Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14088 LG3 43164910 43167265 PREDICTED: trihelix transcription factor ASIL1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 43164938 missense_variant p.Thr366Ala
T/C 43164995 missense_variant p.Ile347Val
A/G 43165002 synonymous_variant p.Ser344Ser
G/A 43165007 missense_variant p.Arg343Trp
G/A 43165044 synonymous_variant p.His330His
C/T 43165103 missense_variant p.Ala311Thr
G/A 43165175 intron_variant
G/T 43165219 intron_variant
C/T 43165316 intron_variant
C/T 43165405 intron_variant
G/T 43165559 synonymous_variant p.Ala292Ala
C/A 43165581 missense_variant p.Arg285Ile
C/T 43165623 missense_variant p.Arg271Lys
G/A 43165631 synonymous_variant p.Ala268Ala
A/G 43165668 missense_variant p.Met256Thr
A/G 43165706 synonymous_variant p.Asn243Asn
T/A 43165751 synonymous_variant p.Pro228Pro
C/T 43165785 missense_variant p.Arg217Lys
A/T 43165816 missense_variant p.Leu207Ile
T/G 43165841 intron_variant
G/A 43165909 intron_variant
G/A 43165915 intron_variant
T/G 43166025 intron_variant
A/T 43166047 intron_variant
G/A 43166080 intron_variant
A/G 43166084 intron_variant
C/T 43166306 intron_variant
T/C 43166323 intron_variant
T/C 43166362 intron_variant
C/T 43166409 intron_variant
G/A 43166684 synonymous_variant p.Ser194Ser
C/A 43166723 synonymous_variant p.Pro181Pro
C/G 43166753 synonymous_variant p.Ser171Ser
T/C 43166783 synonymous_variant p.Pro161Pro
A/G 43166789 synonymous_variant p.Ser159Ser
A/C 43166798 synonymous_variant p.Pro156Pro
T/C 43166858 synonymous_variant p.Glu136Glu
C/A 43166870 synonymous_variant p.Ser132Ser
G/T 43166942 synonymous_variant p.Thr108Thr
A/G 43166972 synonymous_variant p.Ala98Ala
G/C 43166993 synonymous_variant p.Gly91Gly
T/G 43167003 missense_variant p.Lys88Thr
T/A 43167132 missense_variant p.Glu45Val
A/G 43167158 synonymous_variant p.His36His
T/G,* 43167198 missense_variant p.Gln23Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14088.1
MGVKQQGMMEEEKEETTNHNLEQNKNQNLNLDHNNHPSNTLPIKEESGFRSKGFGSGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSARANCTKSPKTSTQCKNKVESMKKRYRSESATAEHPSSWPLYSRLDLLLRGTGPLLSSPPPPPLAVPPSSAEPPQQSPPSEPLAVVQNSNGSNGVDDKLVKEDVLGEKCCEEVCRKNPLETDSSTPAVYSNKKEKRKKKVNDEKRRGRRRKEYMEIGESLRWLAEAMIRSEEGRMETMKEIERMRVEAEAKRGEMDLKRTEIIANTHNGNALTSSSNGVGGGAASSHTPHGFDLNLPALLTEFSYSKLSSRWTLRMCSGSCDIDIGMLVAPS*


CDS Sequence:
>Vu_14088.1
ATGGGAGTGAAACAGCAAGGGATGATGGAGGAGGAGAAAGAAGAAACAACCAACCACAACCTAGAACAAAACAAAAACCAAAACCTTAACCTAGACCACAACAACCATCCTTCTAACACTCTCCCAATCAAGGAAGAGAGTGGTTTTAGATCAAAGGGTTTTGGAAGTGGTGACAGAGTGAAGAGAGATGAATGGAGTGAAGGAGCAGTGTCAACCCTTCTTGAAGCCTATGAAGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAGGACGTGGCTCGACACGTGTCAGCACGTGCCAACTGCACCAAGTCACCCAAAACCTCCACACAGTGCAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAGTCGGCAACTGCAGAACATCCCTCCTCCTGGCCTCTCTATTCGCGCCTCGATCTTCTTCTCAGGGGAACTGGCCCTCTCCTCTCTTCGCCACCGCCACCGCCGCTCGCGGTGCCACCCTCGTCGGCAGAACCGCCGCAACAGTCGCCGCCGTCAGAGCCACTTGCAGTTGTGCAGAACTCGAATGGATCCAATGGGGTTGATGATAAGCTTGTCAAGGAAGATGTGTTAGGAGAAAAGTGTTGTGAAGAAGTATGTAGGAAGAATCCATTGGAGACAGATAGCAGCACTCCAGCAGTATACAGCAATAAGAAGGAAAAGAGGAAGAAGAAGGTGAATGATGAGAAGAGAAGAGGGAGAAGAAGGAAAGAGTATATGGAGATAGGAGAAAGCTTAAGATGGTTAGCAGAAGCCATGATAAGGTCAGAAGAAGGAAGAATGGAGACAATGAAGGAGATAGAGAGAATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGATCTCAAGAGAACTGAAATAATTGCCAACACACATAACGGCAATGCCCTCACTTCCTCCTCTAACGGCGTTGGCGGCGGTGCTGCCTCTTCCCACACACCCCATGGGTTCGACCTAAACCTTCCGGCGCTGCTCACGGAGTTCTCCTATTCCAAGTTGAGTTCACGGTGGACACTCAGAATGTGCTCGGGAAGTTGCGACATCGACATCGGAATGTTGGTGGCTCCTTCATAG


Promoter Sequence:
>Vu_14088::LG3:43167265-43169265(-)
TTCCACCTCATCAACTTTTTTTTTAAATTCAAAATTGACAATTCATTTTTCCTCAACATGCCATGCAAATGAAGAAGTGGACAACTCATTAAGTTTTGGCTAGCAAGACAGTTGCACAATTAACTTTTTAACGTCGTAAACAAAAATGATTAACTTGAACCGTTTTTAATAAATTAGGACATTTTTAAACTTTTTTTAAAAGATAGGTCAACTTTGAACATGTTAGAAGTGAACTTTAAGCCTAACTCAACCCCACAAAACCGGCTTGTAGGGTGAGGTTTGCACCCACTTACAAAGTATGAATTGGCCTTATCTCTAATAGATATGAGACTTCTAACACACCCCCTCACGCCGATGTATATACATCTCGAGCGTGGGATTAGACATTTTTAATGGGTGGTCCGATAGCGGCCCAATAGCGAGTGGAACAATATGTCCAACAAACAACAAATATCACTAGGATAGGCTCTAACTTGGCTCTGATACCATACGAAAAGGTTTAAAGAATAATTCTGATGATTATTTCAAAAAGTAGAGTACCATATATATACACAAGGATTCTATAATCCTTCATCTATTAAAGGAATAACAGGTGCACAAATATGCACAAATTATAATAATATCTAAATTATAACTAACACAATATTTGATTGTCTAATATCCGTTAATAGAATATTTGACATATCTTAACAAAAACGTCCTGAAGGGACAAAAGTAGTTATTAAGCCTAAATTAAAATACAATATTATTTTCATTTAAGGTGAAATCTCTAACATTCATTTCTTTTAGTTGTAAAAAAAAATTATTATATGATAAATTGCATCAAGTCTCTTTGAAATTGTGATAATTTATTATTTGTGAACAAATAATTCTAAATTAATTTTTACTATCCGTAAAACGTTATCCATGTAGAAATTATTAAGTCTCAATGATTTTGTATGAAAAAAACGTCATAAGCACAATACAATGTAAACAAAATTCCACAAAAGCAAGCAAATAATAAGATTTTCTTAAAAGAAAATTTAATTCACTTTTCAAACGTTTTTTTATCATGTTTAATTGATATATCAATAAATAAGTGATAAAATATTTTTGTAGTAAAAAGGAGTATATTTATATAAGTAAAAGAGTTATATAAGAATTGGGTGAACAGGATTGTAGAGAGAGAAAGGGTGACAGAGGCACGTGAATGACCCACCACCACCACTCTTCCTACCATCTCTCGTGTCTTTGGTTGGCTTCATGTCAACGCTAACAGCCAAACAACTCAACCCAAGCAATAAAAACCCTACATTTCCCACTAACTTCACCCACAAAGTAAGAAAACAAAAAAACCCCCCAAACAAAAAAAAAATAAAGGTTAACAAGTTAACATCATTAACTCTTTTGACAAAAGTGTATCCTTTTTCTCCCTTTGCCATTCTCCCACTAATCCTCATTTTTCCTCCCACTATCTTTCAACTCTCAATATTTGCAATTGCATCAACTATATTTATTTATATTTTTAATTTTTAAACTTTGAAGTAAAATTAAAAAAATTTCAATTGTAAATTTATAAACATTAAAAATAAATAAATATGATTTTCCTAATTCAAATATTATTACTTTTTTTTATGCATTGACCTAAAAAAATATTAATTTTAAGTCAAAATTTAGAATTAAAAACATTTAAATTTTTGTTCTATCCCATTCAAGATTTCAAATACCCATAAATCTAATTTCTTAAAACTCACAAACATGACTTCATTCCAACCCAACATTACATTCTTAATGAATTAGGATAATTTTCTTTAATACCATATTTTTGTACAATTTCTGATGATCATTCAAAACCAACCACTCTATAATTTATATGACTAATTTATAACCTTCCTATATGGTAACACTATATGTTGATCCTTAGATTCGAATGCTAGTGGTTTCCCTTACCCATTTGCAAATAGGGTGATGATGATGTTGTGGGATAAAAATAAAAATAAAAAGTTGTAGACTTTTAGTAG


Gene Sequence:
>Vu_14088(-)
ATGGGAGTGAAACAGCAAGGGATGATGGAGGAGGAGAAAGAAGAAACAACCAACCACAACCTAGAACAAAACAAAAACCAAAACCTTAACCTAGACCACAACAACCATCCTTCTAACACTCTCCCAATCAAGGAAGAGAGTGGTTTTAGATCAAAGGGTTTTGGAAGTGGTGACAGAGTGAAGAGAGATGAATGGAGTGAAGGAGCAGTGTCAACCCTTCTTGAAGCCTATGAAGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAGGACGTGGCTCGACACGTGTCAGCACGTGCCAACTGCACCAAGTCACCCAAAACCTCCACACAGTGCAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAGTCGGCAACTGCAGAACATCCCTCCTCCTGGCCTCTCTATTCGCGCCTCGATCTTCTTCTCAGGGGAACTGGCCCTCTCCTCTCTTCGCCACCGCCACCGCCGCTCGCGGTGCCACCCTCGTCGGCAGAACCGCCGCAACAGTCGCCGCCGTCAGAGCCACTTGCAGTTGTGCAGAACTCGAATGGATCCAATGGGGTTGATGATAAGCTTGTCAAGGTAAATTTTCAACGCAGTTTTCTTTTGTTTTATTTTAAGGGATTGAACATATTGAATAAGATTGTGATCATACGTAATAGAGAAAAAAAAAAAGAATTTCGTTGTTTAAAAATTAGCTTGTGGTTTTGTTTAATTTTATTTGGATAAATTTCTCATGAACCAAGACAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTGATGTTTTTCTTATAATTTCTTTAAATTCCTATGCTTTTAGTTTATTTTGATAAGAGATTATTTTTTAATTTTGCAGAAATATTTATGGAAGAGAAATTTTATTAAGAAATATTGATATTGACTGTAAAATTCTGATTCTAGATTCTCGATTGAGTTTTTTTATTATTTATCTAAGCTTTTATAATATATTGATGTTGATGTATAAAAAGATTTTTAATATATTTTAAACCATATTCATAAATGTATTTTAAAAACACGACGGAAAAACAACATAAAATATTTAGTGAAAATACCAAATATCTAATAGAAAATAGAAATTAATAAAACTCCTCATGCTATCAATTAATAGAAGTTATAAATAGTATACTTCTTGTTTGCGATTTTTCACGTAATTTGTGAAAAGATGTATTTCCTTTTGTGGGATTATGACTGATTTAATTAGATTGATGTTTTGGCATTAATGTGACTTGTTTATTAAATAAATTGATAACTTTATCATACACAATGATTTTTATCAAACAGTATAAAATGAACATTATTATGATAGATATATAATGATGTATAGATACAAATTGATGATTAACAGGAAGATGTGTTAGGAGAAAAGTGTTGTGAAGAAGTATGTAGGAAGAATCCATTGGAGACAGATAGCAGCACTCCAGCAGTATACAGCAATAAGAAGGAAAAGAGGAAGAAGAAGGTGAATGATGAGAAGAGAAGAGGGAGAAGAAGGAAAGAGTATATGGAGATAGGAGAAAGCTTAAGATGGTTAGCAGAAGCCATGATAAGGTCAGAAGAAGGAAGAATGGAGACAATGAAGGAGATAGAGAGAATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGATCTCAAGAGAACTGAAATAATTGCCAACACACAGTTAGAGATTGCTAGGATCTTTGCTACTGTCAACAACAAACCTCTTGATTCTTCTCTAAGAATTGGAAGGAATTAAGATCTTAAATAAATCATGTTTTTTCTTGTAACTGCACATAAACATAACGAATAATAATGTTATGAAATAGTTTAGAGGGAAAAAGTATTCTCAAATTGGTGGGGAATGTTTTTCCAGAATGCATATTGGGGGATTACGATTCCGAATGTCTCTCACACTATTATCAATTAACTGTATTATATTGAGTAAAATTTTTTTGAACTGTTTCCAATACAAATTTTAATTGAAAACTGTGATAGAATTAATGGATAATGATACATGTTCTTCTTCAACCTGCAATGGGTGGTGGAAACGTTGCCACTACGATGGTGGAAATCATTGCAGTAACGGCAATGCCCTCACTTCCTCCTCTAACGGCGTTGGCGGCGGTGCTGCCTCTTCCCACACACCCCATGGGTTCGACCTAAACCTTCCGGCGCTGCTCACGGAGTTCTCCTATTCCAAGTTGAGTTCACGGTGGACACTCAGAATGTGCTCGGGAAGTTGCGACATCGACATCGGAATGTTGGTGGCTCCTTCATAG