Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14591 LG3 49837729 49842612 PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   embryo development ending in seed dormancy, cell morphogenesis involved in differentiation, seed development, meiotic cell cycle process, cellular protein modification process, growth, nitrogen compound transport, tissue development, seed development, cell division, protein phosphorylation, protein phosphorylation, anatomical structure arrangement, seed development, embryo development ending in seed dormancy, negative regulation of metabolic process, microtubule cytoskeleton organization, meiotic cell cycle process, phosphorylation, meiotic cell cycle process, anion transport, protein localization to organelle, cellular macromolecule localization, negative regulation of cellular process, protein phosphorylation, microtubule cytoskeleton organization, phosphorylation, mitotic cell cycle, embryo development ending in seed dormancy, cell differentiation, seed development, embryo development ending in seed dormancy, cell morphogenesis involved in differentiation, cell morphogenesis involved in differentiation, embryo development ending in seed dormancy
Cellular Component   located in   plasma membrane
Molecular Function   enables   protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, kinase activity, protein binding, protein binding
SNP Position Effect Amino acid change
C/T 49838267 synonymous_variant p.Thr445Thr
C/A 49838276 missense_variant p.Trp442Cys
T/A 49838379 intron_variant
T/G 49838402 intron_variant
G/A 49838752 intron_variant
G/T 49838834 intron_variant
A/T 49838858 intron_variant
C/A 49839031 intron_variant
T/G 49839212 intron_variant
A/C 49839250 intron_variant
G/T 49839397 intron_variant
C/G 49839492 intron_variant
G/T 49839586 intron_variant
A/G 49839587 intron_variant
T/A 49839595 intron_variant
A/G 49839606 intron_variant
G/A 49839608 intron_variant
T/C 49839616 intron_variant
C/T 49839634 intron_variant
G/A 49839668 intron_variant
C/T 49839673 intron_variant
C/A 49839690 intron_variant
T/C 49839693 intron_variant
T/C 49839719 intron_variant
G/T 49839792 intron_variant
C/T 49839976 intron_variant
A/G 49839996 intron_variant
T/A 49840017 intron_variant
C/G 49840063 intron_variant
A/T 49840254 intron_variant
T/A 49840339 intron_variant
T/C 49840363 intron_variant
T/A 49840367 intron_variant
T/A 49840368 intron_variant
A/T 49840369 intron_variant
G/T 49840639 intron_variant
T/C 49840682 intron_variant
G/A 49840861 intron_variant
T/C 49840874 intron_variant
T/G 49840888 intron_variant
T/C 49841000 intron_variant
A/T 49841003 intron_variant
T/C 49841004 intron_variant
A/T 49841005 intron_variant
A/T 49841007 intron_variant
T/G 49841291 intron_variant
A/T 49841338 splice_region_variant&intron_variant
C/T 49841485 synonymous_variant p.Glu376Glu
C/G 49841498 missense_variant p.Gly372Ala
G/A 49841503 synonymous_variant p.Ser370Ser
G/A 49841560 synonymous_variant p.Tyr351Tyr
C/T 49841581 synonymous_variant p.Lys344Lys
T/A 49841594 missense_variant p.Glu340Val
C/T 49841599 synonymous_variant p.Ser338Ser
C/T 49841620 synonymous_variant p.Leu331Leu
A/G 49841646 synonymous_variant p.Leu323Leu
G/A 49841678 missense_variant p.Ala312Val
T/A 49841694 missense_variant p.Arg307Trp
G/T 49841886 missense_variant p.Pro243Thr
G/A 49841900 missense_variant p.Pro238Leu
G/T 49842114 missense_variant p.Leu167Ile
G/T 49842142 synonymous_variant p.Ser157Ser
A/G 49842144 missense_variant p.Ser157Pro
G/A 49842213 missense_variant p.Pro134Ser
G/T 49842454 synonymous_variant p.Ala53Ala
G/C 49842571 missense_variant p.Phe14Leu
A/G 49842573 missense_variant p.Phe14Leu
C/T 49842595 synonymous_variant p.Ala6Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14591.1
MAMASASLPSPFLFLLTSIFMLLYLSLLTHSINADFHPLMSFKAASDPSNNLAQWNSTTSDPCTWYGVSCLRNRVSRLVLQDLNLTGSIHPLTSLTQLRILSLKRNRFNGPITSLANLTALRLLFLSHNNFSGPFPATLTSLYRLDLSHNSLSGEISPTFNRWTHLLTLRLDSNRFRGRIPSNINLSRLQDFNVSNNLLTGQIPESLSGFPGSAFSHNPSLCGAPLQECIAKGEAIIPALASPLKPRNDTGFSKPRGRERIMGVLVLVGIVVGDVLVLALVSLLLYYYFWRNYSAAAQLRKEEKERRSWKTADEYKGDGMVFLEGVRRFELEELLRSSAELLGKGALGSAYKAVLDDGTVVAVKRLKEVSVGGKKEFHQRMEVLGSLRHSNVVSLRAYCFTKDDKFLVSDYMCNASFSFLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHKHKLTHGNIKATNVLIDVAGNARVADFGLSIFAGASILRSNGYRAPEVSDGRKQTQMSDVYSFGVLLIEMLTGKCPSTVVDLPRWVRSVGREEWTAEVFDLELMSYKDIEEEMVALLQIAIECTETEPHQRLKMSHVVKMIEELRRVQMLPCDEGLESLSGSLSIPEASASQ*


CDS Sequence:
>Vu_14591.1
ATGGCAATGGCATCAGCGTCACTCCCTTCCCCTTTCCTCTTCCTTCTCACCTCTATTTTCATGTTGCTTTACCTCTCCCTCCTCACTCACTCCATCAACGCCGACTTCCACCCTCTAATGTCGTTCAAAGCCGCTTCCGACCCTTCCAACAATCTCGCCCAGTGGAACTCCACAACCTCAGACCCCTGCACTTGGTACGGTGTCTCTTGTCTCCGTAACCGTGTCTCTCGCCTCGTCCTTCAAGACCTAAACCTCACAGGCTCCATCCACCCCCTAACCTCTCTCACCCAACTTCGTATCCTCAGCCTAAAACGCAACCGTTTCAACGGCCCCATCACCTCTCTCGCCAACCTCACCGCGCTCCGCCTTCTCTTCCTCTCCCACAACAACTTCTCCGGCCCCTTCCCCGCCACGCTCACCTCTCTCTACCGCCTTGATCTCTCACACAACAGTCTCTCCGGCGAAATCTCCCCCACTTTCAACCGCTGGACCCACCTCCTCACCCTCCGCCTCGACTCCAACCGTTTCCGCGGCCGCATTCCCAGCAACATCAACCTCTCTCGTCTTCAAGACTTTAACGTCTCAAACAACCTCCTGACGGGTCAAATACCCGAATCGCTCTCGGGTTTCCCTGGATCCGCGTTTTCTCACAACCCCTCCCTCTGCGGAGCTCCCTTGCAAGAATGCATAGCCAAAGGCGAGGCAATCATCCCGGCCCTGGCTTCCCCATTGAAGCCGCGAAACGACACCGGTTTTTCCAAACCCCGCGGGCGGGAGAGAATAATGGGGGTGTTGGTCTTGGTGGGTATTGTGGTGGGGGACGTGCTGGTGCTGGCTTTGGTGTCGCTGCTTCTCTACTACTATTTCTGGAGGAACTACTCTGCTGCTGCACAATTGAGAAAAGAGGAAAAAGAGAGGAGGAGTTGGAAGACGGCGGATGAGTATAAGGGTGATGGAATGGTGTTTTTGGAAGGGGTGAGGAGGTTTGAGTTGGAGGAGCTGTTGCGTTCGTCGGCGGAGTTGTTGGGAAAGGGTGCGTTGGGGAGTGCCTACAAAGCGGTGCTTGACGACGGAACTGTGGTGGCGGTGAAGAGGCTGAAGGAGGTTAGCGTTGGAGGGAAGAAGGAGTTCCACCAACGAATGGAAGTGCTTGGAAGTTTGAGACACTCAAACGTTGTTAGTTTGAGGGCTTACTGTTTCACCAAAGACGACAAATTCCTCGTCTCTGATTACATGTGCAACGCTAGCTTCTCATTCCTTCTCCACGGTAATCGAGGACCAGGGCGGACCCCACTGGACTGGACAACGAGGTTGAAGATCGCAGCTGGAGCGGCACGAGGCGTGGCATTCATTCACAAACATAAACTCACCCATGGAAACATCAAAGCCACCAATGTTCTTATTGACGTGGCGGGCAACGCGCGCGTCGCGGACTTTGGTCTCTCCATCTTCGCTGGCGCCTCCATTCTAAGATCCAACGGCTACCGGGCGCCAGAGGTATCGGACGGTCGCAAGCAGACACAGATGTCTGACGTGTACTCCTTTGGCGTCTTATTAATAGAGATGCTGACGGGGAAGTGCCCCTCCACCGTGGTGGATCTCCCCAGGTGGGTCCGGTCGGTTGGGAGAGAGGAGTGGACGGCCGAGGTATTCGATTTAGAACTGATGAGCTATAAGGACATTGAGGAGGAGATGGTGGCGCTGCTGCAGATAGCTATCGAGTGCACTGAGACCGAACCTCATCAACGGCTCAAGATGAGCCACGTGGTGAAGATGATTGAGGAATTGCGTCGGGTCCAGATGTTGCCGTGTGATGAAGGGTTGGAATCGCTGTCTGGGTCACTCTCGATCCCTGAAGCAAGTGCAAGTCAATGA


Promoter Sequence:
>Vu_14591::LG3:49842612-49844612(-)
CATGTTGTGAGACACTTGTAAGGAAAGAACTATGGTTGTATTTTTCTAATTAACACAACTCACAAGACAAACTTGATAACTTAGATAAACTTGGAACAACCTACTACATCTTGGCAATGCTAGAAAGACTCAACTTAGCATGAATGAGAAAGAGAGAATACATGATCAAACTAACATGAGCAAATGTTGTAGATGATAAAGACCTGTAAAGCATAACATTGATCAATTTTGTGACCAAGCTTGTGAGAATGCTCACACTTGTGACGCTTTTTGCATAGCTTATAACAATGATTGTCATCATCATGTTAAGATACCAATATTGAAGAGTCATCAAAGGTGACTAAAGAAGGTATTTTAGTGGTTGACTTACTTGACACACGCAAAAAGGTGGAACAAGTGAAAGTAAATGTACGTATAATAACCAAAAATTTGATCATAGATATGCGAATAATCATTAAGAAGTCCATGTAAAACCAAAAACATGAAAAACTTTTATCGTTCCTCTTGTTCTTGAGAAGGAGTAGAGAAAGAGGCAATTACAACTTTTTGAAGTCATGGAGAACATGAACTTTATCTAAATATTCATCCATTGTACCAATAAGATATATGGGAGTAACAATATTTAGGATATTTTGACAAATATCAAAAAGATGTTGAGTATCATTGTTGTATGATGGGCGCCCACACAACAACCAAATATAACAGCAAGTATATTGGGGTAGTTTGTAGTATATAAAGTGTCGTATCCACAAAATTTTCGTAGAAAACACAATGTTCTAACTAGTTTGGTTGTTGATAATATAGTTAAAATGATTGTGAAATGTATAAAACAGATTTGTTTCATGAAAATAAAGTAAGAGATGTCAGAAAACAATTTGGATTACAAAACGAGTAACTTTTAGATGATTAAGATGTGTGGAATAGATTTAAAGCTTATGATCGCCAAACTTCAGTATGATTCTTTAATGACTACTTGAATGGATCACCTGATTTAAGATAATGACTATGTGTCCAACTACAATCTTATATCAATTCCTAACATCTAAATGTAGTGTTGTCAAAATGGGTTAAAATCTGCGGGCCAACCCGGCCCACCACAAGTTCGGACTGAGTTGAATTTGAAAAAAATGTAATTTTTTTATACGGGTCAATTTTCAAGCTGATCCACTCAGAACCTGACTCACCTGGGTTGAATGCCTGGTGAGTCGAGTTAGATGACCAACCCACCTAATTTAATTTAATTATTTATTATTATGTGTTTCAATATTATTAGATTACATTTTTTTATTGTATTGTGATAATGATTTTGGTAATCATAAGTCCATTTCGAAACCTTTAAATACAGGTCAAAGGTAAAGAGATATATGATTACATTTATTGCAAATTTAAGATTTTACTGTGATCCCGATCAATTAAATTATTGATTTAAACGTTATAGTGTCTCTAACTAGTATTCACTGGTACGATTTGGAGTTCGTAAAAAACATAGAAAAAATTTAACTAACTATGTTGAAGACAACTTAAGTTAACCTTAACAAAAAAAATTGTGAATAATTGTTTTCTAAAAATCTTCCGTCACCACCATGAGAATTTAAAATAACTTCAATTTGATTAGAATAAAATGGTTGAGAATTATCACGACTTCCTCGTATGAAGGTTGTGTCACTTTAACAAACTTACTTGTAATTTTTTTTAAATTACCATAATTTTAACTTTAAATTGTCCCATCATAAAAAAATATCACTATTTTTATAAATATGTAAGTAGAATAACCAGCATTTTATTTTCCGTAGATGATAAGTTATAATATACATTCATTGTTATGTAACTAAATTATAATTACATTTTTATACGACCAAATTACAATGATTTTATTTATTTATTTATTAAATAATTTAATTTAAAAAAAAGTAGTTGTCGACATTTCTTTTCTTTATTTTCCATTTCTGCTGGCACTAATACTAAACCAACCGCTGCGGTTTCATCACTGGCAGCACCAA


Gene Sequence:
>Vu_14591(-)
ATGGCAATGGCATCAGCGTCACTCCCTTCCCCTTTCCTCTTCCTTCTCACCTCTATTTTCATGTTGCTTTACCTCTCCCTCCTCACTCACTCCATCAACGCCGACTTCCACCCTCTAATGTCGTTCAAAGCCGCTTCCGACCCTTCCAACAATCTCGCCCAGTGGAACTCCACAACCTCAGACCCCTGCACTTGGTACGGTGTCTCTTGTCTCCGTAACCGTGTCTCTCGCCTCGTCCTTCAAGACCTAAACCTCACAGGCTCCATCCACCCCCTAACCTCTCTCACCCAACTTCGTATCCTCAGCCTAAAACGCAACCGTTTCAACGGCCCCATCACCTCTCTCGCCAACCTCACCGCGCTCCGCCTTCTCTTCCTCTCCCACAACAACTTCTCCGGCCCCTTCCCCGCCACGCTCACCTCTCTCTACCGCCTTGATCTCTCACACAACAGTCTCTCCGGCGAAATCTCCCCCACTTTCAACCGCTGGACCCACCTCCTCACCCTCCGCCTCGACTCCAACCGTTTCCGCGGCCGCATTCCCAGCAACATCAACCTCTCTCGTCTTCAAGACTTTAACGTCTCAAACAACCTCCTGACGGGTCAAATACCCGAATCGCTCTCGGGTTTCCCTGGATCCGCGTTTTCTCACAACCCCTCCCTCTGCGGAGCTCCCTTGCAAGAATGCATAGCCAAAGGCGAGGCAATCATCCCGGCCCTGGCTTCCCCATTGAAGCCGCGAAACGACACCGGTTTTTCCAAACCCCGCGGGCGGGAGAGAATAATGGGGGTGTTGGTCTTGGTGGGTATTGTGGTGGGGGACGTGCTGGTGCTGGCTTTGGTGTCGCTGCTTCTCTACTACTATTTCTGGAGGAACTACTCTGCTGCTGCACAATTGAGAAAAGAGGAAAAAGAGAGGAGGAGTTGGAAGACGGCGGATGAGTATAAGGGTGATGGAATGGTGTTTTTGGAAGGGGTGAGGAGGTTTGAGTTGGAGGAGCTGTTGCGTTCGTCGGCGGAGTTGTTGGGAAAGGGTGCGTTGGGGAGTGCCTACAAAGCGGTGCTTGACGACGGAACTGTGGTGGCGGTGAAGAGGCTGAAGGAGGTTAGCGTTGGAGGGAAGAAGGAGTTCCACCAACGAATGGAAGTGCTTGGAAGTTTGAGACACTCAAACGTTGTTAGTTTGAGGGCTTACTGTTTCACCAAAGACGACAAATTCCTCGTCTCTGATTACATGTGCAACGCTAGCTTCTCATTCCTTCTCCACGGTAAGTATTGCTTTTTTACTCTTATTATTATTTCAACCCTTTCAAATTACAATAAAATTATTCTGCTTAATGTAGAGAAGTAAGAATTAAAAAAAAATCTACTTTTTTCAACATACCTCATAAATAACTTTGGATGAATTTCTTGATAAAATTTAGAATGAAATTAACAAGTTTAAATATTCGAATTAAAAATTATCCATAATAGGGAAGTAAAATCTCCAAACATTTATGAAATTGTAGAAACCTTGTCCATTCTCCATACCTTCTGATTCAATTATAAACACTTATCATGAGAATAGTTGTTAAGTTTATTTAATATATATATATATATATATATATATATATATAAAGAAGCATTTTTCTTAAACTAGGATGAAAATGATATATTTAAATTTAAAGATAAGAGTATTTTTTAAATAATAACATCAAATAAGATTTAAAAACACTACAATTTTACATATAGCTAAATCAATTAGATTTTTTTCCCCTTATATTTAGTTTAAGAAGAATATAAATTATCCATCTCTAGCTCCAAACTAAAACTCAGGCAATATACTTTTTTTCTCTAGTCTTCTTTATACATATGTAGACTCTAATTGCTGTGATTTTCTACTTTACTTAACCTAAGTTATGAAATATAATTATCCTTTTTATTAATTGTATAATTTATTTTTTAAATTAATAAAAATTTCAATTTCATCCCTCACTTTTTGAAATTTATGTAATATTACCTTTTCCAATATTAACAAATAATGGTACGTGACAATTACGTGTCACTGTTTATTCTATTAGATATAGAATCAATTCACTATCATGATTATGAATATTACGATAGAAAATTTTCTCAATAATAGAAACAATATTTAATGTATTAAAACAAAAGGATATATCAGTTTTTTTATAACTTTTTTTCATAAAAGCATTTAGAATGGAAAAATAAAAATTGCTGAAAATTAAAATCAACTATAGGCTTTTTTAAAAAAAAAATTAGTATCTCAATTTTTTTAAAATATATATAAATTACTTTTAAGATATGAAAAATTCATTTATATTTCTTTTACTTTATTTTAACTTTTTTTCTTTCCCATCTATTTTTTTTATAAAAATAATTGTGGAAAGATTCCTTCGTGCTATCAAAGAAAATCTAGTTCTTAAACTATTGTTTGAGATTTTCTCAGTAATTTTTAAAATTTGTCAATTTATAATATTTTTATTTTATATACGAGTTCACACACTTTTCACAATATATTTCTATTTATTTTCCATCTTCTTCTCTTTAGTTGAAACAGTCACTCTCTTCTTTATTTCTCTTCTTTTATCCTTTCTACACTTCAACCTAATTTCCCCATTTTTGTCGAAGGAAAGATTAGACATAAAATATAGTGTGTAAGGTTAAAAAATGTCACCACCAAAGTCTGGCACCCAAATTATTCATCCATGATGGTGTAATGAATAAGACAGCCATGCATGTAGGGTACCAAAATCAAACTAGTTATGTTTTTGTTTTTATGGTAGGGGCCCACATTGATCATGCATCTTTCTTTGCATCAAAACATCAACCTGCACTTCTTCCTTCACTTTCATTTCTTGCTATTTTTTCATACGGTGAATTTCAATTTTCTACTAATTTTTTATGGTATTATTGTTAAAAAATAGACTTTAAGTCTAATTTGATTTCACAAAATCAGTTTCTAAAATGAGATTTGAATTTGTTTATATATTATAAATTAGTTTTATCTTTAGTTAGTGTAAAACTTTTCACCTAATTATTTGTTAAATTTTCAAAGTACAATATTTTAAAAATTTTCTTAATATTATTTAAAACATCAGAGGAAAAAGACCAGTAAAATGAAGCAGGAGTAGTAAGGGTTTACTGCTAAGAAGAACAGACTGCATTTCTGTGTTAGATTCTTTCCTTATAAAAGTGAGGAAAAGAACAGACACACTTCGTCTATTTTCTTCTTTGCTTTTTGTTCTTTTCTTGAACAACCTTCGGTCTTTTACTTTTATCTTTAGCCACCCAAAGCAGAAAATGTAACTAAAAAAAGCAAAGTAGGCCAATCATAAACATTTGAACCCTTATACAAAAGTGAGATGCCCATGCTAATATACCATATTAAACTGGAAAAGCCAAATTATTAAGATACTTAATGCCATTTTCTTCTATTGATTACCTTTAGGTTATGTATGTTTTTCTTTTTTTAAATTTACTTATTAATTAAGCCTTCTAAATTTAAATTAATAAATTTTAGCCTTTACTTCTTTCCCTTTCATCAAAAACTGATAAACTCTCTCATTTTATACCTAATCAATTGAGGTGATACGATGAATTGAACAACGTCTTCGAAATTAAATTACAGTCAAAATTTGAAGATAAGAAGTCTAACTAAGATTTGAACATCTGAAAGTATGATAGTTAGTTGATTAATTTTTTTATGCTTTTTTTTATAAATATATGTAGAGACTTGTGTGTAAAAGGGAGGTTAATATTAGATTAAAAATGAACTTAATCTTAAAATTAGTTAATTGATTAAGTAAAATTAAAATCTAAAATTAAAATCAAACCTTATAATTAATATGACAAGTCTTTACACAAGAAATGACCGATATTTGTTATATTTATCCGACTTCTTTCTCTATTAATTAAAATGTACTAGATTTCTTAAAAAAATCAAATTTACTAAATATTAAAATACAACAGAAAAAGATCACTAAATGAAAAGAAACTTTCAAATAATTTATTTATTTGTTAGCAAATTCAACTCATGTTTTAAAGACGTGTTTACAAGAAATGAAAATAGCTATTGAAAACTTTGGAAGAATAAAAATTGAAGAAAATTATGTTACAGGAATTAAAATAAAAAATGAGATCTCTTGTAATAATTTAAAAGATATAAAATTATTTAATTAGTTGGTAATAGAAAAATATTAAAAAACCAAAATAAAAAAATTACATGGGGTTGAGAAGGGGCAAAAGAGTAAATAAGAAAAATGAGTGTCATCCGACAGGTAATCGAGGACCAGGGCGGACCCCACTGGACTGGACAACGAGGTTGAAGATCGCAGCTGGAGCGGCACGAGGCGTGGCATTCATTCACAAACATAAACTCACCCATGGAAACATCAAAGCCACCAATGTTCTTATTGACGTGGCGGGCAACGCGCGCGTCGCGGACTTTGGTCTCTCCATCTTCGCTGGCGCCTCCATTCTAAGATCCAACGGCTACCGGGCGCCAGAGGTATCGGACGGTCGCAAGCAGACACAGATGTCTGACGTGTACTCCTTTGGCGTCTTATTAATAGAGATGCTGACGGGGAAGTGCCCCTCCACCGTGGTGGATCTCCCCAGGTGGGTCCGGTCGGTTGGGAGAGAGGAGTGGACGGCCGAGGTATTCGATTTAGAACTGATGAGCTATAAGGACATTGAGGAGGAGATGGTGGCGCTGCTGCAGATAGCTATCGAGTGCACTGAGACCGAACCTCATCAACGGCTCAAGATGAGCCACGTGGTGAAGATGATTGAGGAATTGCGTCGGGTCCAGATGTTGCCGTGTGATGAAGGGTTGGAATCGCTGTCTGGGTCACTCTCGATCCCTGAAGCAAGTGCAAGTCAATGA