Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14602 LG3 50016470 50017790 PREDICTED: serine/threonine-protein kinase STY46-like isoform X2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 50016652 synonymous_variant p.Val61Val
T/C 50016743 splice_region_variant&intron_variant
T/G 50016746 splice_region_variant&intron_variant
C/T,A 50016750 upstream_gene_variant
T/C 50016785 upstream_gene_variant
G/A 50016871 synonymous_variant p.Glu96Glu
G/T 50016886 missense_variant p.Leu101Phe
G/A 50016951 upstream_gene_variant
C/G 50017012 upstream_gene_variant
A/C 50017129 upstream_gene_variant
A/G 50017407 upstream_gene_variant
G/A 50017421 upstream_gene_variant
T/A 50017613 upstream_gene_variant
A/C 50017614 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14602.1
MSTGSSGSSATAAMEKTRVSRTSLILWHSHQNDAAAVRKLLEEDPSLVKARDYDSRTPLHVASLHGWVEVANCLLEFGADVNALDRWKNTPLADAEGAKKLPIIELLQLNGGLSYGQTGSHSEKNPVLPPLPNKCDWEVDPSELDFSHSVCIGKGSFGEILKAHWRGTPVAVKRILPSLSDDRLVM*


CDS Sequence:
>Vu_14602.1
ATGAGCACCGGCAGCAGCGGATCGTCCGCCACGGCGGCGATGGAGAAGACTCGGGTGAGTCGAACGTCTCTCATTCTGTGGCATTCGCACCAAAACGACGCCGCGGCTGTGCGGAAGCTTCTTGAGGAGGATCCATCGCTGGTGAAGGCTAGGGATTACGACAGCCGCACGCCGCTGCATGTGGCTTCGCTCCACGGCTGGGTCGAGGTTGCCAACTGCTTGCTTGAATTCGGTGCTGACGTCAATGCTTTGGATCGTTGGAAAAACACTCCTTTGGCTGATGCAGAGGGAGCTAAAAAATTGCCGATAATTGAGCTTTTGCAGTTAAATGGAGGCTTGTCTTATGGCCAAACTGGAAGTCATTCTGAAAAGAACCCTGTTCTTCCCCCATTGCCTAACAAATGTGACTGGGAAGTTGACCCATCCGAGCTGGACTTCTCTCATTCGGTTTGCATTGGAAAGGGATCTTTTGGTGAGATCTTAAAAGCCCATTGGCGTGGAACGCCTGTTGCCGTCAAACGTATTCTTCCATCTCTGTCAGATGATAGATTGGTGATGTAA


Promoter Sequence:
>Vu_14602::LG3:50014470-50016470(+)
GTTTGATTCGAACGAGCGTCCCTTTGGGTCTCATTTTACAGCGTTCGTCCTCGGTCTTTGAGGACAGAACGTTCGGTCTTGGTGGTTTCTTATGAATGGTGAAAATGATTATGTAATAATGATTATTACTTGGTGAACAGTAAATGACGAATGATGAAGAGTATATGAGATGAAATGAAAATATGAATACATGATGAAAAATGAATGATGAAGAGTATATGAGATGAATGGAAAGTTATGATTTTTGAAAGAGCGTTCCGGGGAGGAACGACTCAGAATTTGATTATCGAGATTTGTAAAGTATGACTGTGGGAAGTTAATGCTGGCTGTTCGATCCTGATGTTCCGTGAGTGCTTGTCCTCAAGTAGAGGGCGCACGTCATGCGTGGGAACGGCAGGAGGTCGTCGTCCTTAGAGGTACTTTGGACGGACGTACTAACCTCGGGTGGCAGCTGATGAGGATGCCAGTTACCACACCACCCGGGTGCGTGAACGCCTGTAACTACGCAGATTTCATACAGTCCGGACAGTCAGTCGTGTTGAGTTTTATTTAGTGTGTGCGTTACAGTGGGTTGTTATGTAATGAATATGTATGTTGAGTTATGCATGTATGTTGAATTGTTTACCTGAAATTGCATGTTGATGCATGAGTTGAATTACGTAAGCTTACCCTTTCGTTTTCCTTGTGTTGTCCATTGTATTTGTACGTCCGTCTTGTCATTGCAATGATCATCCGTGTGGATGTGAGCAGAGGGAGATGAGCGTTTGGAAGATGCGTTGAATGAAGAGAACCTGGTTGATGTCGAAGTGAAGATCGAGCAGTAAGACCGCTCGGCCTGTATTGTATTTAGTTGAATTGAGTGGTCGTTCGACCATCTTTTGTTTTCGTTTAAGTTTATTTCGACCGTTCGGTATTTGTCTTGTGTAAACCGTTCGGTCAGGTTTCTTGTACTTTGGCTTTAATTTGTAAACTCTTATGTGTGACGTGCGACCTTTGCACATTCTTCCGTTATGTTGGATTTGTACTCAAGGTCGTTCGTCCTTGAGTGCTCGTTGATTTCGCATTTCTTTAACTTTTAGTGTAAAACTGTTTGAGATTATTATTAAATGTGATTTTCTAAATTTATAGTTATAACTGTATTTTTGGGATGTCACAGAAAACTTCTACATTTTTTTATATAATTTTAGCATCTAAAAAAGTATAATTTTTCTTCTCAAAAATATTTATGATGAACTTTGTAAAAAAAACACTAAACAAAATAAGGGTTCTCCAAAATACTTTTATTAGATAGTTTTGATTTGATTTGGCATAATATGATAAAATGAAAGAGAAAATATTTATTTCAAAAGTTTATTTAACTTATTTTTTCTTAAATTTATAGAATATTATAGCAACAAACAATAATCTCAGACTAAATTAATTGTTTAGTCCAAAATGAAAGCATGATTTGATCCTTTGTGGATCAGCACGACCCATTTCTTAATCCAGTGTGAACAAAAGTTCTCCACTTAAGAAATATATATATATATATATATATTTTGAAATTGAACTTTGGCGATCTCTAAATATTAAATTAGTAAAAGGAGCACGAAAGGTGAGATAGCTATACCCCACGCCTGATCCTAAAAAAAACAGAAAAACAAAATGCTTTAAAGTGAAGATAATATTTAAAAATAGAATTCGAATACGGAATTACTTAATCACGATACAGTTGATTAACTAAAGTGTAATGCACTTGAATAAAAAATTGACAGTTGAATTAGTAAACGCAGAATAACTAATAAAACTGATAAGAGAGCCAAAAACTTCACAATCACATGACACCAACAAACTAGAAATGAGAAGAAACAAAGCCACAAATTAACACATTACACATTACAGCGAACCGTTTTCTGATCTTCAATTTCATTTGCATGTGAATTTTGCAGCATATGGTTTCCGCGTTGCATTTCGCGAGTAGTAATCAAAACATAGCAATTGAAGAGGGCGGCAACCGGCAA


Gene Sequence:
>Vu_14602(+)
ATGAGCACCGGCAGCAGCGGATCGTCCGCCACGGCGGCGATGGAGAAGACTCGGGTGAGTCGAACGTCTCTCATTCTGTGGCATTCGCACCAAAACGACGCCGCGGCTGTGCGGAAGCTTCTTGAGGAGGATCCATCGCTGGTGAAGGCTAGGGATTACGACAGCCGCACGCCGCTGCATGTGGCTTCGCTCCACGGCTGGGTCGAGGTTGCCAACTGCTTGCTTGAATTCGGTGCTGACGTCAATGCTTTGGATCGTTGGAAAAACACTGTATTCTCTCCCTCTCCCTCTCTATTTATGTCGTGTTATGATAGATTCGTTAACTAGAGAATTTTTTTTTAACTTCTTCTGACGAATAAATTAGTGTTGTTTTGTTCTGGAAAGCCTTTGGCTGATGCAGAGGGAGCTAAAAAATTGCCGATAATTGAGCTTTTGCAGTTAAATGGAGGCTTGTCTTATGTAAGTATATTCAATGGAAGGGGCATTATTTTGTAACAACGAAAATATAAATGTGAGCACGTCGATTAACTGACACTGACATACATTGTTCGAGCTTAATGAAATCGTCTTTAGTTCTAGTCATGTTGCCTTACGGGAAGTATGATACCTGTTGTCTCAAACCAAAAGATAAAATAAAAATGTATTTTCTATTGCAGTAAAACGAGGGAAGAATGAGTTTGTGATACTGATGTGTGTATGAGTTTGATGTTTGATTACGCAGGGCCAAACTGGAAGTCATTCTGAAAAGAACCCTGTTCTTCCCCCATTGCCTAACAAATGTGACTGGGAAGTTGACCCATCCGAGCTGGACTTCTCTCATTCGGTTTGCATTGGAAAGGTGTTTTCTTTATTTTCTTGATCTCATTTGCATTGTACTGTATCAAAATCTTACTGTGAATTTTAGAAATTGCACTGTATTTATTGTGATAGAGCTGTAAGTATGAAATTGTTGTTTTCATCATAGACTGTATCGTATGTGAGTACAATTAGTTGTGAGTCTTCAATTGTCAATCTTCGTGATGATAATCTGGTCATTTATGTTTTTTAATTATTTGTCTTGGTTTTTTTAAGTTTTTTAATTTCTGTATCCACTCTGTTTCTTGCTGTCATTTCTACATGATTGCTTTACAGCTCATGTCATTTTACTTTTACTTTGCATTTATACTGTTAATGAACCAAATCTGCTCTTGAGGTTTGATCTTTGTGGGTGTGTTTTCTGAAGGGATCTTTTGGTGAGATCTTAAAAGCCCATTGGCGTGGAACGCCTGTTGCCGTCAAACGTATTCTTCCATCTCTGTCAGATGATAGATTGGTGATGTAA