Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14808 LG3 52738520 52742138 PREDICTED: receptor-like protein kinase 2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   root meristem growth, root meristem growth, regulation of root meristem growth, root meristem growth, regulation of root development, regulation of root development, maintenance of root meristem identity, maintenance of root meristem identity, protein phosphorylation, regulation of root meristem growth, regulation of root meristem growth, protein phosphorylation, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, plasma membrane
Molecular Function   enables   protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, peptide binding, peptide binding, peptide binding, peptide receptor activity, peptide binding, protein binding, peptide binding, protein serine/threonine kinase activity, peptide binding, protein binding, peptide receptor activity, peptide binding, protein binding
SNP Position Effect Amino acid change
T/A 52738561 synonymous_variant p.Ser14Ser
C/A 52739018 missense_variant p.Leu167Ile
A/T 52739021 missense_variant p.Thr168Ser
T/A 52739367 stop_gained p.Leu283*
C/T 52739593 synonymous_variant p.Asn358Asn
G/A 52739599 synonymous_variant p.Val360Val
T/G 52739615 missense_variant p.Ser366Ala
C/A 52739617 synonymous_variant p.Ser366Ser
A/C,G 52739633 missense_variant p.Lys372Gln
A/T 52739634 missense_variant p.Lys372Ile
T/G 52739638 missense_variant p.Asn373Lys
C/A 52739669 missense_variant p.Leu384Ile
A/T 52739816 missense_variant p.Thr433Ser
G/C 52739831 missense_variant p.Val438Leu
C/A 52740925 missense_variant p.Asp802Glu
T/A 52740928 missense_variant p.Asn803Lys
G/C 52740930 missense_variant p.Gly804Ala
G/A 52740932 missense_variant p.Glu805Lys
A/T 52740934 missense_variant p.Glu805Asp
G/T 52740982 missense_variant p.Glu821Asp
G/C 52741143 missense_variant p.Ser875Thr
C/T 52741195 synonymous_variant p.Tyr892Tyr
G/T 52741210 synonymous_variant p.Gly897Gly
T/C 52741446 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14808.1
MLSSRQSLYISSSSSPSSSSLFCIILLQLTFLYGIAFSANHEASTLFSWLHASASPPPPSFSNWNILHSNPCNWTFITCSSLGFVTEINIQSIPLELPILSNLSSFHSLQKLVLSDSNLTGTIPSDIGDCSSLTVIDLSSNNLVGSIPASIGKLQKLQNLSLNSNQLTGRIPVELSNCIVLKNLLLFDNQISGTIPPELGKLSQLESLRAGGNKDIVGKIPEELGECSNLTVLGLADTRVSGSLPASLGKLTKLQTLSIYTTMLSGEIPPELGNCSELVNLFLYENSLSGSIPSELGKLKKLEQLFFWQNGLLGAIPEEIGNCTSLRKFDFSLNSLSGTIPVSLGGLLNLEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGQLSNLMVFLAWQNQLEGSIPSTLGNCSNLQALDLSRNALTGSIPVGLFQLQNLTKLLLISNDISGFIPNEIGSCSSLIRLRLGNNRITGSIPKTIGNLKSLNFLDLSGNRLSGPVPDEIGSCSELQMIDLSSNNLEGPLPNYLSSLSAVQVLDASSNRFSGPLPASLGRLVSLSKLILSNNLFSGPIPASLSLCSNLQLLDLSSNNLSGNIPAELGRIETLEIALNLSCNSLRGIIPAQISSLNKLSILDLSHNQLEGDLKPLAELDNLVSLNVSYNKFSGCLPDNKLFRQLTSKDFTENQGLSCFVKDSSKTDMSLNGNEVRKSQRLKLAIGLLIALTVIMIVMGITAVIKARRVIRDDDSELGDSWPWQFIPFQKLNFSVEQILRCLVDRNIIGKGCSGVVYRAEMDNGEVIAVKKLWPTTINAEEAFKEEKSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRQTRLLIFDYMPNGSLSSLLHERSGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPGKQPIDPTIPDGVHVVDWVRQKKGLEVLDPSLLSRPESEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANGASGNKNSGGVLPTASSSVPVMQTLKTKSNNSSFSVSSLLHSSSSVKMGSK*


CDS Sequence:
>Vu_14808.1
ATGCTCAGCTCGAGGCAATCCTTGTACATCTCTTCCTCTTCTTCTCCTTCTTCTTCTTCATTGTTTTGTATCATTCTCCTCCAACTTACTTTTCTCTATGGCATTGCCTTCTCTGCAAATCACGAAGCTTCAACTCTCTTCTCTTGGCTCCATGCTTCTGCATCACCACCTCCTCCTTCTTTCTCCAACTGGAACATTCTTCATTCCAATCCATGCAACTGGACATTCATAACATGCTCCTCACTAGGCTTTGTCACTGAAATCAACATACAATCCATCCCTCTAGAGCTTCCTATACTTTCCAACCTCTCTTCATTTCACTCTCTTCAAAAGCTTGTCTTATCTGATTCCAATCTAACTGGAACCATCCCTTCAGACATTGGTGATTGCTCTTCCCTCACTGTCATTGACCTCAGCTCCAACAATCTTGTTGGTTCAATTCCTGCAAGCATTGGAAAGCTCCAGAAACTTCAGAACTTGTCTTTGAACTCTAACCAGCTTACTGGAAGGATCCCTGTGGAGTTAAGCAACTGCATTGTTTTAAAAAATCTACTCCTTTTTGACAATCAGATAAGTGGGACTATCCCACCTGAGCTGGGGAAGTTGTCACAACTTGAGTCCCTAAGAGCAGGAGGGAACAAAGACATAGTTGGGAAGATTCCTGAAGAGCTAGGAGAATGCAGCAATTTGACAGTTTTGGGGCTGGCTGATACCAGAGTATCTGGTTCTTTGCCTGCTTCTTTGGGTAAGCTCACAAAGCTTCAGACTTTGTCCATCTATACCACCATGCTGTCCGGTGAAATTCCACCGGAGTTAGGTAACTGTTCTGAGCTTGTTAATTTGTTCTTGTATGAAAATAGCTTATCAGGGTCTATTCCATCTGAGCTTGGCAAGCTCAAGAAGCTGGAACAGTTGTTTTTCTGGCAGAATGGTCTTTTGGGGGCTATCCCAGAAGAGATTGGTAACTGTACAAGCTTGAGAAAATTTGATTTCTCCTTAAATTCTCTATCTGGGACCATACCTGTATCTTTGGGGGGTCTCTTGAATCTAGAGGAGTTTATGATTAGTGATAACAATGTGTCTGGTTCAATACCTTCCAGTCTTTCAAATGCTAAAAATCTTCAACAGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTAATTCCTCCAGAGCTTGGTCAGCTGTCAAACCTCATGGTGTTCTTAGCTTGGCAGAACCAGCTTGAGGGAAGCATTCCCTCCACTTTGGGGAACTGCAGTAATCTCCAAGCACTGGACTTGTCACGCAATGCACTCACTGGTAGTATTCCCGTTGGCCTATTCCAGCTCCAAAACCTCACGAAACTGCTTCTGATTTCCAATGACATATCAGGTTTCATACCAAATGAAATAGGCAGTTGCAGCTCCCTTATAAGGTTGAGGCTTGGAAACAACAGGATTACTGGTAGCATTCCCAAGACAATAGGAAACCTGAAGAGCTTGAACTTTTTAGACCTCTCTGGGAACCGCCTCTCCGGTCCAGTGCCTGATGAGATTGGAAGCTGCTCTGAACTGCAAATGATAGACTTAAGCAGCAACAACTTAGAAGGTCCTCTGCCTAATTATTTATCTTCACTATCAGCAGTTCAGGTTTTGGATGCATCTTCCAACAGGTTTTCTGGTCCTTTACCAGCAAGTTTGGGCCGTCTTGTTTCTCTGAGTAAGCTAATCCTAAGCAATAACTTGTTTTCTGGACCTATTCCTGCATCGTTGAGTCTATGTTCAAATCTCCAGCTGCTTGATCTTAGCAGCAACAACCTCAGTGGAAACATACCAGCTGAGCTTGGCCGGATTGAGACTCTAGAAATTGCTCTTAATCTTAGTTGCAATTCACTACGTGGAATAATTCCAGCTCAGATATCTTCTCTTAACAAGCTTTCCATATTGGACCTCTCACACAACCAGTTGGAAGGAGATTTGAAACCTCTTGCTGAGTTAGACAACCTTGTCTCACTCAATGTTTCTTACAACAAATTTTCTGGCTGTCTTCCAGATAACAAGCTTTTCAGGCAGTTGACATCAAAAGACTTCACTGAAAATCAAGGGCTCTCATGCTTTGTGAAGGATTCTAGCAAGACTGATATGTCACTGAACGGAAATGAAGTAAGGAAATCGCAAAGGCTTAAGCTAGCCATTGGATTGCTGATAGCCTTGACAGTGATAATGATCGTTATGGGGATAACTGCTGTCATCAAAGCAAGGAGAGTTATTAGAGATGATGATTCAGAACTGGGTGACTCATGGCCATGGCAGTTCATACCATTTCAGAAGCTAAACTTTTCAGTGGAACAAATACTGAGATGCTTAGTTGATAGAAATATTATTGGAAAGGGATGTTCTGGTGTTGTATATAGAGCTGAAATGGACAATGGTGAAGTGATTGCTGTGAAGAAATTGTGGCCAACAACTATTAACGCAGAAGAGGCATTTAAGGAAGAAAAAAGTGGAGTTCGTGATTCATTCTCAGCTGAGGTCAAGACCCTTGGCTCAATCCGTCATAAGAACATTGTCAGATTCTTGGGGTGCTGCTGGAACAGACAAACAAGATTGCTTATTTTCGATTACATGCCGAATGGAAGTTTGAGTAGTCTACTTCATGAGAGGAGTGGAAATTCTCTGGAATGGGAACTTAGGTACAGAATCTTGTTAGGGGCTGCAGAAGGCCTTGCATATCTACATCATGACTGTGTCCCTCCTATAGTCCACAGAGATATTAAAGCCAATAATATCCTCATTGGCCTTGAATTTGAACCTTACATTGCTGACTTTGGCTTGGCTAAACTCGTTGATGATGGTGATTTTGGTCGTTCTTCCAATACAGTTGCTGGTTCCTACGGATATATTGCTCCAGGTAAGCAACCAATTGATCCAACCATACCAGATGGTGTACATGTTGTTGATTGGGTGAGACAGAAAAAGGGTCTAGAAGTGCTTGATCCCAGCTTACTCTCTAGACCAGAATCAGAGATAGAGGAAATGATGCAGGCATTGGGAATAGCATTATTGTGTGTGAACTCATCTCCTGATGAAAGGCCAACAATGAGAGATATCGCGGCTATGCTGAAGGAGATAAAGCATGAAAGGGAGGAGTATGCAAAATTTGATGTGCTTCTAAAAGGGTCCCCTGCAAATGGTGCATCTGGGAATAAAAACTCTGGTGGAGTTCTGCCAACAGCTTCTTCATCAGTACCAGTCATGCAAACTTTGAAAACAAAAAGCAATAACTCAAGCTTCTCTGTGTCTTCTCTGCTGCATTCATCTTCAAGTGTCAAGATGGGTTCCAAATGA


Promoter Sequence:
>Vu_14808::LG3:52736520-52738520(+)
TATAATACCATAAAATTGGATTACATGTTATTTCATGACTAGAACCACATGTACCATAATTTATTTCATCATCTCCTTGGCATAAAATTGATTTAGCCAAGCAAAAAATCGGATTCTAGGAGTTTGGAATATGTTCCATACAACCCCAAAATGGATTCCATCAACACCCTCAATGTTTACATGAACTTATAAATGGGAAAGTATGGATTCTGGAAAGTTTTCTCACTTGAAGAACCTTGTATGTGGATTGAGAACACTATGCTTTCTCCTTTACGAGCTGCACCATGAGAAATCAACACAACTTCTTCTTTAGCACTAGGACCACGAGACTCTCACACAAGTGGACATTTGAAGGTTATATTAACGCAACACATATCTTTCAACCATAAGATTGATGGCGTTTTAAATCATCAAGCATCGCTTCTATGTGTGGTCAAAGAGCTAGAGAATCTCATTGTGTCTGCACTAGCTAGGAATCTCCATTGTTTTCATAGCCTTGCATATTTCACGTACATACTAATTACAATGTAATTTGAAATAAAAATTAAGGCTATTTTGGTCTTTCTTAGGAATATGCACAACGAGTGTATAATGCAAAATCTCCTCAAAAGTGTGTGGATGGAATAATCCGTTTACAAATCCGCCCTTGCAAATGAGATCAAATAAGTGGAAACAAATGCAACAATTAGTCATGTACCTATGATCAAACGATAACTATAGACGAGAGTGATTAGACAATCAGCTATAAGAGATAGATGATTACATTTAATACACATTAATTACTTAGGTTGTCGAACATTTAATGATTTTGGTATCATAGTACCTTATGCAAGTAACCTTCAAGTTTGATCAGAACTTTGACCAGAACGAACGTTAATAAAAATAGACATTTAGATCTTTAGAAGACATGAGTAAATAGTTTACCTGAATCCCATGACCAAAACAATTCACAAATTTGTTGTTTACTAATACAGAAACAATGGACTTGCTAACACAACCTAGTAACAATTAATAGGAAACCATTAAGATATTTTTATAACTGATTTTTCATAATAACGTTAGAGACTGTGGAATATAAAATAATTTCCAACTAATAGTTAGAACTTTAATATTTACAAGCTTGCCCACATTTTCCGAATACTGCTCAGTTAATTACCTCAGCAATATAATCAACCTAAGCTCACTCAGTTTTTACTGAGATTTTGAATGGTTATGAACTTATTAATATCATTAAGTTCATTCAATGATATTACTATAAACATTATGATAAAAAGTTTGACAAAGAATAATGTCTTTTCAATATGTAACTAGGATTTAATTCACACTTTTACTGGTTTCTGTGTATAAAATATGTGTGAAAAGAACATTCAACAACAGAGATAATTTCTTAAATAGTAAATTTTCTAGTTTCTTACTGTAGGCCAAAATAGCTTGAATACCCAGAAAGATATGTGTGATGAAGATAATAATTTATTAAGAACTTGGGCAACTTTTCTTCTTTAAAACTTTTTCACTAAAAATGAGAGAGGGTTTAAGAAAACCAGTGGCTAAGAAAGTAGCATGACTGAATAACTGAGCAATAAAAAAAAGACATAAATCAGATGAATGTGAAGTGCAGGTAAGCTCCAGAGGTATATAATAAGATGCCTATGTTCATTGCAAGAAACACCACCTGGCACAGCCCCATTATTCTAATGCTTTTTGCTTAGACACAAAGAAGCATCTTTAGTGTGGTGGGGTGGTGCTACTTCTGCAGCTGCTGCAGATTTTCTGATCTCTAGGCATTCAGTTTTATGTTATTTTATTCTCTTCTGGCTTGTGTGAACTGCTCCTTTTAGCTTTGTTTTGGAAAGAGAAGTGCTATTGTGAGTTTGAGTTCAAAGCAAGAAAGCCACAGCATACACATTCTCACAAGGTTGAGTGAAGAGTGCAAAACCCAATGACTCAAACCCAAGGAGAAGAAAAGTTTGGAATTTGAGGCAAATGTTTCATTGTTTCAA


Gene Sequence:
>Vu_14808(+)
ATGCTCAGCTCGAGGCAATCCTTGTACATCTCTTCCTCTTCTTCTCCTTCTTCTTCTTCATTGTTTTGTATCATTCTCCTCCAACTTACTTTTCTCTATGGCATTGCCTTCTCTGCAAATCACGAAGCTTCAACTCTCTTCTCTTGGCTCCATGCTTCTGCATCACCACCTCCTCCTTCTTTCTCCAACTGGAACATTCTTCATTCCAATCCATGCAACTGGACATTCATAACATGCTCCTCACTAGGCTTTGTCACTGAAATCAACATACAATCCATCCCTCTAGAGCTTCCTATACTTTCCAACCTCTCTTCATTTCACTCTCTTCAAAAGCTTGTCTTATCTGATTCCAATCTAACTGGAACCATCCCTTCAGACATTGGTGATTGCTCTTCCCTCACTGTCATTGACCTCAGCTCCAACAATCTTGTTGGTTCAATTCCTGCAAGCATTGGAAAGCTCCAGAAACTTCAGAACTTGTCTTTGAACTCTAACCAGCTTACTGGAAGGATCCCTGTGGAGTTAAGCAACTGCATTGTTTTAAAAAATCTACTCCTTTTTGACAATCAGATAAGTGGGACTATCCCACCTGAGCTGGGGAAGTTGTCACAACTTGAGTCCCTAAGAGCAGGAGGGAACAAAGACATAGTTGGGAAGATTCCTGAAGAGCTAGGAGAATGCAGCAATTTGACAGTTTTGGGGCTGGCTGATACCAGAGTATCTGGTTCTTTGCCTGCTTCTTTGGGTAAGCTCACAAAGCTTCAGACTTTGTCCATCTATACCACCATGCTGTCCGGTGAAATTCCACCGGAGTTAGGTAACTGTTCTGAGCTTGTTAATTTGTTCTTGTATGAAAATAGCTTATCAGGGTCTATTCCATCTGAGCTTGGCAAGCTCAAGAAGCTGGAACAGTTGTTTTTCTGGCAGAATGGTCTTTTGGGGGCTATCCCAGAAGAGATTGGTAACTGTACAAGCTTGAGAAAATTTGATTTCTCCTTAAATTCTCTATCTGGGACCATACCTGTATCTTTGGGGGGTCTCTTGAATCTAGAGGAGTTTATGATTAGTGATAACAATGTGTCTGGTTCAATACCTTCCAGTCTTTCAAATGCTAAAAATCTTCAACAGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTAATTCCTCCAGAGCTTGGTCAGCTGTCAAACCTCATGGTGTTCTTAGCTTGGCAGAACCAGCTTGAGGGAAGCATTCCCTCCACTTTGGGGAACTGCAGTAATCTCCAAGCACTGGACTTGTCACGCAATGCACTCACTGGTAGTATTCCCGTTGGCCTATTCCAGCTCCAAAACCTCACGAAACTGCTTCTGATTTCCAATGACATATCAGGTTTCATACCAAATGAAATAGGCAGTTGCAGCTCCCTTATAAGGTTGAGGCTTGGAAACAACAGGATTACTGGTAGCATTCCCAAGACAATAGGAAACCTGAAGAGCTTGAACTTTTTAGACCTCTCTGGGAACCGCCTCTCCGGTCCAGTGCCTGATGAGATTGGAAGCTGCTCTGAACTGCAAATGATAGACTTAAGCAGCAACAACTTAGAAGGTCCTCTGCCTAATTATTTATCTTCACTATCAGCAGTTCAGGTTTTGGATGCATCTTCCAACAGGTTTTCTGGTCCTTTACCAGCAAGTTTGGGCCGTCTTGTTTCTCTGAGTAAGCTAATCCTAAGCAATAACTTGTTTTCTGGACCTATTCCTGCATCGTTGAGTCTATGTTCAAATCTCCAGCTGCTTGATCTTAGCAGCAACAACCTCAGTGGAAACATACCAGCTGAGCTTGGCCGGATTGAGACTCTAGAAATTGCTCTTAATCTTAGTTGCAATTCACTACGTGGAATAATTCCAGCTCAGATATCTTCTCTTAACAAGCTTTCCATATTGGACCTCTCACACAACCAGTTGGAAGGAGATTTGAAACCTCTTGCTGAGTTAGACAACCTTGTCTCACTCAATGTTTCTTACAACAAATTTTCTGGCTGTCTTCCAGATAACAAGCTTTTCAGGCAGTTGACATCAAAAGACTTCACTGAAAATCAAGGGCTCTCATGCTTTGTGAAGGATTCTAGCAAGACTGATATGTCACTGAACGGAAATGAAGTAAGGAAATCGCAAAGGCTTAAGCTAGCCATTGGATTGCTGATAGCCTTGACAGTGATAATGATCGTTATGGGGATAACTGCTGTCATCAAAGCAAGGAGAGTTATTAGAGATGATGATTCAGAACTGGGTGACTCATGGCCATGGCAGTTCATACCATTTCAGAAGCTAAACTTTTCAGTGGAACAAATACTGAGATGCTTAGTTGATAGAAATATTATTGGAAAGGGATGTTCTGGTGTTGTATATAGAGCTGAAATGGACAATGGTGAAGTGATTGCTGTGAAGAAATTGTGGCCAACAACTATTAACGCAGAAGAGGCATTTAAGGAAGAAAAAAGTGGAGTTCGTGATTCATTCTCAGCTGAGGTCAAGACCCTTGGCTCAATCCGTCATAAGAACATTGTCAGATTCTTGGGGTGCTGCTGGAACAGACAAACAAGATTGCTTATTTTCGATTACATGCCGAATGGAAGTTTGAGTAGTCTACTTCATGAGAGGAGTGGAAATTCTCTGGAATGGGAACTTAGGTACAGAATCTTGTTAGGGGCTGCAGAAGGCCTTGCATATCTACATCATGACTGTGTCCCTCCTATAGTCCACAGAGATATTAAAGCCAATAATATCCTCATTGGCCTTGAATTTGAACCTTACATTGCTGACTTTGGCTTGGCTAAACTCGTTGATGATGGTGATTTTGGTCGTTCTTCCAATACAGTTGCTGGTTCCTACGGATATATTGCTCCAGGTTAGTGAGCCTTCCACACCTACTTGATTACATTCTTCCTTTGGATTCTTACTTAGTGTGAAGAAATTGCAGGCAATAGTTCGTTTTAGGAAGCCTTACACAGTTGCTTGGGCTTAATGATATCACTGGCTTCATTTCTATCATATTTTACATCTTTTGACAGATTTTAGACAATGTGTTTACCTTACTGAATCTGACTTTGAAACTGTTTCAGAATATGGCTATATGATGAAGATCACAGAGAAGAGTGATGTTTACAGCTATGGAGTAGTGTTGTTAGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACCATACCAGATGGTGTACATGTTGTTGATTGGGTGAGACAGAAAAAGGGTCTAGAAGTGCTTGATCCCAGCTTACTCTCTAGACCAGAATCAGAGATAGAGGAAATGATGCAGGCATTGGGAATAGCATTATTGTGTGTGAACTCATCTCCTGATGAAAGGCCAACAATGAGAGATATCGCGGCTATGCTGAAGGAGATAAAGCATGAAAGGGAGGAGTATGCAAAATTTGATGTGCTTCTAAAAGGGTCCCCTGCAAATGGTGCATCTGGGAATAAAAACTCTGGTGGAGTTCTGCCAACAGCTTCTTCATCAGTACCAGTCATGCAAACTTTGAAAACAAAAAGCAATAACTCAAGCTTCTCTGTGTCTTCTCTGCTGCATTCATCTTCAAGTGTCAAGATGGGTTCCAAATGA