Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_14073	LG3	42947069	42948862	hypothetical protein	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
C/T	42948857	missense_variant	p.Arg597Cys

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_14073.1

MAALFVSLSLRAQILYVVLMFFTCIAAQSQQTNGTNFSCPSDSPPSCETYVTYITQSPNFLSVTSVSNIFDTSPLSIARARNIENEEDKLIPGQVLLIPVTCGCTGNRSFANISYEINPGDSFYFVATTSYQNLTNWHVVMDLNPTLSPNTLPVGIQVVIPLFCKCPPKNQLDRGIKYLITHVWQPNDNVSLVSNKFGASPEDILSENNYGQNFTAANNLPVLIPVTRLPDLIQSPSDGRKHRIGLPVIIGISLGCTLLVVVSAILLVYVYFLKMKSLNRSASSAETVDKLLSGVSCYVSKPTMYETGAILEATMNLSEQCKIGESVYKANIEGKVLAIKRFKEDVTEELKILQKVSHGNLVKLMGVSSDNDGNCFVVYEYAENRSLDDWLFAKSCSETSNSRTTLTWCQRISIAVDVAMGLQYMHEHAYPRIVHRDITSSNILLDSNFKAKIANFSMARTFTNPMMSKIDVFAFGVVLIELLTGKKAMTTKDKGEVVMLWKDIWKIFDQEENREERLRKWMDPKLDNYYPIDYALSLASLAVNCTADKSLSRPTIAEIVLSLSLLTQPSTSTLERSLTSSGLDIEATQIVTSIAAR*

CDS Sequence:
>Vu_14073.1

ATGGCTGCCTTGTTTGTTTCTCTTTCTCTCCGTGCCCAGATTCTTTATGTTGTACTCATGTTTTTCACTTGTATTGCAGCTCAATCACAACAGACCAATGGAACAAACTTTTCATGCCCTTCCGATTCACCTCCTTCGTGTGAAACCTATGTGACATACATAACCCAGTCTCCAAATTTTTTGAGTGTGACCAGCGTATCTAATATATTTGACACGAGTCCTTTGTCAATTGCAAGAGCTCGCAACATAGAGAATGAGGAAGACAAGTTGATTCCAGGCCAAGTCTTGCTGATACCAGTAACCTGTGGTTGCACTGGAAACCGCTCTTTCGCCAATATCTCCTATGAAATCAACCCAGGCGATAGCTTCTACTTTGTTGCAACCACTTCATACCAGAATCTCACAAATTGGCATGTAGTGATGGATTTAAACCCCACTCTAAGTCCAAATACTTTGCCAGTAGGCATCCAAGTTGTAATTCCTTTATTTTGCAAGTGTCCTCCAAAGAACCAGCTTGACAGAGGGATAAAGTACCTGATCACTCACGTGTGGCAGCCCAATGACAATGTTTCCCTCGTAAGCAACAAGTTTGGTGCATCACCAGAGGACATATTAAGTGAAAACAACTATGGTCAAAACTTCACTGCCGCAAACAACCTTCCGGTTTTGATCCCAGTTACACGCTTGCCAGATCTTATTCAATCTCCTTCAGATGGAAGAAAACACAGAATTGGTCTTCCAGTTATAATTGGTATCAGTCTGGGATGCACACTACTGGTTGTGGTTTCAGCAATATTACTGGTGTATGTATATTTTCTGAAAATGAAGAGTTTGAATAGGAGTGCCTCATCAGCTGAAACTGTAGATAAACTACTTTCTGGAGTTTCATGCTACGTAAGTAAGCCTACCATGTATGAAACTGGTGCAATCTTGGAAGCTACCATGAACCTCAGTGAGCAGTGCAAGATTGGCGAATCAGTGTACAAGGCTAACATAGAGGGTAAGGTTTTAGCAATAAAAAGATTCAAGGAAGATGTCACGGAGGAGCTGAAAATTCTGCAGAAGGTGAGTCATGGAAATCTGGTGAAACTAATGGGTGTCTCATCAGACAATGATGGAAATTGTTTTGTGGTTTATGAATATGCAGAAAATAGGTCTCTTGATGACTGGCTTTTCGCCAAGTCTTGTTCAGAGACATCAAACTCAAGGACCACGCTTACATGGTGCCAGAGGATAAGCATAGCAGTGGATGTTGCAATGGGTCTGCAGTACATGCATGAACATGCTTATCCAAGAATAGTCCACAGGGACATCACCAGCAGTAATATCCTTCTTGACTCTAACTTCAAGGCCAAGATAGCAAATTTTTCCATGGCCAGAACTTTTACCAACCCCATGATGTCAAAAATAGATGTATTTGCTTTTGGGGTGGTTCTGATAGAATTACTTACTGGCAAGAAAGCCATGACAACCAAAGATAAGGGTGAGGTGGTTATGCTGTGGAAGGACATTTGGAAGATCTTTGATCAAGAAGAGAATAGAGAGGAGAGGCTCAGAAAATGGATGGATCCTAAGTTAGATAATTATTATCCTATTGATTATGCTCTCAGCTTGGCCTCCTTAGCAGTGAATTGTACTGCAGACAAGTCTTTGTCCAGACCAACCATAGCAGAAATTGTACTTAGTCTCTCCCTTCTCACTCAACCATCTACCTCTACACTGGAGAGATCCTTGACTTCTTCTGGATTAGATATAGAAGCTACTCAAATTGTCACTTCCATCGCAGCTCGTTGA

Promoter Sequence:
>Vu_14073::LG3:42945069-42947069(+)

GAAACCGAACCCTGCTGTGGACGAACGCTAGGTCAATGACCAAGCACGAATCAGCACTAACGCTGGTTATAACCCAAGCGCTTTATAGGACGAGCGTTTCGGTATAGGACCGAACGCCAACTTTGGACGAACGTTCAGTATAAGGACGAACGCTCTCTAGAACTAACATTCGACATAAGGTCGAACAACAATAAGGACGAACGCTCGACATGAGGCCGAACGTCATTGAGGACGAACGCTCGACTTAAGACCGAACGTCACTTATTTATAAAGTTTTAAATATTGATCTATACTGAGCAGAACGAACGCTCATTCACTCAATTGGGGGACGCTCGTTCTCGAGCAGAATTCATTCCAAATGAATGAATTCCAATCTAAGTCATGTTAACCAAAAACCGAACGGTCTAAGACCGTACAGTGACGAACGTCCTTTTAGCAACAGAGAATGATCAGAAAATTTAGATTTTTCACACTTAGCAGAATTTTTCCAGATTTCCATTTTCCAACTTTATACTTCCATTTCAGGTTTAATTCCCTTCAAACATCATCATCATGCAGATTTCAACATTTAAAATCATTCCAACCACACAATAGCCATTCTCCATTCATCCATAATCAACTCAATATGCATTTAAAACAAATTCAACATCAAATATAATTCATACAAGCCGTATCAGTTCATGACAGATTCATCCAAACCAGAATGCATATCAGATATCAGTGATCATTTCTAACAACTCAACTTCATATTTTTCACACATGCAAAACAAACCAGAAATCATATTCCATATCAGTAAACGTTTCTAAATACTCAAACATCATGCTTTCCATATATGCATCTCAGATCATAAATCAAACAGTATAAATTAAACATATAAACTTCCCTTACCTTATCAAGCAGTTCACTTCAATTGTTTAGAGTTTCTCTCGTGCTCTCACAGCTTTCTATCAGAATTTCACTCAACCACTTCCACTTAATCTAACACACCAAAACCGTAAGCAGATCAGACTTCTAACTCATACATGCAACCAGAATTTTTGGTTTGCAGGAATTTAATGGACGAAGGTGCAAAATGTGGTATTTCATTATATTAATTAAATTAATTTTTAAATTTTAAAAAGAGGAAACATAAATAAAAATTATACATATATGGATTGGATTTTATAAGAGGTTATTATTTGAGCAAAATTTAGTAGACTGTAAATGGTAAATTATTATAAAAGGATCTTCATTAGAGATCCTTCAAGCTCTTTATGACTCATCGTAAATTTTGCATTATTAAACTACAAGAAATCAGTTTTGTTCCTTTGGTGTGAAATTGTTGGTTTCTATCCTTTTGCTTTATCCGATGTTGTTTTCAGTTCTTATAACTTCTTCCGAACTTTTCTTTCCTTAAACTTACTTTATAATTTCGTTTAATAATTCACATCTGATAGTATCATTTGATATTTCATCTGATAACAACATTTGATAAGCTTTTTAGTTATTTCGAAGTCTATTTTCAGCTAAATCTTACAGCCCCCTGTACATGCAATATTCCTTCTATTACTATGTTGAATCATGTGTAAATTACAGTCGCTAATAATGGTCTTGGTAAGTCTGAGCAAACCTACCCATATCGCAAGATATCAGCAAGTTTAGTTGGTGTATTGGTGTCGGCTTGCTGGCTAACATCGTGCATAGATAGAACTGGTAGGAACATTAACTGGCCGTCCAAAGCTTTGATTTGACATCAGAGTACCCTATTACCAATTTTTTATATATCATGCGCATGAAGTGCATACAATTTGTCTAATATAAATATTGACGTGTCCACTGTGTCTAGGATTCGGACAGCCAAAAGGAAATATGGTTAAAGCTAATGAAACAAACAGGACCATATATTTATATTAAACCAAATGATACTTTTATTGATAAAGAACTCTTCATATCAACAACGCCGATTGCCACTGATAGTAGACTGCCTCATAACTTACATTTGATCACAACTTCACATCAA

Gene Sequence:

>Vu_14073(+)