTCGGAGAATGGCATTTGGTAGTCAAAATTATAGCACAGATTTCTTTAGCCGTGCTAGTTTGAATCCATGA


Promoter Sequence:
>Vu_14866::LG3:53544007-53546007(-)
GTAGCGTAACAGCATTGAGCGAGAAACTCAGCTTGAGAGAGAAAACCCTAGGTGCAAACAACAGCCACCAAAATAGCAAAGCAAGGGCCAAAACACGCTCAGGAAGCTCCGGCGAAACTGTCTGCAGTAGCGCAATGTCGATCTGACACCGAGAAAGCGGCGCATGAGGAACATGCGCCGGAGACTTGCCGGAGAGAAACAACGCGTGGAGGAGCGTGCAGAGGTTTCTGAGGAAGCGACCACCAGGGTTGGGTTGCGCTTCTCGGGGCGAACCTAACCCTTAACTTTGCCTGACAAACAGTGACGACGGACGGCGGTGGCGATAGCAGCGACGACGGCGAAAAGTGACGGCGACAGTAATGGCACACTGGGTCTGGCTCTTGATACCATGTTAGAGAACTAACTGAGACATTTTATTCATTCATTCACTCTAACAAGGTTTTGATATTCTATATATATAGAATACCATGACAGAATACAACCCACCTCTTAAGTTGGGTACATACTCACAAAACAACATAAACTTAATACATTTCAACAGTGTTGATTGAAGTAATTAAAAACATGTTTGATATTTAGTAATTGTAATATATATTTATTAAAACACAAGAAAAATTAATATTGTTATATAATTAATTTTGAAGAAATAATTAAAAAATTTAAATTAAACTAGAAGCGAATCAAACAAATACTAAATATCAAACAAAATTACTAAAATTAAAAATTTGTATACTGAAACTATAATTTTATTTTATTAGATTAAAAATGAAATTTTTTAATATTAGTTATATTAAAATAGTTATTTATCTATTTTTTATCTTTAAATAATAAATAAAAATTTTATTTTTTTAATTAAATGAAATTATAATTGATTAATCAAATAATTTTACTATAATTTGCGGATATAAAAATGAATTGAAATATGTGAGTCAAATTCAATTTATTACACAATATATTTGAGTCGAATTGAATTAAATAAAACATAACATTTTGATACGAATTAAATTTGAATTTGATAACTAAAAATACGATTTACCTAATAAATGGTGAATCGAGTTGACTTAATATAATAAATTGTGGTAAATTCAAATTTTTTATTTATTAATAAGTAAATTAAATGAATTCATTCATTAAATAGTCAATTTTATAATATCCAAATAAATTCATATTAATAATTCGTTTTGATAACACTAACTTCGTACTTATAAACTTTGCAAGTTATATAAAGTTTAGAAAATGAAAAATTATAGACTTTGCAAGTTATGATAAAGTGTAGAAAATGGAAAATAATAGACCTGACCTGACGATTCTATGAACGGCGCCTTTAGGATGCGTGCCCCTTTTTATTTATTGTTTGCTATACTAATATTATAATTTAGTTGGAGCACAATTCTGAATTCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTGAATAACATTTACGTTATTGAAACAAATTAAAATGAAATATGTTTCTTCCAGTAATATATAAATATACAAATAACAGACATTTTGTGTTGTAAAAAAAATAAATTGTTAGTTAAAATAGAATAAGATTTAAATTTTTAAAAATTAATTTTGTGGATATGATAAAAGAAAACAAAGCTTTTTTTATTTTTATTTTTAAGAGAATGAAGCTTTAATCACAAGGACTTTTGGCTCTTTTGTACTTGGCGTGCTGTGAATGGCGAAAAATGATTGAAAATTTTGATTTTGATTTATTTGCTTTGAGGTTGATAATAAAAGAGAATTGGGAGGTAGCATTCTTTTGGAGTCACTGTCACGTGGCTTTTGGATTTGCGACCCCACACCTCAACACAATCTGTGTAACCGTGTTCCTGACCCCATTGAAGCCTAGCCTATGCAGACACGACACACAAAAACACACCCTCAATTCAAACATGTT


Gene Sequence:
>Vu_14866(-)
ATACTAGATTGAAAATTCATTAATGTTTATTGTCTTCTGCTCAGAAGAAGAAAACGCGTTCAGGAGGAAGAAGAGAACATGGGTACTGTTCAAACAAGGCAAAGAAAAGGTATTTGAAGTTTGAGGTCTGAGGTTTGAGGGAGGACCCTTTCCTTCTTCTTTCTCGTAGTGGTGCTTTGGGTGCTCCACTACGTCAACAAAATCTGACAACAACAGAATCTTCATAGATTGTGGGGAACAAAAGTACCATAGATAACCATATTGTTGAAAATTAAAGAAGGAATATTGAGTGTTTTTATTGAGCCAGAAATGTGATGCAGAGATTGGCACTGTTATGTGATCTGGGTTTTCTGCTGTCATAAGATTTTGAGGTGTGACACCTGAGGCATTGGTTTCTTGGTTGGTAAAGTTTGGTGATTATTGCAGTATAACTATCTTCATCCAAAGTTTTCATCTTTGCTTGAGGTCTAAGAATTTCGGTTGTTATTATGGGATCTGAAGTTTAGAGCTTTGCTTTGAGCTGAGATTGACACGTGATATGTCGGCAGCGTCGCCGTCAGCGGCGGCATCTCCACCACCACAAACACCACCCTCCTCCAACACTAGTCCCTCACCGTCCAACGCCACCACTCCTCCGCTGCAACAAACCCCTTCTTCCACTTCTCCGCCACAACAAGCAGAATCTCCGCCTCCGCTAACCCCATCTCCGGCGGCTCCGCCGCCTGCTCCGCCGTCACCACCACCTAGTTCTTCACCTCCCCCAGTGTCTGGAACACCTCCTCCATCAGTCACTCCATCATCACCACCTCCATCTTCGCCGCAGCCATCTCCTCCACCGCCACCCCCTCCATCAGTCCCTCCATCATCATCACCGCCATCTTCGCCGCAGCCATCTCCTCCACCGCCGCCTTCTCCTGATGCACCGGCACCGGTGCCACCGAGCTCTCCACCGCCACCACCACCATCAGCACCAGTGCCATCAAGAAGCCCTCCGCCACCGCCACCACCATCAAACCCTCCTAATAGCTCATCTCCACTACCACCGCCACAACCCTCACCATCAGCTCCCCCACCTAACAACACCCAAACACCGCCGCCGCACCGAAATTCACCACCACCTCCGGCCACCACGTTGCCACCAGCCTCGCCACCACGAAATTCACCATCTCCTCCGGCTTCACCGCCCCCTAGAAACTCAACTAGGTCATCACCGCCGCCTCCGGCAGCGAGGTCATCGCCGCCTCCAGCACCTGAGCCATCCAACCCACCTTCTAGGAGTAGTCCTCCTCCCACACCAAGTTCGTCCCTAGCTCCCCCTTCAAATTCTACGCCAAGTTCATCACCACCTTTAGTTACTCAATTGACCCCGCCACCGCCATCCCCGTCAAAAGTTTCATCGCCCCCATCCCCTACTCCGAACCCGACAGCAGATGCAGGCTCTCCTGGAGGTAGTATCAGCACTGTTGGTGTAGTAGCTATTGGTGTGGTAGCTGGATTTCTGCTTCTTGGCTTCATTGGTGTTCTTATATGGTGCATGAGAAGGCAAAAGAGAAAGACTCCTGTGAATGGTGGTTATGTCATGCCATCCACTCTTGCCTCCTCTCCTGAATCAGGTAAAAATTCGCATCTTTTTTCCGCAGAGAATTTCTGAAAAAGTTTAGCATTTAATTTAATTCAAGTTTGTGACTTTGTGCAGATTCATCGTTTTTTAAGACACACTCTTCAGCTCCTCTTGTGCAAAGTGGCTCTGGCAGTGATGTTGTGTACACACCATCTGATCCTGGTGGACTAGGCCACTCAAGGTCATGGTTTTCATATGAAGAACTGATGAAGGCCACAAATGGTTTCTCAAGTCAAAATCTTTTGGGTGAGGGAGGATTTGGTTGTGTGTATAAAGGGCACCTTCCTGATGGAAGAGAGATAGCAGTGAAACAACTGAAGATTGGTGGAGGTCAGGGAGAGAGAGAATTCAAAGCTGAAGTGGAAATTATCAGTCGTATACATCATCGCCATTTGGTTTCTTTAGTGGGATACTGCATTGAAGACAGCAGAAGACTACTTGTCTATGACTACGTTCCTAACAATAACCTTTACTTTCATCTACATGGTAAAATCCATCTCAGTGATGAAGGGATGATTCAGTTCAGTTTGATTATCTTTGATTGTTGACTGAAATTGTAATCTTCAGGGGAAAACCAGCCTGTGCTAGAATGGGCAAACCGTGTCAAAATTGCAGCTGGTGCAGCCCGTGGACTAGCTTATCTCCATGAAGACTGTAATTATCAATCCTTATTTTGTTTTTCCCTGTCTTGAATTGCACGCAAACTCCTAAAATCAGTCAAATATAGATATTTTTTTGTGGCATGGATCAATTTTAGAACTCAATGGCATCAACTGATGCATGTAGCTGACTCATCTAATGCTTAGAGATGTTGTATTATTATTAATCCTGTTGAATGCCATGAACATTTCAGGCAACCCTCGGATCATTCACAGGGATATCAAGTCGTCAAACATTCTTTTAGATTTCAATTATGAAGCTAAGGTATCTGTCATTCTACATATTCAAAGTTTGATAGCTTGTTCTATTTGTATCAATCCAAATCTTATACTCTAGTTTTTAATGTCAGGTCTCAGATTTTGGGCTAGCCAAATTAGCTCTTGATGCAAATACGCATATTACCACGCGTGTCATGGGAACTTTTGGGTGAGCATTCATTGATATGTCTCCAAACTTCTCTTTTCTTTTTCACCGTTTCATTTTCCATTCAGACTATTAAGAGCAAAATGCTGTATTAACATTGATTTCCACCCTCATGTAAGGTATGTTGCCCCTGAATATGCTTCAAGTGGTAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTCGTGCTTTTGGAGCTAATTACCGGCCGGAAGCCGGTAGATGTATCCCAACCTTTGGGAGATGAAAGCCTGGTTGAATGGGTACATAAAGATGCTTCTTTTTCTAGTATTGCTTTGCTATAATTTTGTGAATCTTGAGAGAGAAGCCTAATATCAGTGTCTATTAAAACATATGTTTGGGGTTAAAGTCTATTTCTTGAATTTGCTTTTCTTCCCTTTGGAAATTGCATCACTTATCATAGTTACTGAAGTATGATAAGGATGACAAAATGCTTACTATTTGCAAAACTTGTAGAACAGCCATGGTTTCAATCAAGCTAAAAGAATGGAATGTATTGGTTTCAAGTTTAGCATGCATAATGTAGTTCACAGTTTTGTATCTGAAACTTTCATGGCCCTTCATAATTCAATTAAATTATGACTTGTTTTCCCTTGAATCTAGCTGAAGAAAGATGAAGAACTAATGTCACTAGAAATTGCAGTTCTACCTGTGAAAAAGAACATTTCGGTTGACATGGTCGAAGTGTGTTGTGTCAATAGTTGCATGCATGAACGAAAGCATAAAATTATACAGTTTAATAGCTAGAAACTGTCCAAACTTGTGAAATTCAAACATATTGATACCACTGTATTTTTCAGGCTCGGCCTTTACTAAGTCATTCAATTGATACTGAGGAATTCAGTAGTTTGGCAGATCCAAGGCTAGAAAAGAATTACATTGAGAGTGAATTGTATTGCATGATTGAGGTTGCTGCAGCTTGTGTGCGGCATTCAGCTTCAAAGAGACCTCGCATGGGACAGGTAGACATTAGATGTTGGAAAAACTGCAAAATGTTGTTTTGGATTATACCAACAAGCAAATGCACAAACTACTGACATGGTTTACCTGAATTGTTATGTTTCATAGGTTGTTAGAGCTTTTGATAGCTTAGGAGGTTCTGATCTAACTAATGGAATGCAACTTGGGGAAAGTGAGGTGTTTGACTCTGCACAACAATCTGAAGAGATAAGATTATTTCGGAGAATGGCATTTGGTAGTCAAAATTATAGCACAGATTTCTTTAGCCGTGCTAGTTTGAATCCATGAGAGGGCACTGTGTACATAATGGAAGAGCTTATTTCAAAGATCTTGTGAAGCTAAGCCAATGGCTGGCTCTGGTTGAGTTTTTGTTGCTTGCAGATATGGCCAAGGTGCTTGCATTCTTGCTTTTGATTCTGAAATTGACACCATCATTCTTCTACCTGAATTTCATCATTCTTTTCATTAGCTGGTTCTTTTGGCAGCAATTTTGGTTTTGTAAGTATAATTTGTAAAAAGTTACCTTCTGCAACACTCACCATTACAATGATTAACATATTAGTTGATTTGTTATGTAATGATAGAATAGATGTGTGACTATCTTTTTCGTGTGAGACTGAAAGGTGGGAGGGAATGGACTTTGTTGTCATGTTTTTTTGTTCAATTTGTAAGAAAACTTTAGATAGATTATATCATGATGACTACAAATTATGTAAAATTTAATTGAATTTAACTTTTCTATATGAATGTTTATGCAAACATTGTTTTATC