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ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14172 LG3 44521209 44524779 PREDICTED: putative disease resistance protein At3g14460
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 44521217 3_prime_UTR_variant
A/C 44521246 3_prime_UTR_variant
A/G,C 44521252 3_prime_UTR_variant
C/T 44521257 3_prime_UTR_variant
G/C 44521272 3_prime_UTR_variant
G/C 44521275 3_prime_UTR_variant
T/C 44521328 missense_variant p.Lys1139Glu
C/G 44521329 missense_variant p.Lys1138Asn
T/A,C 44521331 stop_gained p.Lys1138*
T/C,* 44521338 missense_variant p.Ile1135Met
T/A 44521344 synonymous_variant p.Val1133Val
C/G,* 44521349 missense_variant p.Asp1132His
C/G,T 44521351 missense_variant p.Arg1131Pro
C/G 44521358 missense_variant p.Asp1129His
T/C 44521391 missense_variant p.Lys1118Glu
T/A 44521398 synonymous_variant p.Arg1115Arg
C/T,* 44521401 synonymous_variant p.Gln1114Gln
G/C 44521403 missense_variant p.Gln1114Glu
T/G 44521405 missense_variant p.Glu1113Ala
C/T,G 44521407 synonymous_variant p.Leu1112Leu
C/*,T 44521420 missense_variant p.Gly1108Glu
C/T,* 44521421 missense_variant p.Gly1108Arg
G/C,T 44521422 missense_variant p.Asn1107Lys
T/C,G 44521424 missense_variant p.Asn1107Asp
A/T,C 44521429 missense_variant p.Val1105Gly
C/T,G 44521430 missense_variant p.Val1105Leu
T/A,G 44521435 missense_variant p.Tyr1103Phe
A/C 44521436 missense_variant p.Tyr1103Asp
G/A 44521438 missense_variant p.Ser1102Leu
C/T 44521460 missense_variant p.Glu1095Lys
T/A 44521467 missense_variant p.Leu1092Phe
T/G,A 44521488 missense_variant p.Lys1085Asn
C/A,G 44521497 missense_variant p.Trp1082Cys
C/A,G 44521498 missense_variant p.Trp1082Leu
A/T,* 44521499 missense_variant p.Trp1082Arg
A/G,* 44521504 missense_variant p.Phe1080Ser
A/T,* 44521505 missense_variant p.Phe1080Ile
T/C 44521515 synonymous_variant p.Ser1076Ser
C/A 44521523 stop_gained p.Glu1074*
A/C 44521528 missense_variant p.Leu1072Arg
G/A 44521536 synonymous_variant p.Tyr1069Tyr
T/C 44521551 synonymous_variant p.Leu1064Leu
A/T,C 44521567 missense_variant p.Ile1059Arg
A/T,C 44521579 missense_variant p.Val1055Gly
C/T,G 44521580 missense_variant p.Val1055Leu
G/A 44521582 missense_variant p.Ser1054Phe
A/T 44521583 missense_variant p.Ser1054Thr
A/T 44521584 synonymous_variant p.Leu1053Leu
C/G 44521588 missense_variant p.Cys1052Ser
C/T 44521643 missense_variant p.Ala1034Thr
C/T 44521656 synonymous_variant p.Ser1029Ser
A/T,* 44521711 missense_variant p.Ile1011Asn
C/G 44521713 synonymous_variant p.Leu1010Leu
G/C 44521717 missense_variant p.Thr1009Arg
T/A 44521723 missense_variant p.His1007Leu
G/C,A 44521724 missense_variant p.His1007Tyr
T/C 44521727 missense_variant p.Lys1006Glu
C/A 44521745 missense_variant p.Gly1000Cys
C/T 44521747 missense_variant p.Gly999Glu
C/T 44521748 missense_variant p.Gly999Arg
T/A,G 44521749 missense_variant p.Glu998Asp
G/T,A 44521755 missense_variant p.Phe996Leu
T/A 44521765 missense_variant p.Glu993Val
G/T 44521774 missense_variant p.Pro990Gln
G/A 44521775 missense_variant p.Pro990Ser
C/A 44521779 missense_variant p.Glu988Asp
C/T 44521784 missense_variant p.Glu987Lys
T/A 44521789 missense_variant p.Glu985Val
C/T 44521790 missense_variant p.Glu985Lys
A/C,* 44521796 missense_variant p.Ser983Ala
T/C 44521806 synonymous_variant p.Pro979Pro
A/G 44521816 missense_variant p.Met976Thr
A/C 44521818 missense_variant p.His975Gln
C/A 44521842 missense_variant p.Leu967Phe
A/C 44521848 synonymous_variant p.Pro965Pro
A/G 44521851 synonymous_variant p.Cys964Cys
T/A 44521857 missense_variant p.Gln962His
G/T 44521859 missense_variant p.Gln962Lys
T/G 44521860 synonymous_variant p.Ile961Ile
A/G 44521861 missense_variant p.Ile961Thr
T/A 44521863 missense_variant p.Lys960Asn
T/A,G 44521864 missense_variant p.Lys960Ile
T/C 44521865 missense_variant p.Lys960Glu
G/T 44521868 missense_variant p.Leu959Met
G/A,* 44521871 missense_variant p.His958Tyr
G/T 44521884 missense_variant p.His953Gln
G/A 44521906 missense_variant p.Thr946Met
C/A 44521927 missense_variant p.Ser939Ile
T/C 44521928 missense_variant p.Ser939Gly
T/A 44521933 missense_variant p.Gln937Leu
G/C,T 44521934 missense_variant p.Gln937Glu
A/G 44521935 synonymous_variant p.Leu936Leu
G/C 44521937 missense_variant p.Leu936Val
A/G,C 44521939 missense_variant p.Ile935Ser
C/A,* 44521941 missense_variant p.Glu934Asp
T/C,A 44521942 missense_variant p.Glu934Val
C/G,T 44521943 missense_variant p.Glu934Gln
A/C 44521965 synonymous_variant p.Leu926Leu
G/C 44521970 missense_variant p.Pro925Ala
G/T 44521974 synonymous_variant p.Ile923Ile
G/C 44521984 missense_variant p.Ser920Cys
A/T 44521991 missense_variant p.Cys918Ser
G/A 44521992 synonymous_variant p.Asp917Asp
C/A 44521994 missense_variant p.Asp917Tyr
C/T 44521999 missense_variant p.Ser915Asn
T/G,* 44522014 missense_variant p.His910Pro
C/T,A 44522031 missense_variant p.Glu904Asp
T/A 44522032 missense_variant p.Glu904Val
G/A,* 44522047 missense_variant p.Ala899Val
C/T,* 44522063 missense_variant p.Ala894Thr
C/T,* 44522075 missense_variant p.Glu890Lys
G/C,* 44522081 missense_variant p.His888Asp
T/G,C 44522089 missense_variant p.Lys885Arg
T/C,* 44522090 missense_variant p.Lys885Glu
A/T,* 44522096 missense_variant p.Ser883Thr
T/A,* 44522097 missense_variant p.Glu882Asp
T/G,* 44522098 missense_variant p.Glu882Ala
A/G,* 44522104 missense_variant p.Val880Ala
C/T,* 44522105 missense_variant p.Val880Ile
A/G,* 44522120 synonymous_variant p.Leu875Leu
G/A,* 44522123 missense_variant p.His874Tyr
C/T 44522133 synonymous_variant p.Lys870Lys
G/A,C 44522136 synonymous_variant p.Pro869Pro
G/C,T 44522147 missense_variant p.Gln866Glu
T/A 44522148 synonymous_variant p.Ile865Ile
T/C 44522150 missense_variant p.Ile865Val
G/T 44522152 stop_gained p.Ser864*
A/T,G 44522153 missense_variant p.Ser864Pro
A/T 44522156 missense_variant p.Phe863Ile
A/T 44522157 missense_variant p.Asp862Glu
T/A,G 44522158 missense_variant p.Asp862Val
C/A,G 44522159 missense_variant p.Asp862Tyr
C/T 44522161 missense_variant p.Arg861Gln
G/T 44522162 synonymous_variant p.Arg861Arg
G/A 44522165 synonymous_variant p.Leu860Leu
A/G 44522166 synonymous_variant p.Cys859Cys
A/T 44522178 synonymous_variant p.Gly855Gly
T/A 44522181 synonymous_variant p.Thr854Thr
C/T 44522186 missense_variant p.Val853Met
G/T 44522188 missense_variant p.Ala852Asp
C/T 44522189 missense_variant p.Ala852Thr
C/T 44522198 missense_variant p.Asp849Asn
G/C 44522222 missense_variant p.His841Asp
C/A 44522231 missense_variant p.Asp838Tyr
G/A 44522236 missense_variant p.Thr836Ile
T/A 44522247 missense_variant p.Lys832Asn
C/T 44522253 synonymous_variant p.Ser830Ser
G/T 44522260 missense_variant p.Ser828Tyr
G/A 44522273 missense_variant p.His824Tyr
C/T 44522284 missense_variant p.Gly820Asp
T/C 44522294 missense_variant p.Met817Val
C/T 44522300 missense_variant p.Gly815Arg
A/T 44522304 synonymous_variant p.Leu813Leu
T/C 44522308 missense_variant p.Lys812Arg
G/C 44522316 missense_variant p.Ser809Arg
C/G 44522317 missense_variant p.Ser809Thr
G/C,A 44522324 missense_variant p.His807Tyr
G/C 44522328 synonymous_variant p.Leu805Leu
A/T 44522339 missense_variant p.Phe802Ile
T/G 44522386 missense_variant p.Glu786Ala
G/A 44522391 synonymous_variant p.Ser784Ser
C/T 44522430 synonymous_variant p.Pro771Pro
G/A 44522446 missense_variant p.Thr766Ile
G/T,* 44522467 missense_variant p.Thr759Lys
C/A 44522488 missense_variant p.Arg752Leu
G/A 44522493 synonymous_variant p.Asn750Asn
T/C 44522520 synonymous_variant p.Ser741Ser
A/G 44522522 missense_variant p.Ser741Pro
C/T 44522528 missense_variant p.Val739Ile
T/C 44522543 missense_variant p.Ile734Val
T/C 44522549 missense_variant p.Asn732Asp
C/T 44522555 missense_variant p.Glu730Lys
C/T 44522559 synonymous_variant p.Arg728Arg
C/A 44522560 missense_variant p.Arg728Leu
T/G 44522562 synonymous_variant p.Leu727Leu
T/A,G 44522565 missense_variant p.Glu726Asp
C/T 44522567 missense_variant p.Glu726Lys
C/T 44522570 missense_variant p.Val725Met
A/T,C 44522595 synonymous_variant p.Val716Val
T/C 44522601 synonymous_variant p.Leu714Leu
T/C 44522608 missense_variant p.Tyr712Cys
C/G,A 44522610 synonymous_variant p.Ser711Ser
G/A 44522613 synonymous_variant p.Pro710Pro
C/T 44522636 missense_variant p.Asp703Asn
T/G 44522642 missense_variant p.Ile701Leu
G/C 44522644 missense_variant p.Thr700Arg
G/T 44522648 missense_variant p.Leu699Ile
A/T 44522649 missense_variant p.Ser698Arg
C/T 44522653 missense_variant p.Gly697Glu
G/C 44522660 missense_variant p.Leu695Val
T/C 44522662 missense_variant p.Asp694Gly
C/T 44522663 missense_variant p.Asp694Asn
C/T 44522669 missense_variant p.Glu692Lys
C/G 44522672 missense_variant p.Gly691Arg
T/C 44522673 synonymous_variant p.Leu690Leu
T/A 44522676 missense_variant p.Gln689His
A/T 44522683 missense_variant p.Phe687Tyr
T/A 44522690 missense_variant p.Ile685Phe
T/C 44522699 missense_variant p.Ser682Gly
T/C 44522703 synonymous_variant p.Glu680Glu
T/G 44522715 synonymous_variant p.Ser676Ser
T/C 44522719 missense_variant p.Asp675Gly
C/T 44522720 missense_variant p.Asp675Asn
G/A 44522725 missense_variant p.Thr673Met
T/A 44522726 missense_variant p.Thr673Ser
G/C 44522732 missense_variant p.Gln671Glu
A/G 44522733 synonymous_variant p.Leu670Leu
G/C,T 44522749 missense_variant p.Ala665Gly
G/A 44522753 synonymous_variant p.Leu664Leu
A/G 44522756 missense_variant p.Tyr663His
T/C 44522762 missense_variant p.Ile661Val
C/T,G 44522771 missense_variant p.Glu658Gln
A/C 44522772 synonymous_variant p.Val657Val
G/C,A 44522779 missense_variant p.Thr655Ile
C/T 44522783 missense_variant p.Gly654Ser
A/T 44522785 missense_variant p.Val653Glu
T/A 44522790 missense_variant p.Glu651Asp
A/G 44522796 synonymous_variant p.Arg649Arg
C/A 44522797 missense_variant p.Arg649Leu
G/T,A 44522798 missense_variant p.Arg649Cys
C/T 44522802 synonymous_variant p.Leu647Leu
G/A 44522805 synonymous_variant p.Asn646Asn
T/G,C 44522810 missense_variant p.Asn645Asp
C/G 44522816 missense_variant p.Glu643Gln
G/A 44522819 missense_variant p.His642Tyr
C/T 44522824 missense_variant p.Cys640Tyr
G/A 44522827 missense_variant p.Ser639Leu
A/G 44522828 missense_variant p.Ser639Pro
G/A 44522830 missense_variant p.Pro638Leu
G/T 44522831 missense_variant p.Pro638Thr
C/G 44522837 missense_variant p.Glu636Gln
T/C 44522841 synonymous_variant p.Leu634Leu
T/G,* 44522844 missense_variant p.Glu633Asp
C/T,* 44522846 missense_variant p.Glu633Lys
T/G,A 44522848 missense_variant p.Glu632Val
C/G,T 44522849 missense_variant p.Glu632Gln
T/A 44522854 missense_variant p.Tyr630Phe
A/G 44522855 missense_variant p.Tyr630His
C/G 44522859 synonymous_variant p.Leu628Leu
G/A 44522861 synonymous_variant p.Leu628Leu
T/A 44522863 missense_variant p.Gln627Leu
G/A 44522867 synonymous_variant p.Leu626Leu
A/G 44522882 missense_variant p.Tyr621His
A/G 44522887 missense_variant p.Leu619Ser
C/T 44522890 missense_variant p.Ser618Asn
G/A 44522898 synonymous_variant p.Asp615Asp
C/T 44522900 missense_variant p.Asp615Asn
A/G 44522901 synonymous_variant p.Pro614Pro
T/G,A 44522916 synonymous_variant p.Ala609Ala
G/T 44522917 missense_variant p.Ala609Glu
C/T 44522918 missense_variant p.Ala609Thr
A/T 44522927 missense_variant p.Ser606Thr
G/C 44522930 missense_variant p.Leu605Val
A/G 44522943 synonymous_variant p.Leu600Leu
T/C 44522956 missense_variant p.Asn596Ser
A/C 44522975 missense_variant p.Leu590Val
C/T 44522976 synonymous_variant p.Glu589Glu
A/C 44522988 synonymous_variant p.Arg585Arg
C/T 44522989 missense_variant p.Arg585His
G/C 44522990 missense_variant p.Arg585Gly
A/T,C 44522994 missense_variant p.Asn583Lys
T/A 44522995 missense_variant p.Asn583Ile
C/T 44522998 missense_variant p.Cys582Tyr
A/T 44522999 missense_variant p.Cys582Ser
C/G 44523009 synonymous_variant p.Val578Val
A/G 44523019 missense_variant p.Leu575Ser
G/A 44523038 synonymous_variant p.Leu569Leu
T/C 44523043 missense_variant p.Asn567Ser
T/C 44523044 missense_variant p.Asn567Asp
T/A 44523045 synonymous_variant p.Ile566Ile
G/*,C 44523068 missense_variant p.Arg559Gly
G/C,* 44523080 missense_variant p.Arg555Gly
A/T,* 44523083 missense_variant p.Trp554Arg
G/A,* 44523089 missense_variant p.Arg552Trp
C/G 44523097 missense_variant p.Arg549Pro
A/C 44523099 synonymous_variant p.Thr548Thr
G/A 44523106 missense_variant p.Thr546Ile
G/A 44523110 missense_variant p.His545Tyr
G/A 44523121 missense_variant p.Thr541Ile
T/A 44523134 missense_variant p.Ser537Cys
C/T 44523157 missense_variant p.Gly529Asp
C/A 44523158 missense_variant p.Gly529Cys
C/A 44523169 missense_variant p.Cys525Phe
C/T 44523193 missense_variant p.Gly517Asp
T/C,A 44523198 synonymous_variant p.Pro515Pro
T/G 44523219 synonymous_variant p.Ile508Ile
A/G 44523234 synonymous_variant p.Cys503Cys
A/G 44523255 synonymous_variant p.Asn496Asn
T/C 44523258 synonymous_variant p.Leu495Leu
G/T 44523260 missense_variant p.Leu495Ile
T/C 44523272 missense_variant p.Met491Val
G/T,C 44523273 missense_variant p.Ile490Met
A/C 44523274 missense_variant p.Ile490Ser
C/A,* 44523282 missense_variant p.Lys487Asn
C/T,* 44523287 missense_variant p.Glu486Lys
C/T,* 44523289 missense_variant p.Gly485Glu
A/G,* 44523294 synonymous_variant p.Phe483Phe
A/T,* 44523296 missense_variant p.Phe483Ile
A/C,* 44523303 missense_variant p.Asp480Glu
A/T 44523316 missense_variant p.Phe476Tyr
G/T,C 44523318 synonymous_variant p.Ser475Ser
A/T,C 44523324 synonymous_variant p.Ser473Ser
C/T,G 44523350 missense_variant p.Glu465Gln
A/C 44523351 synonymous_variant p.Gly464Gly
T/C 44523362 missense_variant p.Lys461Glu
G/C 44523377 missense_variant p.Gln456Glu
A/C 44523379 missense_variant p.Leu455Arg
G/C 44523380 missense_variant p.Leu455Val
C/G 44523389 missense_variant p.Glu452Gln
A/T 44523391 missense_variant p.Leu451Gln
T/C 44523399 synonymous_variant p.Glu448Glu
C/G 44523401 missense_variant p.Glu448Gln
C/T 44523405 missense_variant p.Met446Ile
T/A 44523407 missense_variant p.Met446Leu
A/C,G 44523413 missense_variant p.Leu444Val
T/C 44523415 missense_variant p.Gln443Arg
A/T 44523421 stop_gained p.Leu441*
C/G 44523424 missense_variant p.Trp440Ser
C/T 44523426 synonymous_variant p.Glu439Glu
T/G,C 44523431 missense_variant p.Lys438Glu
G/C 44523432 missense_variant p.Asp437Glu
A/G 44523437 missense_variant p.Phe436Leu
A/C 44523443 missense_variant p.Tyr434Asp
G/A 44523474 synonymous_variant p.Cys423Cys
G/A 44523490 missense_variant p.Ser418Phe
G/A 44523507 synonymous_variant p.Ser412Ser
G/A 44523525 synonymous_variant p.Leu406Leu
T/C 44523542 missense_variant p.Asn401Asp
G/A 44523547 missense_variant p.Ser399Leu
C/T 44523554 missense_variant p.Asp397Asn
T/A 44523558 synonymous_variant p.Ile395Ile
T/C 44523581 missense_variant p.Lys388Glu
T/C 44523585 synonymous_variant p.Glu386Glu
C/T 44523587 missense_variant p.Glu386Lys
G/C,A 44523589 missense_variant p.Ser385Leu
A/G 44523591 synonymous_variant p.Leu384Leu
G/A 44523606 synonymous_variant p.His379His
G/A 44523608 missense_variant p.His379Tyr
G/A 44523614 synonymous_variant p.Leu377Leu
T/A 44523617 missense_variant p.Ser376Cys
T/G 44523670 missense_variant p.Lys358Thr
T/A,G 44523687 missense_variant p.Glu352Asp
A/G 44523692 missense_variant p.Ser351Pro
G/A 44523693 synonymous_variant p.Asp350Asp
C/G 44523702 synonymous_variant p.Pro347Pro
G/C 44523709 missense_variant p.Ala345Gly
C/T 44523731 missense_variant p.Ala338Thr
G/A 44523732 synonymous_variant p.Phe337Phe
C/T 44523740 missense_variant p.Asp335Asn
T/A 44523748 missense_variant p.Tyr332Phe
A/T 44523749 missense_variant p.Tyr332Asn
C/G 44523765 missense_variant p.Gln326His
A/G 44523770 synonymous_variant p.Leu325Leu
G/C 44523773 missense_variant p.Leu324Val
C/T 44523777 synonymous_variant p.Lys322Lys
G/A 44523799 missense_variant p.Ala315Val
C/A 44523813 synonymous_variant p.Arg310Arg
T/G 44523827 missense_variant p.Ile306Leu
A/C 44523845 missense_variant p.Cys300Gly
G/A 44523857 synonymous_variant p.Leu296Leu
A/G 44523858 synonymous_variant p.Pro295Pro
A/G 44523870 synonymous_variant p.Asp291Asp
T/C 44523880 missense_variant p.Lys288Arg
A/C 44523882 synonymous_variant p.Ser287Ser
A/G 44523936 synonymous_variant p.Leu269Leu
C/T,G 44523941 missense_variant p.Glu268Gln
C/T 44523972 synonymous_variant p.Gln257Gln
G/C 44523979 missense_variant p.Thr255Ser
G/C,T 44523988 missense_variant p.Thr252Ser
C/A 44524007 missense_variant p.Asp246Tyr
T/G 44524014 synonymous_variant p.Ala243Ala
G/C 44524015 missense_variant p.Ala243Gly
G/A 44524049 missense_variant p.Pro232Ser
A/G 44524051 missense_variant p.Val231Ala
G/C 44524073 missense_variant p.His224Asp
G/T 44524096 missense_variant p.Pro216Gln
G/A 44524101 synonymous_variant p.Asn214Asn
T/C 44524102 missense_variant p.Asn214Ser
C/T 44524137 synonymous_variant p.Gly202Gly
G/T 44524173 missense_variant p.Asn190Lys
G/A 44524191 synonymous_variant p.Leu184Leu
G/A 44524202 missense_variant p.Leu181Phe
A/C,G 44524206 missense_variant p.Phe179Leu
T/G 44524213 missense_variant p.Lys177Thr
T/G 44524219 missense_variant p.Asp175Ala
A/T 44524231 missense_variant p.Phe171Tyr
T/A 44524239 missense_variant p.Arg168Ser
G/T 44524242 missense_variant p.Asp167Glu
C/A 44524282 missense_variant p.Gly154Val
C/G 44524283 missense_variant p.Gly154Arg
C/A 44524306 missense_variant p.Gly146Val
C/T 44524314 synonymous_variant p.Leu143Leu
C/T 44524318 missense_variant p.Gly142Asp
C/T 44524319 missense_variant p.Gly142Ser
G/A,C 44524325 missense_variant p.Leu140Phe
C/T 44524346 missense_variant p.Glu133Lys
C/A 44524436 missense_variant p.Ala103Ser
C/T 44524438 missense_variant p.Ser102Asn
A/G 44524443 synonymous_variant p.Ser100Ser
C/T 44524446 synonymous_variant p.Glu99Glu
A/G 44524449 synonymous_variant p.Ala98Ala
G/A 44524533 synonymous_variant p.Leu70Leu
T/A 44524548 missense_variant p.Gln65His
T/C 44524549 missense_variant p.Gln65Arg
A/G 44524582 missense_variant p.Phe54Ser
A/C 44524597 missense_variant p.Ile49Ser
G/C 44524641 missense_variant p.Asn34Lys
T/A 44524663 missense_variant p.Tyr27Phe
A/C 44524664 missense_variant p.Tyr27Asp
T/A 44524668 synonymous_variant p.Arg25Arg
A/G 44524671 synonymous_variant p.Ser24Ser
A/T 44524673 missense_variant p.Ser24Thr
G/A 44524683 synonymous_variant p.Asp20Asp
G/A 44524686 synonymous_variant p.Ile19Ile
T/A 44524689 synonymous_variant p.Thr18Thr
C/T 44524696 missense_variant p.Arg16Gln
G/C 44524697 missense_variant p.Arg16Gly
A/G 44524701 synonymous_variant p.Phe14Phe
A/T 44524709 missense_variant p.Ser12Thr
A/T 44524713 synonymous_variant p.Leu10Leu
C/T 44524718 missense_variant p.Val9Ile
C/G 44524727 missense_variant p.Val6Leu
A/C 44524729 missense_variant p.Met5Arg
C/T 44524733 missense_variant p.Glu4Lys
T/C 44524745 5_prime_UTR_premature_start_codon_gain_variant
C/G,A 44524748 5_prime_UTR_variant
G/T 44524755 5_prime_UTR_variant
A/G 44524763 5_prime_UTR_variant
G/A 44524764 5_prime_UTR_variant
A/G 44524770 5_prime_UTR_variant
A/T 44524774 5_prime_UTR_variant
A/T 44524775 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14172.1
MAAEMVTGVLVSTFLRRTIDTLASRLYDIFHQENHKKQLSNLKMKLLAIDVVAFEAEQKQFTDPQVRDWLLRAKDVVIDAEDLLDEIDYELSKTQVEAESQSASKKVWNSLDSSFFEIEFDSMREKVIEDLEELAIESDLLGLKKGGGVGVGSGSGSKLTHTSLPNDRVIFGRDDDKEFVLNWLTSDTHNNLSILSIVGMGGMGKTSLAQHVFNDPRLQEANFHTKVWVSVPQEFDVLKVSRAILDTITGSTDHTIQHEVIQKRLKEELMGKKFLLVLDDVWNERPSKWEDVQKPLVFGCQGSRIIVTTRSEKVAVAMRSEKRLLQVLKKDYCWDLFAKHAFENANPQPDSEFIEIGKKIVEKCNGLPLALKTMGSLLHNKSSLSEWKSIMKSEIWDFSENESDILPALRLSYFHLPSHLKKCFAFCALFPKGYWFDKEWLIQLWMAENFLENPLQKKSPKEVGEEYCNDLLSWSFFQQDSRFGGEKCFIMHDLLNDLAKYVCEDICIRLGVDEPKGIPKTTRHCSFSGSGFDGFGSSIDTQKLHTFTRTNRDWRWDWRWDCKMSINDLFSRFKLIRVLSLCNCRSLTELPKSVGNLKHLRSLDLSHTAIEKLPDSISLLYKLQILQLNYCEELKELPSCLHELNNLRRLELVGTGVENVIAYLAKLKNLQVTMDSFQVEKSKEIYFQQLGELDLHGSLTIDDLQNIENPSYALEVDLKNKPHLVELRLEWNFIGSSSVDSEKAEDVIENLRPSKYLKTLSIRNYTGKQFPDWLLHNSLPNLVSLELEGCESCQRLPPLGLFLFLKHLSIAKLDGIMSIGADFHGNNSSSFKSLETLDFSHMRQWEKWDCQAVTGAFPCLRDFSIQNCPKLKGHLPKFVVLESLKVIHCEQLEALIVSAVRVEELSICSHRESISDDCVSLRIFPLDFFPTTLEILQLSGFPNLQTISQNHVHNHLLHLKIQECPKLESLPANMHMLLPSLSSLEIEECPRLEESFSEGGLPLNLKHITLINCFRLVGSLKRALGDSPSLRSLAVEKVEAECFPDEGLLPLCLSVLIIIDCQNLKKLNYKGLLELSSLRFLWLGKCPNLQCLPEEGLPKSISYLVINGCPLLEQRCNKEGGEDWEKISDIRDVYINGKKFV*


CDS Sequence:
>Vu_14172.1
ATGGCAGCAGAAATGGTTACCGGTGTTCTTGTTTCTACTTTTCTCCGGAGGACAATCGACACTTTGGCTTCTCGACTTTACGACATATTTCATCAAGAAAACCACAAGAAGCAACTCAGCAACTTGAAGATGAAGCTGCTAGCCATTGATGTTGTGGCGTTTGAAGCAGAACAAAAGCAGTTCACAGATCCACAAGTCAGAGATTGGCTCCTCAGGGCCAAAGATGTTGTGATTGATGCAGAAGATCTCTTGGATGAGATAGATTATGAACTCTCCAAAACCCAAGTGGAAGCTGAGTCTCAGAGTGCATCTAAGAAGGTGTGGAATTCCCTCGACTCTTCTTTCTTTGAAATTGAATTTGATTCCATGAGGGAAAAAGTCATTGAGGACCTAGAAGAACTTGCAATCGAAAGCGATCTTCTAGGTTTGAAAAAGGGTGGTGGTGTTGGGGTTGGATCAGGATCCGGTAGTAAATTAACACATACATCTTTGCCAAATGACAGAGTTATCTTTGGCAGAGATGATGACAAAGAATTTGTCCTTAACTGGCTCACATCGGACACTCACAACAACCTATCTATACTTTCTATTGTGGGCATGGGTGGGATGGGTAAGACCTCTCTTGCCCAACATGTATTCAACGACCCAAGGCTTCAAGAAGCTAACTTTCATACTAAAGTTTGGGTCAGTGTTCCACAGGAATTTGATGTTCTCAAAGTATCAAGAGCAATTCTTGACACAATAACTGGTTCCACTGATCATACTATACAGCATGAAGTAATTCAGAAAAGACTGAAAGAAGAACTTATGGGAAAGAAATTTCTTCTCGTTTTGGATGATGTTTGGAACGAAAGACCATCTAAATGGGAAGATGTGCAGAAGCCTCTAGTTTTCGGATGCCAAGGCAGTAGAATTATTGTCACTACACGGAGTGAGAAAGTTGCTGTTGCCATGCGATCAGAAAAGCGCCTCTTGCAGGTATTAAAAAAAGATTATTGTTGGGACTTGTTCGCAAAGCATGCATTCGAAAATGCTAATCCGCAACCAGACTCAGAATTCATAGAGATTGGTAAGAAGATAGTTGAAAAATGTAATGGACTTCCTTTAGCCTTAAAAACTATGGGAAGTCTATTACACAATAAATCATCCCTTTCGGAATGGAAAAGTATTATGAAGAGTGAGATATGGGATTTTTCAGAAAATGAAAGTGATATACTCCCTGCTTTAAGACTGAGCTATTTCCACCTTCCTTCTCATCTGAAGAAATGCTTTGCTTTTTGTGCCTTATTTCCCAAAGGTTATTGGTTTGACAAGGAGTGGTTAATTCAATTGTGGATGGCTGAAAATTTCCTAGAAAACCCTCTACAGAAAAAGAGTCCTAAAGAAGTTGGTGAAGAATATTGCAATGATCTATTATCTTGGTCCTTCTTTCAACAAGATTCAAGATTTGGAGGGGAAAAGTGTTTTATCATGCATGACCTTCTAAATGATTTGGCAAAATACGTCTGTGAAGACATATGCATAAGGTTAGGAGTTGATGAACCAAAAGGTATACCCAAAACAACCCGTCATTGTTCATTTTCAGGCTCAGGTTTTGATGGGTTTGGGAGTTCGATTGATACTCAAAAGTTGCATACATTTACTCGAACAAATCGGGATTGGCGTTGGGATTGGCGTTGGGATTGCAAGATGTCCATAAATGACCTGTTCTCCAGATTTAAGTTAATACGTGTGTTATCTTTGTGTAATTGTCGTAGCCTTACGGAGTTGCCTAAATCTGTAGGAAATCTTAAGCATCTTCGTTCATTAGATCTATCCCATACTGCAATAGAAAAACTACCTGACTCAATAAGTTTACTCTACAAGTTGCAAATACTGCAGCTGAACTATTGTGAAGAATTAAAGGAGCTTCCCTCATGTTTACATGAACTCAACAACTTGCGTCGTCTTGAATTAGTAGGTACTGGAGTTGAAAATGTGATAGCATATCTGGCAAAGTTGAAGAATCTTCAAGTAACGATGGATTCATTTCAAGTTGAAAAAAGTAAGGAAATCTATTTTCAGCAATTAGGAGAACTCGATCTTCATGGAAGTCTAACAATTGATGATCTGCAGAATATTGAGAATCCCTCGTATGCATTAGAAGTTGATTTGAAGAACAAACCACACCTTGTGGAACTACGGTTAGAATGGAATTTCATTGGCAGCTCCTCTGTTGATTCAGAAAAAGCTGAGGATGTAATTGAGAACCTACGTCCTTCAAAATATTTGAAGACGTTGTCAATAAGGAACTATACTGGTAAACAATTTCCGGATTGGTTACTTCATAATTCATTACCGAATCTGGTGTCCTTAGAATTGGAGGGATGTGAATCTTGCCAACGTTTACCTCCGCTTGGACTTTTTCTATTTCTCAAGCACTTGAGCATTGCAAAACTTGATGGGATAATGAGTATTGGTGCTGATTTTCATGGGAACAACTCTTCTTCGTTTAAATCCCTTGAAACATTGGATTTCTCCCATATGAGGCAATGGGAAAAGTGGGACTGCCAAGCTGTGACAGGTGCTTTTCCATGTCTACGAGATTTTTCAATACAAAATTGTCCCAAGCTGAAAGGACACTTGCCAAAGTTTGTTGTTTTAGAATCTCTAAAAGTGATTCACTGCGAACAACTTGAAGCTTTGATTGTCAGTGCTGTAAGAGTTGAAGAGTTGTCCATTTGTTCACATCGGGAGTCAATAAGTGATGACTGTGTCTCTCTAAGGATCTTTCCACTTGATTTCTTCCCAACAACACTCGAGATTCTTCAACTCAGTGGATTTCCTAATCTACAGACGATTTCACAGAATCATGTTCACAATCATCTCTTGCATCTGAAAATACAAGAGTGTCCTAAATTGGAATCATTGCCTGCAAACATGCATATGCTGCTTCCATCTCTCTCATCGCTAGAGATAGAAGAGTGTCCAAGACTTGAGGAGTCGTTCTCTGAAGGAGGTTTGCCATTAAATCTAAAACACATCACACTGATTAATTGCTTTAGACTTGTTGGCTCACTCAAAAGAGCTTTAGGAGACAGTCCTTCGTTGAGAAGTTTAGCGGTTGAAAAAGTAGAGGCGGAATGTTTTCCTGATGAAGGTTTGCTTCCACTCTGTCTTTCTGTACTAATAATAATAGATTGTCAAAATCTAAAAAAACTGAACTACAAGGGTCTCTTAGAACTCTCATCTCTTCGATTTCTGTGGCTTGGTAAATGTCCCAACCTCCAATGCTTACCAGAGGAGGGTCTTCCCAAATCAATTTCATATCTTGTTATAAACGGATGTCCTTTGCTGGAACAGCGATGCAACAAAGAAGGAGGCGAAGACTGGGAAAAGATTTCTGACATTCGAGATGTATATATAAATGGTAAGAAATTTGTTTAA


Promoter Sequence:
>Vu_14172::LG3:44524779-44526779(-)
CCCGAAAAGATTTGCATTCACACAATAACATATTGTGACAATTGATTATCATTTAAGATAATCGATTATCTTAGTGAAAAATTCTCAAATTCGTCCCACAAGAAAGGATAATCGATTATCATCCCAAATAATCGATTATTCCCGAAACCAAACTAAAAATTGTGCAAATAATCGATTATAAGTAATGATAATCGATTATTGTCAAATCGAAACACATCCTTGACATAATTCAAGCATTCAGAACATACATACTACAACCCTAGGTCACGAGAAAACATACCCAAAGCATCATGCACACATTCAAACCTCACATGCCTTTATAAACAAACCCTAGTACACATATTACATCACTTGAATCATCCAAAACTCATCATTATGCGGATTATAACCCAAAAACCCATCATACTGCATATGCACATCATATTATCCTTATATTATGTATTTGCATGGTAAAACTCTCAAATATCATAACTTTGCTCTTCCTTAGTATCAAACCCTATTATGGAATAACCTAAGCAAAACATACATAATACATTCATAGAAAAACCATCACAAACATTACATAAACCATATCCTCATGCTTACACAAACTCTTACACAATCATAATCACATATGATTATAACCAGAATTATCTACATCGAAACAAAATTTATTAATCAAGGTTTTTAAATAATAGTCTTCCAAAAATGTGTGATTTTAGAAAAAATGACGGTTGCATATTGCAAATCACTTATATCTAGGTTGTTTTCCACCATAAACAAAAGTTAGTTTAGTTTAAATGTAAGTTAAAAAATAAGAACTTACAGAAATTATTATAACAGAAAGAAAAAAAAAAGCAAAGGAATTATACAGAAAGTTGAATATTCTTTCTTATCACAGGAACAACAAACATTTACGTACGTCATGTAATACATGGACGTACCAAAAAAGAGAAAAAACTATAAAAGTACATAGTTGCGTAATAGTTATAAATAGAAAAAAAAATTACTTTTTCTTTACTTTTTTTCTTCAGGAGCATTTATATAAAATTATAGAAAATATCTTTTTAACAAATTTTTTTGATAATTTTTTTATAATAATCTACATGATAGTGTGTGATTGGTCCGTTTCAAATATACGGAATAATAAAATAATAATATATAATTTATTATCAAAAAATTATTAAAAAAATTTGTTAAAATATCGGAGTCCTGTAAAACTATATACTAAATAAAAGGTACTATTTCCATAATGTATAATTTCATCGACAACCATTGAATAAACCATTGTCCGAATTCGGCGTGCTTTGCAAAATTACTTTTTAGAAATTTGTAATAAATTAAGTTAATATCTGCTTAATTATATAGAATGTGTGTTTAAATAGTTTATATTTGCTTAATAAAAAAAGTCGCACAAGTTTAAAAAAAACGAAAAAAAAACGAGAGATTAATATGCCCTTGAACTTTTTTATTCTATTTTTATTTCATTTTTAATTTCTTTTACTTTTCTCAATACATCTCTCATCACAAGATATATCACTTTTTTTTTTCTCTCTCTTTCTTTTATTTTTTTAATCCGATTATATCATTACATATATCACTGGTTTGTTATCTTTCAATAATTTACAACTATTTTCTCTTTTTTGTCTTTTCTATCTCATTTCTTAGCTTTATTATTATTATTATCTCATTATTCTATGTAATCATTCTCTTTTTTCTTGTTTCTACTCCATTCACTCGAAGACATGGAGGATGGGGTTGCGATTCATTTTCAACTATTGTACCTAATAATTGACAATTCTTAAATAGTATAGGAAAAGTTGGAAACCTACACCTTAACACAACCACTCATTCATTGATGGTAGTGGAGTACAACATGTGAATAACAGTGCTGTCGGAAGACTTAATAATCTTTATTGGTTGTTGACGAAAAAGTTCAAACTTAATTCAAAAATTACCTTATTAACATTATTTCCATTGCACTGCACCTAGTCAAAGGCATAAGCTTCACTTCAAATCTC


Gene Sequence:
>Vu_14172(-)
ACAGTTTCATTCATCCTCTCTCTTCCCTATTGTTATCATGGCAGCAGAAATGGTTACCGGTGTTCTTGTTTCTACTTTTCTCCGGAGGACAATCGACACTTTGGCTTCTCGACTTTACGACATATTTCATCAAGAAAACCACAAGAAGCAACTCAGCAACTTGAAGATGAAGCTGCTAGCCATTGATGTTGTGGCGTTTGAAGCAGAACAAAAGCAGTTCACAGATCCACAAGTCAGAGATTGGCTCCTCAGGGCCAAAGATGTTGTGATTGATGCAGAAGATCTCTTGGATGAGATAGATTATGAACTCTCCAAAACCCAAGTGGAAGCTGAGTCTCAGAGTGCATCTAAGAAGGTGTGGAATTCCCTCGACTCTTCTTTCTTTGAAATTGAATTTGATTCCATGAGGGAAAAAGTCATTGAGGACCTAGAAGAACTTGCAATCGAAAGCGATCTTCTAGGTTTGAAAAAGGGTGGTGGTGTTGGGGTTGGATCAGGATCCGGTAGTAAATTAACACATACATCTTTGCCAAATGACAGAGTTATCTTTGGCAGAGATGATGACAAAGAATTTGTCCTTAACTGGCTCACATCGGACACTCACAACAACCTATCTATACTTTCTATTGTGGGCATGGGTGGGATGGGTAAGACCTCTCTTGCCCAACATGTATTCAACGACCCAAGGCTTCAAGAAGCTAACTTTCATACTAAAGTTTGGGTCAGTGTTCCACAGGAATTTGATGTTCTCAAAGTATCAAGAGCAATTCTTGACACAATAACTGGTTCCACTGATCATACTATACAGCATGAAGTAATTCAGAAAAGACTGAAAGAAGAACTTATGGGAAAGAAATTTCTTCTCGTTTTGGATGATGTTTGGAACGAAAGACCATCTAAATGGGAAGATGTGCAGAAGCCTCTAGTTTTCGGATGCCAAGGCAGTAGAATTATTGTCACTACACGGAGTGAGAAAGTTGCTGTTGCCATGCGATCAGAAAAGCGCCTCTTGCAGGTATTAAAAAAAGATTATTGTTGGGACTTGTTCGCAAAGCATGCATTCGAAAATGCTAATCCGCAACCAGACTCAGAATTCATAGAGATTGGTAAGAAGATAGTTGAAAAATGTAATGGACTTCCTTTAGCCTTAAAAACTATGGGAAGTCTATTACACAATAAATCATCCCTTTCGGAATGGAAAAGTATTATGAAGAGTGAGATATGGGATTTTTCAGAAAATGAAAGTGATATACTCCCTGCTTTAAGACTGAGCTATTTCCACCTTCCTTCTCATCTGAAGAAATGCTTTGCTTTTTGTGCCTTATTTCCCAAAGGTTATTGGTTTGACAAGGAGTGGTTAATTCAATTGTGGATGGCTGAAAATTTCCTAGAAAACCCTCTACAGAAAAAGAGTCCTAAAGAAGTTGGTGAAGAATATTGCAATGATCTATTATCTTGGTCCTTCTTTCAACAAGATTCAAGATTTGGAGGGGAAAAGTGTTTTATCATGCATGACCTTCTAAATGATTTGGCAAAATACGTCTGTGAAGACATATGCATAAGGTTAGGAGTTGATGAACCAAAAGGTATACCCAAAACAACCCGTCATTGTTCATTTTCAGGCTCAGGTTTTGATGGGTTTGGGAGTTCGATTGATACTCAAAAGTTGCATACATTTACTCGAACAAATCGGGATTGGCGTTGGGATTGGCGTTGGGATTGCAAGATGTCCATAAATGACCTGTTCTCCAGATTTAAGTTAATACGTGTGTTATCTTTGTGTAATTGTCGTAGCCTTACGGAGTTGCCTAAATCTGTAGGAAATCTTAAGCATCTTCGTTCATTAGATCTATCCCATACTGCAATAGAAAAACTACCTGACTCAATAAGTTTACTCTACAAGTTGCAAATACTGCAGCTGAACTATTGTGAAGAATTAAAGGAGCTTCCCTCATGTTTACATGAACTCAACAACTTGCGTCGTCTTGAATTAGTAGGTACTGGAGTTGAAAATGTGATAGCATATCTGGCAAAGTTGAAGAATCTTCAAGTAACGATGGATTCATTTCAAGTTGAAAAAAGTAAGGAAATCTATTTTCAGCAATTAGGAGAACTCGATCTTCATGGAAGTCTAACAATTGATGATCTGCAGAATATTGAGAATCCCTCGTATGCATTAGAAGTTGATTTGAAGAACAAACCACACCTTGTGGAACTACGGTTAGAATGGAATTTCATTGGCAGCTCCTCTGTTGATTCAGAAAAAGCTGAGGATGTAATTGAGAACCTACGTCCTTCAAAATATTTGAAGACGTTGTCAATAAGGAACTATACTGGTAAACAATTTCCGGATTGGTTACTTCATAATTCATTACCGAATCTGGTGTCCTTAGAATTGGAGGGATGTGAATCTTGCCAACGTTTACCTCCGCTTGGACTTTTTCTATTTCTCAAGCACTTGAGCATTGCAAAACTTGATGGGATAATGAGTATTGGTGCTGATTTTCATGGGAACAACTCTTCTTCGTTTAAATCCCTTGAAACATTGGATTTCTCCCATATGAGGCAATGGGAAAAGTGGGACTGCCAAGCTGTGACAGGTGCTTTTCCATGTCTACGAGATTTTTCAATACAAAATTGTCCCAAGCTGAAAGGACACTTGCCAAAGTTTGTTGTTTTAGAATCTCTAAAAGTGATTCACTGCGAACAACTTGAAGCTTTGATTGTCAGTGCTGTAAGAGTTGAAGAGTTGTCCATTTGTTCACATCGGGAGTCAATAAGTGATGACTGTGTCTCTCTAAGGATCTTTCCACTTGATTTCTTCCCAACAACACTCGAGATTCTTCAACTCAGTGGATTTCCTAATCTACAGACGATTTCACAGAATCATGTTCACAATCATCTCTTGCATCTGAAAATACAAGAGTGTCCTAAATTGGAATCATTGCCTGCAAACATGCATATGCTGCTTCCATCTCTCTCATCGCTAGAGATAGAAGAGTGTCCAAGACTTGAGGAGTCGTTCTCTGAAGGAGGTTTGCCATTAAATCTAAAACACATCACACTGATTAATTGCTTTAGACTTGTTGGCTCACTCAAAAGAGCTTTAGGAGACAGTCCTTCGTTGAGAAGTTTAGCGGTTGAAAAAGTAGAGGCGGAATGTTTTCCTGATGAAGGTTTGCTTCCACTCTGTCTTTCTGTACTAATAATAATAGATTGTCAAAATCTAAAAAAACTGAACTACAAGGGTCTCTTAGAACTCTCATCTCTTCGATTTCTGTGGCTTGGTAAATGTCCCAACCTCCAATGCTTACCAGAGGAGGGTCTTCCCAAATCAATTTCATATCTTGTTATAAACGGATGTCCTTTGCTGGAACAGCGATGCAACAAAGAAGGAGGCGAAGACTGGGAAAAGATTTCTGACATTCGAGATGTATATATAAATGGTAAGAAATTTGTTTAATTATGTTTAATGGTAGGGATAGTTTAATAGTGGTGTATGAACTACTTTTCCTGTTGGTAGTCCTTTCATGTAACAAATTACACTTCCATGAAATTTTTTTAACACTAT

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