Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14501 LG3 48738563 48740234 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, DNA damage checkpoint signaling, DNA damage checkpoint signaling, DNA damage checkpoint signaling, regulation of transcription, DNA-templated, response to gamma radiation, regulation of meiotic nuclear division, regulation of meiotic nuclear division, regulation of meiotic nuclear division, regulation of transcription, DNA-templated, regulation of meiotic nuclear division
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
T/G 48738567 missense_variant p.Asn309Thr
C/T 48738569 synonymous_variant p.Val308Val
A/G 48738570 missense_variant p.Val308Ala
C/A 48738637 intron_variant
A/T 48738710 synonymous_variant p.Arg287Arg
T/A 48738777 missense_variant p.Glu265Val
T/A 48738806 synonymous_variant p.Leu255Leu
C/T 48738875 synonymous_variant p.Gln232Gln
G/A 48738914 synonymous_variant p.Val219Val
C/T 48738965 synonymous_variant p.Ser202Ser
C/A 48738984 missense_variant p.Ser196Ile
T/G 48739032 missense_variant p.Gln180Pro
G/A 48739111 intron_variant
A/C 48739121 intron_variant
C/A 48739174 intron_variant
A/G 48739203 intron_variant
A/T 48739374 intron_variant
T/G 48739470 intron_variant
A/G 48739519 intron_variant
T/A 48739594 intron_variant
C/T 48739724 intron_variant
C/A 48739795 missense_variant p.Cys147Phe
G/A 48739808 missense_variant p.Leu143Phe
C/T 48739839 synonymous_variant p.Lys132Lys
T/A 48739953 missense_variant p.Glu94Asp
T/C 48740020 missense_variant p.Asn72Ser
G/A 48740073 synonymous_variant p.Val54Val
A/T 48740076 synonymous_variant p.Ile53Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14501.1
MMKILGIKQDGSASFFFHRAIKAYNTGNRKRRKITSQDFGEARWHKTGKTKPIVLGGARKGWKKIMVLYENNIGGGKDEKTNWVMHEYHLGAKEDENDGEYIFSKVFYQQQVKLGDKDDQDVTEATESTIVKVVPNTPKLVTLDPPCNKRHCANLDQGQETHSLLLSQMDCLHEIQDDCQELATESQNEGVENKESNAEEGSKWWDSQSQNMLDSQQLVEALSLCDDLLYSQSPSRDGKHEDHKSQPGLSVYAQLGPECLKKDIEECQNLVVHDPANIVNDNPSEIRLSQLEFSSQDSFISWGYNKAVN*


CDS Sequence:
>Vu_14501.1
ATGATGAAAATTTTAGGTATTAAGCAAGATGGAAGTGCTTCGTTCTTTTTTCATAGAGCAATCAAGGCTTACAACACTGGCAACCGAAAGCGTAGAAAGATAACAAGTCAAGATTTTGGTGAGGCCCGCTGGCACAAGACTGGAAAGACTAAACCAATTGTCTTGGGTGGGGCTCGAAAAGGATGGAAAAAGATTATGGTTCTGTATGAAAATAATATAGGAGGAGGAAAAGATGAAAAAACTAATTGGGTTATGCATGAATATCATCTAGGAGCAAAAGAAGATGAAAATGATGGGGAGTACATTTTCTCTAAAGTGTTTTACCAGCAACAAGTGAAATTGGGTGATAAAGATGATCAAGATGTTACTGAAGCAACTGAATCAACAATTGTGAAGGTGGTTCCAAACACTCCCAAATTGGTGACACTTGATCCTCCTTGCAACAAAAGGCATTGTGCAAATCTGGACCAAGGACAAGAAACACATAGTCTACTGCTGTCTCAGATGGATTGTTTACATGAAATTCAAGATGATTGCCAAGAACTTGCAACTGAATCTCAAAATGAAGGGGTGGAAAATAAAGAAAGTAATGCTGAGGAAGGCTCGAAATGGTGGGACAGCCAGTCACAGAATATGTTGGATTCGCAACAACTGGTCGAAGCTCTGTCTCTGTGTGACGATCTCCTCTACAGCCAGTCTCCCAGTAGAGATGGAAAACATGAAGATCATAAGAGCCAACCTGGTCTTTCTGTTTATGCTCAGCTAGGACCAGAATGTCTGAAGAAGGATATTGAAGAGTGTCAAAATCTTGTTGTCCATGATCCTGCAAATATAGTGAATGATAACCCTTCAGAGATTCGTCTAAGTCAGCTGGAATTTAGTTCACAGGACAGTTTTATTTCCTGGGGATACAACAAGGCTGTGAACTAA


Promoter Sequence:
>Vu_14501::LG3:48740234-48742234(-)
TATGCAAAAAAATCAAAGCTTTTTGTGTAATGGTGGTTGGTGAGTTTGTCTCTCCGCAGTTTAGTGTTCTATAATTGATAGAAGATTCGAAGGTCTTACATGAGGTTATGTGAAGAATATTTTTTTTTCGTATTCTGGTTGATTTTCAGTGTTGGGTTGATCTCTAACTACCGTGGTAATAGTTTAAGATTGAAAGGCAAATGAAAAATCATGAAACCAATTAAAAATTTATCTTTCTTTTTTGGTTTTCTTTACCTTTTGAATGTTGACCTTATTATTTGATTTAACTTCGCCAAATTTGAATAAAGAGATCATCAACTATTACTTGCTTGTTTGCTGTTAACTTAAAAGGAAATAGCAGTCCACTGCCTAATATGTGTCGAGTTCTGAATTAAATGCTTAAATCCACGCAATGGCCTTATGCAGTTTTGCTTTCACAACCAAATAATAAACTTTTTATCTTGATAATGCCCTTGGTTATGCAGGCCATCATGGTTGGTTGACAAAAGTAGAATTGCGACCAAAATTAAATGTGCATCAGGAACATGTGATCCTGAAAAGATTATATGGAGCAGCAATCCTACAAAGCCTTGCCCAAATTGTCAACATGATATTGACAACAGTGATGTATGTGCAGTTTCTTTTTTAAAATTTCATTGTTTATTTCCTGATTTCATATCATCAGTAGGTCGGTACATTTTCTTTTGTTAGACATTGCATTTATTTATGTGGACTCCATTTCTCGTGTTCATTTTCAACTTCCCTTTAGTGTACTTTTATATACTTTAGCGTGAATAAGGATTTTATGCAAGTTTTGTTTGTATTTTGTAGTGATCCAGTAAGATCAGTTTAAATATTTTAATGTAACAAAAATGGAGAGGTTCAGCACTTATTCCGAAGTTGAGGCTTCCATGAATAGTAACTACGTGAGATTGGAGTTTCTGTTTTAACTGAACTAAATATAAATTTAAATGGGAAAGAATTTGAGTTTTGACTTATTACAGCTAATGCAAATGGCAACTTTTGTTCCATGTTAATTTCATTAGGAGTAACATTCATGTTCTATTTTATCAGATAAAGTACTAGTTCTTTGCCCTTACTTTCAGTTTCAAACTATTGCAGCGTAAGTCTATTACTTTTGGGTACGAGATGTGCTTATTTGCTGCTATTTCATCTTTTGTGTTCAATATCATTTGCTTGGACGTAAAAGTGCTCAATGTACTTATTCTACTCTAAAATGGTCATGGTTATCATGCAAAAAAATCATAGGTTATGGTTGAGTGCATGAAGCCGACATATCTGAGGATTGAAATAGGGCAATATATCAGGTCAATATTGAGCATACAATGAGTGAGTGACAGCCTGAAACCTATATCGGAAGATTGAAAATAGAACATTTGAATGACTATAAAGTATGCATTTTGTGGTGCTAAGTTGGTGTCTTTGCATTTAATAGCATGTAATGAAATGTGGTAATGTTATCTATACTTCCGTGGGTTTAGTTAGGTTGGAATTTCCTAACTCAAACTAAATGTCCTACACGATCTTTGTTGCTAGAGTATTTTCTTTTTGTTCTTTTCAGTTTTCATGCCACATATTTGAACTCCAAGAAAGATGTCGTAAAATTGGATTTAGCATTTAAAAGTTAAAACTGAAAAGCATAACGAGGTTCATTCCTTAATCCTATAGTGCAAGTCTAACAATTGAGTATGAATGCTTTGACATTTGATTTTTTTTTCTCGTGATAGGTAGCACAAGAGTGGCCTGGCTTACCAAAAGGTGTCAAATTTGATCCATCTGATCAAGAGATAATCTGGCACTTGCTTGCAAAAGTGGGGGTAGAAGGTTCCAAACCTCATCCTTTCATTGATGAATTTATTACTAGTCTTGAAGAAGATGATGGGATTTGCTATACTCATCCTAAAAGTTTACCTGGTTAGTAGTGCAAATTTTCCAAAATTTGAATTCTCAATTATTTTTCAATCAATACAATATAAGCT


Gene Sequence:
>Vu_14501(-)
ATGATGAAAATTTTAGGTATTAAGCAAGATGGAAGTGCTTCGTTCTTTTTTCATAGAGCAATCAAGGCTTACAACACTGGCAACCGAAAGCGTAGAAAGATAACAAGTCAAGATTTTGGTGAGGCCCGCTGGCACAAGACTGGAAAGACTAAACCAATTGTCTTGGGTGGGGCTCGAAAAGGATGGAAAAAGATTATGGTTCTGTATGAAAATAATATAGGAGGAGGAAAAGATGAAAAAACTAATTGGGTTATGCATGAATATCATCTAGGAGCAAAAGAAGATGAAAATGATGGGGAGTACATTTTCTCTAAAGTGTTTTACCAGCAACAAGTGAAATTGGGTGATAAAGATGATCAAGATGTTACTGAAGCAACTGAATCAACAATTGTGAAGGTGGTTCCAAACACTCCCAAATTGGTGACACTTGATCCTCCTTGCAACAAAAGGCATTGTGCAAATCTGGACCAAGGACAAGAAACACATAGTCTACTGGTAACACCTTCAACCGTATTCTCTTGTTATCAAATATTAGTTATTAATATTTTGCCATGAACACTATTGTTATTGTTTGTTTTGCTTATGTTATCGGTAGAGGAAATGTATAAAAAAATTTGATGAATGTACCGTTTTAAAATGTAGGTACATATTTGTCCTCGGTAGAAGTTCTTTACATTTACAAAGTTTAATATTTGTTTTCCTGTTAGTGACCAAATAGGTCATATAGGATGGTAGTGCTCTGGTATCATGTTGAGAATGGAGAAATTGAGAAAGAATATAATTGTCATGATTATAAAACTAAGTAGTTGATCTTATATATCAGGGGATATTAAATCTCCTCTATTTATCGTATTGATTCTTTTTTCTCAACATAAATAAAGCATGCATGCTGAACCAAAATGACTCTGTTTTAGCTTAATGTTCTTCTCTCATATGTTGTGGATCCTGTCTCAGCAAGTAAATGGTGGTTGGTTACACTCTTAGTCCCGGCACGTAAATTAACCATGCAGCTAAACTTCTAACACGTTTTTTTCTGAAGTTATGGTATTTCTTTTGCTAGGTGCTGCCTGCGATGATGTAGTTTAGTGAAATTATGAAATACCACTGACTGAATTTGATTATTCCTTTCTGTTTGTGTTCTGCTTCGTTCATTCCAAAGCTGTCTCAGATGGATTGTTTACATGAAATTCAAGATGATTGCCAAGAACTTGCAACTGAATCTCAAAATGAAGGGGTGGAAAATAAAGAAAGTAATGCTGAGGAAGGCTCGAAATGGTGGGACAGCCAGTCACAGAATATGTTGGATTCGCAACAACTGGTCGAAGCTCTGTCTCTGTGTGACGATCTCCTCTACAGCCAGTCTCCCAGTAGAGATGGAAAACATGAAGATCATAAGAGCCAACCTGGTCTTTCTGTTTATGCTCAGCTAGGACCAGAATGTCTGAAGAAGGATATTGAAGAGTGTCAAAATCTTGTTGTCCATGATCCTGCAAATATAGTGAATGATAACCCTTCAGAGATTCGTCTAAGTCAGCTGGTATTTTCGTGTTCCCAAATATTGCATGAAATTGAAATAATTTTAATGTCATTCTAATGCGTTTTCTTGTTTTTGTAGGAATTTAGTTCACAGGACAGTTTTATTTCCTGGGGATACAACAAGGCTGTGAACTAA