Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14021 LG3 42304426 42309413 PREDICTED: dr1-associated corepressor-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03021 Transcription machinery [BR:ko03021]
SNP Position Effect Amino acid change
G/A 42304785 5_prime_UTR_variant
T/A 42304882 5_prime_UTR_variant
A/G 42304887 5_prime_UTR_variant
T/C 42304935 5_prime_UTR_variant
A/T 42305094 5_prime_UTR_premature_start_codon_gain_variant
C/T 42305125 5_prime_UTR_variant
C/A 42305197 5_prime_UTR_premature_start_codon_gain_variant
T/A 42305353 5_prime_UTR_variant
G/A 42305428 5_prime_UTR_variant
C/A 42305440 5_prime_UTR_variant
A/T 42305465 5_prime_UTR_variant
G/C 42305483 5_prime_UTR_variant
A/G 42305541 5_prime_UTR_variant
A/T 42305697 5_prime_UTR_variant
A/C 42305737 5_prime_UTR_variant
C/G 42305741 5_prime_UTR_variant
C/T 42305748 5_prime_UTR_variant
T/A 42305760 5_prime_UTR_variant
G/A 42305829 5_prime_UTR_variant
C/T 42305907 5_prime_UTR_variant
T/C 42306047 5_prime_UTR_premature_start_codon_gain_variant
G/T 42306088 missense_variant p.Lys16Asn
G/A 42306380 upstream_gene_variant
G/T 42306437 upstream_gene_variant
T/A 42306539 upstream_gene_variant
T/C 42306623 upstream_gene_variant
G/A 42306769 upstream_gene_variant
G/A 42306779 upstream_gene_variant
C/A 42306845 upstream_gene_variant
G/T 42306877 upstream_gene_variant
A/G 42306929 upstream_gene_variant
A/G 42306993 upstream_gene_variant
T/A 42307018 upstream_gene_variant
G/A 42307021 upstream_gene_variant
A/T 42307216 downstream_gene_variant
A/T 42307217 downstream_gene_variant
A/T 42307260 downstream_gene_variant
T/C 42307283 downstream_gene_variant
C/A 42307342 downstream_gene_variant
T/A 42307352 downstream_gene_variant
A/T 42307362 downstream_gene_variant
C/A 42307377 downstream_gene_variant
G/A 42307381 downstream_gene_variant
T/A 42307390 downstream_gene_variant
G/A 42307718 downstream_gene_variant
T/G 42307732 downstream_gene_variant
G/C 42307760 downstream_gene_variant
T/C 42307898 downstream_gene_variant
C/T 42307982 downstream_gene_variant
C/T 42308021 downstream_gene_variant
C/T 42308063 downstream_gene_variant
C/A 42308107 downstream_gene_variant
G/A 42308137 downstream_gene_variant
G/T 42308311 downstream_gene_variant
G/A 42308335 downstream_gene_variant
T/A 42308358 downstream_gene_variant
A/T 42308444 downstream_gene_variant
C/A 42308456 downstream_gene_variant
G/T 42308461 downstream_gene_variant
A/T 42308462 downstream_gene_variant
A/T 42308636 stop_gained p.Arg159*
T/A 42308678 missense_variant p.Ser173Thr
T/A 42308707 synonymous_variant p.Ala182Ala
T/A 42308714 missense_variant p.Cys185Ser
A/G 42308789 missense_variant p.Thr210Ala
T/A 42308869 synonymous_variant p.Pro236Pro
A/G 42308971 synonymous_variant p.Leu270Leu
A/G 42309075 3_prime_UTR_variant
G/A 42309160 3_prime_UTR_variant
C/T 42309202 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14021.1
MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHAEAGADDRAISKRRKAVGDDCNDSDEEVKRSKMQELSHTGSTGRGRGRGRGRGRGRGRPPLVRDTYHQDAESEPCPSVQPSNQQSANPCVAVDSGSESKDIPKEENVAAPVVSTDSLRNIDLNAITNENDDKKASVAEPPSTEGKHEEILGWPLSDVDKMAIDSTQLAQLSRPLEEEEEDYDEEEG*

>Vu_14021.2
MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHAEAGADDRAISKRRKAVGDDCNDSDEEVKRSKMQELSHTGSTGRGRGRGRGRGRGRGRPPLVRDTYHQDAESEPCPSVQPSNQQSANPCVAVDSGSESKDIPKEENVAAPVVSTDSLRNIDLNAITNENDDKKASVAEPPSTEGKHEEILGWPLSDVDKMAIDSTQLAQLSRPLEEEEEDYDEEEG*


CDS Sequence:
>Vu_14021.1
ATGAGGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCTGTTCCTGTTTTAGTTTCTAAAGCTCTAGAACTATTTTTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCGTTGCATTTGAAACATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTTAGCAGAGTTCCTGATTACGGTCATGGTCATGGCCATGCTGAGGCTGGTGCTGATGATCGGGCCATTTCAAAAAGAAGGAAAGCTGTTGGTGATGATTGTAATGACAGTGATGAAGAGGTTAAGAGAAGCAAGATGCAAGAGTTGAGCCACACTGGCAGTACTGGTAGGGGAAGAGGCCGGGGTAGAGGTAGAGGCCGTGGCCGAGGGCGACCACCTTTAGTAAGAGACACATATCATCAGGATGCTGAATCTGAGCCATGCCCCTCTGTTCAGCCGAGCAACCAACAAAGTGCTAACCCATGTGTTGCAGTGGACAGTGGTTCTGAGTCAAAAGATATACCAAAGGAGGAGAATGTTGCAGCTCCTGTTGTAAGCACTGATTCACTCCGAAACATTGACCTGAATGCCATTACGAATGAAAATGATGACAAAAAAGCTAGCGTGGCAGAACCTCCTTCAACAGAGGGCAAGCATGAAGAGATTCTGGGGTGGCCCCTTTCTGATGTGGACAAGATGGCCATTGATTCGACACAGCTTGCGCAGCTGAGTAGGCCATTAGAAGAGGAGGAGGAAGATTATGACGAGGAGGAGGGGTAA

>Vu_14021.2
ATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCTGTTCCTGTTTTAGTTTCTAAAGCTCTAGAACTATTTTTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCGTTGCATTTGAAACATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTTAGCAGAGTTCCTGATTACGGTCATGGTCATGGCCATGCTGAGGCTGGTGCTGATGATCGGGCCATTTCAAAAAGAAGGAAAGCTGTTGGTGATGATTGTAATGACAGTGATGAAGAGGTTAAGAGAAGCAAGATGCAAGAGTTGAGCCACACTGGCAGTACTGGTAGGGGAAGAGGCCGGGGTAGAGGTAGAGGCCGTGGCCGAGGGCGACCACCTTTAGTAAGAGACACATATCATCAGGATGCTGAATCTGAGCCATGCCCCTCTGTTCAGCCGAGCAACCAACAAAGTGCTAACCCATGTGTTGCAGTGGACAGTGGTTCTGAGTCAAAAGATATACCAAAGGAGGAGAATGTTGCAGCTCCTGTTGTAAGCACTGATTCACTCCGAAACATTGACCTGAATGCCATTACGAATGAAAATGATGACAAAAAAGCTAGCGTGGCAGAACCTCCTTCAACAGAGGGCAAGCATGAAGAGATTCTGGGGTGGCCCCTTTCTGATGTGGACAAGATGGCCATTGATTCGACACAGCTTGCGCAGCTGAGTAGGCCATTAGAAGAGGAGGAGGAAGATTATGACGAGGAGGAGGGGTAA


Promoter Sequence:
>Vu_14021::LG3:42302426-42304426(+)
AGCCGCCAGGTTTGCAACTTGACCAAACAGTCTCACCTATATGCTTAATATTATTTCTTACAGTGCAGATAAACATATCTTGTACATAAAAGCGGACACTTGAAAGCCGATCATCCTGAAGTACTTCTAAACCCAGCAGATGTTCGCCCAAGAACACCCACGTGCATAAAGGGATACACTCCCGCTGGCCGATGTTCGCCCTAGAACACCCAGGTGCATCGAACAACACATGCATAAAGGGATACACTCCCGCTGGCCGATGTTCGCCCTAGAACACCCAGGTGCATCGAACAACACGTGCATAAAGGGATACACTCCCGCTGGCCGATGTTCGCCCTAGAACACCCAGGTGCATCGAACAAAGGGACACACTCCCGTTGGTAGATGTTCGCCCCAGAACACCCAGAACATCAACCGCTCGACAATCCATGGACGAGCGTTCAAGCAGTCGGCCGTTCGGCCTCAAAGGTGTTCGCCCTTTGGTTTCAACCGCTCGACAATCCATGTACGAGCGTTCAAGCAGTCGGCCGTTCGGCCTCCCTTTGGTTTCAACCGCTCGACAATCCATGTACGAGCGTTCAAGCAGTCGGCCGTTCGGCCTCCCTTTGGTTTCAACCGCTCGCCAACTCATGTGTATGAGCGTCCATTCAGTCAGTCGTACAGCGTCAACGCTCGACATCAACGCTCTACAATCAAATGTCAACGAGCGTCCACTCAGTCAGCGTTCGACCTCAACGCTCGACAATCAAATGTCAACGAGCGTCCACTCAGTCAGCGTTCGACCTCAACGCTCGACAATCAAATGTCAACGATCGTCCACTCAGTCAATCGGTCGACCTCAACGCTCGACAATCAAATGCACGTCAACGAGCGTCCAAACATCGCTCGACATTCCGTTTCAACGAGCGTTCCATAAGCGCTCGCCAATCCGTATCAGCGAGCGTTCAAACATCGCTCGACATTCATGATTAACGAGCACTCAAGAAGTTGGCCGTTCGGCCTCAAATTTGTTCAACCTTTTGGTTTTTGCCGTTCGTCTTCGCCTCCTTTTTGTCCATCAAATTCCTTACTTGCACACGCTCTCTAATTACAGCGAAGACAGCCTCCATCAAACTCATAAGTCCTAGAGTTACCACGTTCATAAAACGGAACGGTTAACTCGGACTTGGGGGGCATGTTATGTAGTAAGGATATTTATGTAATAACATAAATATCTTAGATATTTCAGACAGTTAAAATATCAGTCAAAGCCACTAACCACACTTTTAGGTAAGGTGGTTATTATTATTTTGCTTATAAATACAGTGACAGGACCCAAGTCCAGGTACGTTCTCTTTATGCTCTAGAGATCCTGAATAATATTTCAGAGCAGTATCCAATTACTCTCTTGAGAGCTTCAGCTCCATAACTCACATCTGACTTGAGCGTCGGAGTATCTTTGCAGGTACCTCCCCCTCCTTTGGTGAATACGAAGGACAACAGTTGAAGAAATGCAAGCATCCCAGACATCCAGGAGCAACAGAGACACACAGGAAAATGTACACCGAAACAAGTTGTAAATACTAAAATATTTGTAATAGCTAAAACTATTTTAAGCTTTTTAATTAAAATAAATAAAAAACTTATGGAATTTGAAATTTAATTTTAACTACAATTTTATAAAAGTGATCTTTGTAAAAAAGTTTTATATAGATATGCATAGACATAGAGAGTGCTACTACTTATGAAGTAAATTTAGTTCAATTGGTGAGTGTTACTTTATTTGTCCAATGTGGTTCGTTTTCTTTTCTTTCTTTCTTTTGTACTTTAAATATAAGCAAAGAAAATATCCCAACAATTATCTCTCAACACGTCACCGTTTTGACTCCTTCCTTTTAACACACTCTCACCTTCTTCTGCCTACATGCTTTACATCTATTGGGCGGTGACACGATTCCTGTCACTGGCATGTAACTGTAACAAAACCCTTGCTGAGGCATATCTCGTTGAATGAATCCTTG


Gene Sequence:
>Vu_14021(+)
GAGAGAGAGTGGCCTTTGGATCTGAAATGGGTTTCTTCGATTTCATCGTGTTGATGTTGGGGTCACTCTTTTTGTTCAAAGCTTTCGATTTTGCTTTTTTGATCTCTCTCTTCTGCTCCATTTGATTCCCCCAATTCTTCAGTGTTCAAACCCTAATCTGTTGCCATGAGGAAGAAGCTCGATACCCGTTTCCCTGCTGTAAGTGTTCTCCATTTTCTCTTTGTAAAGATTGTATTTTGTCTTAGGTTTCTGTTATTTGGATGCAAGGAAAAGTGTGTGGAAGTGACAGCAATTGAGCTAATCTCGACTGTGCTTTTGTTTGTCTTTTTTGTTTTTTTTTCTTGAGAAAAAAAGGTTCTGGTTTATGGTAAATGTTTATACTTTGTTACGATTTATGGGTTTCATGTGTTTGGGTTTATGGACTTAATAATTAAAGTGGGTGATTTTATGTTGATGTGGGTATTCTGGAGACTTGTGTTACTTTTAGGTTATTGACATAGCTTAGGTTTTTTAAAAATAAAAAAACTTTTTGGGTTTGTTTGGGAACTGTGGTTTAAGGATACTTGATTGACGTGTCACTGAAGACTGCTGAAGAGGATACTGATGGGTTTATGTTTTTTGTGTTTCTGATGATTTTGGTTCTCCCACAGTCCTCATTTGTTGTGGACATGGGATAGAACCGGCCTTTTTTAAATTCAACAATTCAGTATCCCATTGTGAAATTACATCTTCTCTGAAATTTGAAATCAGTTTTGCAAGTTAACCTGATTTCTGTTTAAAACGTGTGTCTACTTCACATTTTTAATATTTTAAAGCCTGAATAAATTTCTTACATCGCTTGTAAATGTTAATTATTCTTCAGAATATGGTGGGCTAACTAGTTGCGAGCTGAGTTAACATCAGTCTTTAATGTACGGTGTCAGGGATTTATAATAGAATACAGTTATTCCTTTAAGGATTGATTATGATGACATCAATTAGGAAGACTATTTGATGTTAGTGGCATTTTCGAATCTATGGTAATTTTTAGCCAGGTGTTACTGTTAGGCATAGCTTTGCTAAATCGGGTGGGATATACAAGTAAGGAGTAAAGAAGGAATTTGGGTTGCAAGGAGAGTAGGAAGGAAAAGAAAACAATTATAAGCAACGAAAAAGGGAGGGAAGCCATTGAGGGAGTGTTTTAGGCCTTTTAGGAACTGGTGGAAGAGATGCAGACACTTGAAGATTTGTAGTGTTCCATATTTTGTTTCTTGTTTTGTGAGGCACTCTGGACTTTGTAATTGGAGTTTATACCTATTTCTCTCTGATAAAATACCTTGTTTCTATCACTTTTATCCCATTATATCTTTCTAGCATATAGAAGTCTTCATGTACAATTAACAAAGACCTTACAGTAACTACCAGTAATTAGAGAATTGGGAGACATGATATTGTTTTTACCTTATTTATAGAAGGGTAAAACTTTAGGGAGACAGGGCAAGCCACTGCTTCTATAAACTTCAAATCAAGTTATAAGTTGTAACTAACACAAGGACTAATTTGTAATTTGGCCTCTGTTAAATTCTTCTACTTGTCTTTAAAGTATCATGAGGAGTGAGCTCTTGGAAAAGAACAATTTATTTTGAGTGATGAAACCTTCAAATTGCAGGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCTGTTCCTGTTTTAGTTTGTAAGTTGCTGTGGTTTACTGTATTGTTAACTTCAGACCGCTTCTTGCTTGTTTCTCTTATATATGTTGTTGACACTGCTCTTAAATGGATTTCAGCTAAAGCTCTAGAACTATTTTTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCGTTGCATTTGTAAGTCTGTTTCTTTTGCTTCAATCTTCCATTTTAGTGATTGGGAACTAACTCTTTAGTTACAATAATGCCTTTATAGAAGATTTCTTTTATATTTTTAGATTTAATTTCAATTTCCAATTCCCTTTTTCATATATCCAAGTTAAAAATGGAAGCTAAATGTGAGACAGGAAAGTAGTCAGTTTTTAAGCTATAAAAATTCTTAATCATTTAATCTAAGTATGAATGTTAAAATTTTATTAGAAGCATTTATGTCTAAACTTAAAAGTTAATGTGCTTGTTGGGGTATGCATCCATGATGTGTAAAATAGATTGTTAAAGTTTATTGGTATATCTTATTTGTACTGTCACTTCAGCATATTTTTTGTATTGGCGTGTTTATGAACTTGTAACATGTTTTGTATATCTTAACTTGAATCTGAAGGAAATTATGATAGGACTGGAAAGAAAAATAAAGGGCACCAGGTTTCAACACTGAAAACTGCTTACTACATTGTCATAAGCTTGCCGATGCTCAAAATGTTTTAAGTATGGATTAACGCTTAAAAAAGTTTTCTAAAAGCAAAAAGGGGAAGGGTTGAGTTCCACCATGAGCACCACAGCTTGGCAGTGGCTAAGGGATGACAACAATTTTCTATCTTCCAAAAGTCTCATTCACTTGGACTCCAAGTTGTTAAAAACTAAGATCAAATTAAATCTATTTTTGTTTTCTGAAACTACATTGGTAGCTGTGGCTTTTCCCTGTACTGACAATTGCATAAAATAACTGTTAATTCCACGTATGATTCACCTTTTTCTCACCATTTTATTAGCCACGGTCTCATATTTTATTCTTTGTTTGTCTTGCCATTTGTTTCACTCCAAAGTCTATCATAAATAAATTTTTTTACGAGTTAAACAATTTATCTGGTTGCCTTGTAAATAGGATACTTGTGATTTCAAATATTAGTGGCTCTTGGCAATGTTCAAATTCTGAATTGTGTGCTATATTTTGGAGGGTATTCCCCTTGTCGATTCTAAAATTTAAGGAATTGATGGCACCGAGGAACTGCGTTAACAATCCCTAGCATTTCTTGTGTTCTCAGACATCTTTTAATTAATTTTACTATGATATCCAGATTCCGTTTGGTTATGATATTATATTGTTTCTCTTATCTGCCTTCCAAACTCCATTTATAATAAGGACTATGAACTATGAAATCAAGTCTAACAAATTGTGACTGTAAATTGCAGGAAACATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTTAGCAGAGTTCCTGATTACGGTCATGGTCATGGCCATGCTGAGGCTGGTGCTGATGATCGGGCCATTTCAAAAAGAAGGTTTGAATCCAATATCTTTGTTTTGTTTTGTTGTTTTACCCTTCTGATATGCATATTGTTAGTTATGTACAACAATGCTGTCTACTTTTCCAGGAAAGCTGTTGGTGATGATTGTAATGACAGTGATGAAGAGGTTAAGAGAAGCAAGATGGTAATTTAATTTTTTTATGTATTTGCACAAAAACCCTTAATAACATACTACTCAATCATCATTAATGCTTGTGGCAACCCTCTTGTTCCCTTTTGTTTACATAATTTTTTGTTTTAATTTCTCATTTAGTGCCAATCACGCATTCATGATTAAGCCTTTTCCACAAAATGCCTCATATCTTATCAGTAACATAGAATCCAAATTGTGTTTAACCTTATAGAAAAATGAAGTCCCCTAAACGATTGTATAAAAATATACTCCACAAGGTTTTGATATTATCATTTTCAGTTTTAGTTCCACAAAAAACCAGTACTTACACATCTGCATGTCTACGACTTTCTTTAAAATGTTACCATATCTGGCACCCTATAAAAGGGCTATTTGGTTTGAGAAGTTTTCTATTTTCATTTGTAATTACAAAAAGGTCACCTTGTTTACATTTTATTTGCTATTTTTAAAACGTTGAACTGGAAATAGTGGTAATTGCTATTTATTGTTTTATGTTTTCTTTAATTCTAAGTTGAAATACTAAATGACAAAAAAAAATATTTTCTCAAACCAATGCTTTTACTAGCATAGTTTGTCATCTGTAGAACACAAAAAAATCATGAGAGTCTTGCAAATGATGTTGGTATATATACCTAGCAGACCCTTGATGTACATCATGTTTTGCTCAATAATGTTTTTCTTCTATTCCAGCAAGAGTTGAGCCACACTGGCAGTACTGGTAGGGGAAGAGGCCGGGGTAGAGGTAGAGGCCGTGGCCGAGGGCGACCACCTTTAGTAAGAGACACATATCATCAGGATGCTGAATCTGAGCCATGCCCCTCTGTTCAGCCGAGCAACCAACAAAGTGCTAACCCATGTGTTGCAGTGGACAGTGGTTCTGAGTCAAAAGATATACCAAAGGAGGAGAATGTTGCAGCTCCTGTTGTAAGCACTGATTCACTCCGAAACATTGACCTGAATGCCATTACGAATGAAAATGATGACAAAAAAGCTAGCGTGGCAGAACCTCCTTCAACAGAGGGCAAGCATGAAGAGATTCTGGGGTGGCCCCTTTCTGATGTGGACAAGATGGCCATTGATTCGACACAGCTTGCGCAGCTGAGTAGGCCATTAGAAGAGGAGGAGGAAGATTATGACGAGGAGGAGGGGTAAATATTATAGTCTTTGGGTGATTAGATTAGTGAAAAAGCTCATGATAACTGTAGAATAAGTACATACTAGTGTTATGATTATGAGTACCCACTAGCTGTCAAAACATGTCCCATGTTGTTGGCGGCAGGCTGAAAAAAGGGTCTGAATGTGCCTTTAGATCCCCTTTTTATTAATCTGGTTTGTATGTGTAGCTGATGATGTATCGTTCAATTGACCAGTAATGTTAGCTTTGTACTCTTAGGTCTACAATGTATGTATATCACAATTCTAGATGGAGTGAAATTTATGCATGCAACCTTATTTAATATTGCTGCAGAAACTTTGACTATTTGCCAGTCTCTCAGCTAATGTCTATCCCTTTTTGGCAAAGATGGATTGGCATATCTATACAAGCAGGGTTGGC