Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14034 LG3 42420618 42424163 PREDICTED: putative disease resistance RPP13-like protein 1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C 42420675 missense_variant p.Asp20His
A/G 42420719 synonymous_variant p.Lys34Lys
C/T 42420722 synonymous_variant p.His35His
A/G 42420878 missense_variant p.Ile87Met
C/T 42420925 missense_variant p.Ala103Val
C/A 42420932 missense_variant p.Asn105Lys
G/C 42420950 synonymous_variant p.Leu111Leu
G/T 42420987 stop_gained p.Glu124*
A/G 42420994 missense_variant p.Lys126Arg
G/A 42420998 missense_variant p.Met127Ile
A/C 42421019 synonymous_variant p.Leu134Leu
A/T 42421036 missense_variant p.Glu140Val
A/T,G 42421062 missense_variant p.Ser149Gly
C/G 42421066 missense_variant p.Ala150Gly
T/C 42421072 missense_variant p.Val152Ala
G/T 42421075 missense_variant&splice_region_variant p.Gly153Val
A/G 42421086 intron_variant
G/A 42421087 intron_variant
A/T 42421100 intron_variant
T/A 42421101 intron_variant
T/C 42421107 intron_variant
T/C 42421109 intron_variant
G/A 42421118 intron_variant
A/C 42421121 intron_variant
T/G,* 42421163 intron_variant
A/G 42421164 intron_variant
C/G 42421166 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14034.1
MASEMVIGVLVSTFVQRTIDTLAARLVHIFRQRKHKKQLGNLKMKLLAIDVVALDAEQKQFKDPLVRDWLLRAKDAVFDAEDLLDEIDYELSKSQAEAESQSATNKVWNSLNSSFVSFFEIEIESKMEQVIEDLEDLANESYILGLEKSAGVGKALEFGAPGSRLLVTTRSEKVVVTMRSEKHLLQVLRKDYCWDLFEKHAFQSANSQLDPDFMEIGKKIVEKCNGLPLALKTMGSLLYNKPSLREWESIMKSEMWDFSENESDILPALRLSYLHLPPHLKKCFAFCGLFPKGHRFDRDLLIQLWMAENFLESSSSPKEVGEQYFNDLLSRSFFQQSNEEEENAFIMHDLLLDLAKYLCQDSCIRLGVDEPQGVHKRTRHFSFATDQIRTFDGFGNFIDSRKLHTFVQTSWTGYPRVMLYWRCKISLDDLFSKFKYIRVLSLNVFRILTEVPKSIGNLKHLRSLDLSYTEIEELPDSIGLLYKLQILKLNHCKSLTELPSCLLQLDKLCFLELLNTEVKNVHILGELKNLQVLMNSFCVDIHEELSIQQLGQINLHGSLSISGLQSIEDPSHASEAYLKNKPHIVELEFNWNWSCSSSVDSSDSSSDDSTKDEDVIENLQPSKHLKKLSIRSYMGEHFPNWLFDNSLPNLVSLVLKECEYCKRLPPLGLLPSLKDLRIEKLHGIVSIDADFYGNNSSSFKSLEKLYFFDMKEWEKWECKVVTGAFPRLQKLSIKGCPKLKGQLPELLVPLEKLCIRYCQKLEAFAPRALDIKLEESAKVLLDWATVKSLLLAGDIMEASFLDMVRDNIPDNSIQHLKIYGSSFRPSPNIGLWTFPLHFFPTLKTLVLWRLKSLQMISQNHALECLDIGWCPKIESLPENKDMLKSLYISDCPRLEPFTEGGLPSNLKEMTLSNCPRLVGSLKGTFGDNPSLKTLHIEHLDAECFPDEGLLPLSLTELGIRNFPNLQELDYTVLNQLSSLKSLTLWNCPKLQRLPEEGLPKSISDLCIYLCLSLEDRIREGGEDWEKVAHIPRLRI*


CDS Sequence:
>Vu_14034.1
ATGGCATCAGAAATGGTTATCGGTGTTCTTGTTTCTACTTTCGTTCAGAGAACTATCGACACTTTGGCTGCCCGTCTTGTCCACATATTTCGTCAAAGAAAACACAAGAAGCAACTCGGCAACTTGAAGATGAAGCTCCTTGCCATTGATGTTGTGGCTCTTGATGCAGAACAAAAGCAGTTCAAAGATCCACTAGTCAGAGACTGGCTTCTCAGAGCCAAAGATGCTGTGTTTGATGCAGAGGATCTCTTGGATGAGATAGATTATGAACTCTCCAAAAGCCAGGCGGAAGCTGAGTCTCAGAGTGCTACTAACAAGGTGTGGAATTCCCTGAATTCTTCTTTTGTCAGTTTCTTTGAAATAGAAATTGAATCCAAGATGGAACAAGTCATTGAGGACCTAGAAGATCTTGCAAACGAAAGCTATATTCTAGGTTTGGAAAAGAGTGCTGGTGTTGGGAAAGCTCTTGAGTTTGGGGCCCCAGGAAGTAGGCTTCTTGTCACTACACGAAGCGAGAAAGTTGTTGTTACCATGCGATCAGAAAAGCATCTCCTGCAAGTACTAAGAAAAGATTATTGTTGGGACTTGTTCGAAAAACATGCATTCCAAAGTGCTAATTCTCAACTAGATCCAGATTTCATGGAGATTGGTAAGAAGATAGTTGAGAAATGTAATGGGCTTCCTTTAGCCTTGAAAACAATGGGAAGTCTATTATACAATAAGCCATCCCTTCGCGAATGGGAAAGCATTATGAAAAGTGAGATGTGGGATTTTTCAGAAAATGAAAGTGATATACTCCCTGCTTTAAGATTGAGTTATCTCCACCTTCCTCCTCATCTAAAGAAATGTTTTGCTTTTTGTGGCTTGTTTCCCAAAGGTCATAGGTTTGACAGGGACTTGTTAATTCAACTGTGGATGGCTGAAAATTTTCTGGAAAGCTCTTCGAGTCCTAAAGAAGTTGGTGAACAGTATTTCAACGACCTATTATCACGGTCTTTCTTTCAACAATCAAACGAGGAAGAGGAAAATGCTTTTATCATGCATGACCTTCTTCTTGATTTAGCAAAATACCTTTGTCAAGACAGTTGCATCAGGTTAGGAGTCGATGAACCACAAGGAGTACACAAAAGAACTCGTCATTTTTCATTTGCAACCGATCAAATTCGAACTTTTGATGGGTTTGGAAATTTCATTGACTCTCGAAAGTTGCATACATTTGTTCAAACAAGTTGGACCGGGTATCCTCGTGTTATGCTCTATTGGCGTTGCAAGATATCGTTAGATGACTTGTTTTCAAAATTCAAGTACATACGCGTCTTATCACTGAATGTCTTTCGTATCCTTACAGAGGTGCCTAAATCTATTGGAAATCTTAAGCATCTTCGTTCGTTAGATCTCTCTTATACTGAAATAGAAGAACTACCCGACTCTATAGGTTTACTCTACAAGTTGCAAATACTGAAGCTAAACCATTGTAAAAGTTTAACGGAGCTTCCCTCATGTTTGCTTCAACTCGACAAATTGTGTTTCCTAGAACTATTAAATACTGAAGTGAAGAATGTGCATATTTTGGGAGAGCTGAAGAATCTCCAAGTATTGATGAATTCGTTTTGTGTTGACATACATGAGGAACTCAGTATTCAACAATTGGGACAAATCAATCTTCACGGAAGTTTATCCATTAGTGGGCTGCAAAGTATTGAGGATCCCTCTCATGCATCAGAAGCATACCTGAAGAACAAACCACACATTGTGGAGTTAGAGTTCAATTGGAATTGGAGTTGCAGCTCCTCTGTTGATTCAAGTGACAGTTCCTCTGATGATTCAACAAAAGATGAGGATGTAATTGAGAATCTACAACCCTCAAAACACTTGAAGAAGTTGTCAATAAGGAGCTACATGGGTGAACATTTTCCAAATTGGTTATTTGATAATTCATTACCAAATCTGGTGTCCTTAGTGTTGAAGGAATGTGAATATTGCAAACGTTTACCTCCCCTTGGACTTTTGCCATCTCTTAAGGACTTGAGAATTGAAAAACTTCATGGGATAGTGAGCATTGATGCTGATTTTTATGGGAACAATTCTTCTTCCTTTAAATCCCTTGAGAAATTATATTTCTTCGATATGAAAGAATGGGAGAAATGGGAATGTAAAGTTGTGACAGGTGCTTTTCCACGTCTACAAAAGTTATCCATAAAGGGTTGTCCCAAGCTGAAAGGACAGCTGCCAGAGCTACTTGTTCCTTTGGAAAAACTATGCATTAGATACTGCCAAAAACTTGAGGCTTTCGCTCCCAGGGCTCTAGATATAAAACTGGAAGAAAGTGCAAAGGTGTTGCTTGATTGGGCTACAGTGAAAAGCCTCCTATTGGCTGGGGACATCATGGAAGCATCATTCTTGGATATGGTTCGGGATAACATACCCGACAATTCTATTCAACATTTGAAGATTTATGGATCCAGTTTTAGGCCTTCTCCAAATATTGGTCTGTGGACCTTTCCACTACATTTCTTCCCGACACTAAAGACGCTTGTTCTCTGGCGGTTAAAAAGTTTACAGATGATTTCTCAAAATCACGCACTGGAGTGTCTGGATATCGGTTGGTGCCCTAAAATTGAATCATTGCCTGAAAACAAGGATATGCTCAAGAGTTTATACATTAGTGATTGTCCAAGACTTGAGCCTTTCACTGAGGGAGGTTTGCCATCAAATCTAAAAGAGATGACACTCAGTAATTGCCCTAGACTTGTTGGCTCACTGAAAGGAACTTTCGGAGACAATCCGTCTTTGAAAACGTTACATATTGAACATCTGGATGCCGAATGTTTTCCTGACGAAGGTTTGCTTCCACTCTCTCTTACTGAACTAGGCATCCGTAATTTTCCAAATCTACAAGAACTGGACTACACGGTTCTCAATCAACTCTCATCTCTTAAAAGTCTAACCCTTTGGAACTGCCCCAAGCTTCAACGCTTACCAGAGGAGGGTCTTCCTAAATCAATTTCAGATCTTTGTATATATTTATGTTTATCGTTGGAAGACCGTATCAGGGAAGGAGGTGAAGACTGGGAAAAGGTTGCTCACATTCCGAGACTAAGGATCTAG


Promoter Sequence:
>Vu_14034::LG3:42418618-42420618(+)
TTGAAAAAAAGGATATGGAACGTTCAAAATCAAATGTTGTCAATTTCTGGCAGGACATACTGTCTCGGTTGGTCAAAGAACCGAGGCAGTAGACCAATTTCAAAAAAGCTGTCAGAGTTTTTCGCCTCGGTTGGTCAGAGAATGAGGCAGTAGGCCTATTTCGAAAAAGCTGTCAGAGTTTTCGCCTCGATTGGTCAGAGAACCGAGACAATAGGCCTATTTTGAAAAAGTTGTCAGGGTTTTTTGTCTTGGTTGGTCAGAGAACCGAGGCAGTAGCTTCTTTTAATAAAGTTGTAAGCCTAAAAGCTAGTTTTGCAGATAATTTTATGTGGTTTTAGGCATCGATTGTCTTTATAATCGAGGTTATAGAGGTTATAGACGTATAAGTTCGCTATAACTACAAAAATGCCACCGCGTTTTGATAGGCTTTGGTTTTGTGTAAACCGAAGCCTATTATACGAGTTTAAAAGCAAATTTTGTACTAGTGAAAGAAAAACCGAAAATCGATTTGGTATAAAGAGGTTTTTTTTCTCATCCCTAATGTCAACATATTTTCATTTGGAGACCATGGCACCAACCATCTTCATATTATTGGAAAAATAGTGTGAAATTATAGGTACTTTGGAGCACTTCACATGATGCCCACACTATAGTAGTTGACACAAATTCCGACATGTAAACAGATTTTGCTACTTTAAGAAGAGATATATAAGAAGAAAAAATAAAATAAATTAATTTTTACTATAAATATAATATAGTATTAGTATAAGTTAAAAATAAGAACTTAAAGATGTAATATAAAAAAAATTACAATTTAATTAATACATAAACTAAATTTAACTTGAAATTTTTTTTCTCTTTTTTTAAGAGTGCTTATAGTTGCAGTTATTGAAGGATGAACAACCATTGAAGAAACAATTGTTAAAATCATGCATTGGGAAAGTACTTAGAAATTAGTAATACATGAGTTTTGTAGTTCAGTTTGTGAATGACAGCTGTGGAACACAACACTTATTGTTGGTTGTTGACGACGAACCATCAAGGAAAAAACGATCACCAAAGAAAAACTAAAGGTCATAATTCAAAAAGTTAGCTTATAACTATTATTTCCATTGCACTGTAACGAATCAAAGACGTTCGCTTCACTTCAAAATACTCAGTTTCATTCATCCACTCACGGAAAATAAAATGAACTGTAAAATCATGGCTGTAGTGATGATTTATTTTTATTATTTTCTTCTAAAGTGCTTACAGATAGTTATGTCTAAATAAATTCCATAGCTTCAATTATTCGATAACATAAACTACTCAGGAAACAATTGTCAAAATTCGGCAGGCTTGGAAAAGTACTTTTTTTTTCTAGAAATTAACAATAAATGAAGTTAACATTTGCTGAATTATAGAATGTATTTAAGTAGTTTATGTTTGCTTGATGAAAAAAGTCACACAATGCATTCGTCTCATTTTTAATTTATTATTATTATTCTTACTGTTTCATATATAACTTTTTCTTCTTTCTTTCTTTTATTTTTTCAATCTGATCATCCCTTGTCTTTACATATATCATTGGCTTGTTATTTTTCATTTAATTTACAACTATTATCTCTATTATATCTTTTATAACTCACTTCTTAGCATTCTTTTTATTATTATATCAATATTCTCTGTATTATCAATATTCTCTTCTTTCTACCCGCGAAGACGTGGAGGATGGTACGTAATAATTGACAAGTGTAGGCAAATATAAGAAAATTTGAACATTGACTATATCATAACCACTCGTTCCTTCAAGCTAGTTGAGTACAGTTCATCAATAACAGAGAGCTGTCGGAAGACTCAAGTTGACGACGAACCATCAAGGAAAATATGTTCACCTCAAGGCCATCATTCAAAAAATAGCTTATCACTTTTATTTCCATTGCACTGTACCCAATCAAAGGCATAAGCTTCACTTGAAAATACTCACTTTCATTCATCCACTTCCTTTTCTGTTCTTACCA


Gene Sequence:
>Vu_14034(+)
ATGGCATCAGAAATGGTTATCGGTGTTCTTGTTTCTACTTTCGTTCAGAGAACTATCGACACTTTGGCTGCCCGTCTTGTCCACATATTTCGTCAAAGAAAACACAAGAAGCAACTCGGCAACTTGAAGATGAAGCTCCTTGCCATTGATGTTGTGGCTCTTGATGCAGAACAAAAGCAGTTCAAAGATCCACTAGTCAGAGACTGGCTTCTCAGAGCCAAAGATGCTGTGTTTGATGCAGAGGATCTCTTGGATGAGATAGATTATGAACTCTCCAAAAGCCAGGCGGAAGCTGAGTCTCAGAGTGCTACTAACAAGGTGTGGAATTCCCTGAATTCTTCTTTTGTCAGTTTCTTTGAAATAGAAATTGAATCCAAGATGGAACAAGTCATTGAGGACCTAGAAGATCTTGCAAACGAAAGCTATATTCTAGGTTTGGAAAAGAGTGCTGGTGTTGGGGTTGGATCAAGATCGGGTAGTAAATTAACATATACATCTTTGCCAAATGAAAGTGTTATCTATGGCAGAGATGATGACAAAGAATCTATCTTTAACTGGCTCACTTCTGAACTTACATCCGACACTGACATCAACCTATCTATACTTTCTATTGTGGGTATGGGTGGATTGGGTAAAACCTCACTTGCCCAACATGTATTCAATGACCCAAGGCTTGAAGGCAAATTTAATATCAAAGCTTGGGTAAGTGTCCCACAGGAATTTGATGTTCTCAATGTATCAAAAGCAATTCTTGAGGGTGTTTCAGCATCACCTGTTGATAGTACAAATCTTGAGGGAGTTCACAAAAAATTGAAAGAAAAATTGACGGGGAAGAAATTTCTTCTTGTTTTGGATGACAATTGGAACGAAAACAAATCCAAATGGGAACAAGTGCAGAAAGCTCTTGAGTTTGGGGCCCCAGGAAGTAGGCTTCTTGTCACTACACGAAGCGAGAAAGTTGTTGTTACCATGCGATCAGAAAAGCATCTCCTGCAAGTACTAAGAAAAGATTATTGTTGGGACTTGTTCGAAAAACATGCATTCCAAAGTGCTAATTCTCAACTAGATCCAGATTTCATGGAGATTGGTAAGAAGATAGTTGAGAAATGTAATGGGCTTCCTTTAGCCTTGAAAACAATGGGAAGTCTATTATACAATAAGCCATCCCTTCGCGAATGGGAAAGCATTATGAAAAGTGAGATGTGGGATTTTTCAGAAAATGAAAGTGATATACTCCCTGCTTTAAGATTGAGTTATCTCCACCTTCCTCCTCATCTAAAGAAATGTTTTGCTTTTTGTGGCTTGTTTCCCAAAGGTCATAGGTTTGACAGGGACTTGTTAATTCAACTGTGGATGGCTGAAAATTTTCTGGAAAGCTCTTCGAGTCCTAAAGAAGTTGGTGAACAGTATTTCAACGACCTATTATCACGGTCTTTCTTTCAACAATCAAACGAGGAAGAGGAAAATGCTTTTATCATGCATGACCTTCTTCTTGATTTAGCAAAATACCTTTGTCAAGACAGTTGCATCAGGTTAGGAGTCGATGAACCACAAGGAGTACACAAAAGAACTCGTCATTTTTCATTTGCAACCGATCAAATTCGAACTTTTGATGGGTTTGGAAATTTCATTGACTCTCGAAAGTTGCATACATTTGTTCAAACAAGTTGGACCGGGTATCCTCGTGTTATGCTCTATTGGCGTTGCAAGATATCGTTAGATGACTTGTTTTCAAAATTCAAGTACATACGCGTCTTATCACTGAATGTCTTTCGTATCCTTACAGAGGTGCCTAAATCTATTGGAAATCTTAAGCATCTTCGTTCGTTAGATCTCTCTTATACTGAAATAGAAGAACTACCCGACTCTATAGGTTTACTCTACAAGTTGCAAATACTGAAGCTAAACCATTGTAAAAGTTTAACGGAGCTTCCCTCATGTTTGCTTCAACTCGACAAATTGTGTTTCCTAGAACTATTAAATACTGAAGTGAAGAATGTGCATATTTTGGGAGAGCTGAAGAATCTCCAAGTATTGATGAATTCGTTTTGTGTTGACATACATGAGGAACTCAGTATTCAACAATTGGGACAAATCAATCTTCACGGAAGTTTATCCATTAGTGGGCTGCAAAGTATTGAGGATCCCTCTCATGCATCAGAAGCATACCTGAAGAACAAACCACACATTGTGGAGTTAGAGTTCAATTGGAATTGGAGTTGCAGCTCCTCTGTTGATTCAAGTGACAGTTCCTCTGATGATTCAACAAAAGATGAGGATGTAATTGAGAATCTACAACCCTCAAAACACTTGAAGAAGTTGTCAATAAGGAGCTACATGGGTGAACATTTTCCAAATTGGTTATTTGATAATTCATTACCAAATCTGGTGTCCTTAGTGTTGAAGGAATGTGAATATTGCAAACGTTTACCTCCCCTTGGACTTTTGCCATCTCTTAAGGACTTGAGAATTGAAAAACTTCATGGGATAGTGAGCATTGATGCTGATTTTTATGGGAACAATTCTTCTTCCTTTAAATCCCTTGAGAAATTATATTTCTTCGATATGAAAGAATGGGAGAAATGGGAATGTAAAGTTGTGACAGGTGCTTTTCCACGTCTACAAAAGTTATCCATAAAGGGTTGTCCCAAGCTGAAAGGACAGCTGCCAGAGCTACTTGTTCCTTTGGAAAAACTATGCATTAGATACTGCCAAAAACTTGAGGCTTTCGCTCCCAGGGCTCTAGATATAAAACTGGAAGAAAGTGCAAAGGTGTTGCTTGATTGGGCTACAGTGAAAAGCCTCCTATTGGCTGGGGACATCATGGAAGCATCATTCTTGGATATGGTTCGGGATAACATACCCGACAATTCTATTCAACATTTGAAGATTTATGGATCCAGTTTTAGGCCTTCTCCAAATATTGGTCTGTGGACCTTTCCACTACATTTCTTCCCGACACTAAAGACGCTTGTTCTCTGGCGGTTAAAAAGTTTACAGATGATTTCTCAAAATCACGCACTGGAGTGTCTGGATATCGGTTGGTGCCCTAAAATTGAATCATTGCCTGAAAACAAGGATATGCTCAAGAGTTTATACATTAGTGATTGTCCAAGACTTGAGCCTTTCACTGAGGGAGGTTTGCCATCAAATCTAAAAGAGATGACACTCAGTAATTGCCCTAGACTTGTTGGCTCACTGAAAGGAACTTTCGGAGACAATCCGTCTTTGAAAACGTTACATATTGAACATCTGGATGCCGAATGTTTTCCTGACGAAGGTTTGCTTCCACTCTCTCTTACTGAACTAGGCATCCGTAATTTTCCAAATCTACAAGAACTGGACTACACGGTTCTCAATCAACTCTCATCTCTTAAAAGTCTAACCCTTTGGAACTGCCCCAAGCTTCAACGCTTACCAGAGGAGGGTCTTCCTAAATCAATTTCAGATCTTTGTATATATTTATGTTTATCGTTGGAAGACCGTATCAGGGAAGGAGGTGAAGACTGGGAAAAGGTTGCTCACATTCCGAGACTAAGGATCTAG