Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14007 LG3 41875877 41878555 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 41875901 synonymous_variant p.Thr484Thr
T/A 41875940 synonymous_variant p.Thr471Thr
C/T 41876002 missense_variant p.Val451Ile
G/A 41876003 synonymous_variant p.Val450Val
A/G 41876004 missense_variant p.Val450Ala
C/T 41876006 synonymous_variant p.Val449Val
C/T 41876018 synonymous_variant p.Ala445Ala
C/T 41876021 synonymous_variant p.Leu444Leu
C/G 41876024 missense_variant p.Met443Ile
A/C 41876025 missense_variant p.Met443Arg
T/C 41876030 synonymous_variant p.Val441Val
G/C 41876039 synonymous_variant p.Ser438Ser
T/C 41876042 missense_variant p.Ile437Met
C/T 41876115 missense_variant p.Arg413Gln
A/G 41876202 intron_variant
G/A 41876244 intron_variant
A/G 41876265 intron_variant
C/T 41876316 missense_variant p.Gly378Asp
A/T 41876319 missense_variant p.Val377Glu
C/T 41876321 synonymous_variant p.Thr376Thr
T/A 41876397 missense_variant p.Glu351Val
A/G 41876445 intron_variant
G/T 41876464 intron_variant
A/C 41876483 intron_variant
C/T 41876516 intron_variant
G/A 41876778 stop_gained p.Arg270*
A/T 41876850 intron_variant
C/G 41876870 intron_variant
A/G 41876924 intron_variant
A/G 41876952 intron_variant
A/G 41877045 intron_variant
C/T 41877054 intron_variant
T/C 41877057 intron_variant
T/G 41877135 intron_variant
C/A 41877171 intron_variant
C/G 41877172 intron_variant
C/T 41877190 intron_variant
A/C 41877221 intron_variant
G/T 41877233 intron_variant
T/C 41877256 intron_variant
T/C 41877266 intron_variant
C/T 41877302 intron_variant
T/C 41877324 intron_variant
G/A 41877429 intron_variant
C/T 41877442 intron_variant
C/T 41877500 intron_variant
A/T 41877600 intron_variant
A/G 41877643 intron_variant
A/G 41877661 intron_variant
A/G 41877663 intron_variant
G/T 41877667 intron_variant
T/A 41877691 intron_variant
A/T 41877705 intron_variant
C/T 41877708 intron_variant
T/C 41877880 missense_variant p.Lys226Glu
A/T 41877971 synonymous_variant p.Gly195Gly
A/G 41877989 synonymous_variant p.Ala189Ala
T/A 41877994 missense_variant p.Ser188Cys
A/G 41877998 synonymous_variant p.Asn186Asn
G/C,T 41878046 missense_variant p.Ser170Arg
C/T 41878047 missense_variant p.Ser170Asn
A/G 41878055 synonymous_variant p.Ser167Ser
A/G 41878126 missense_variant p.Trp144Arg
C/A 41878224 missense_variant p.Arg111Leu
C/T 41878279 missense_variant p.Ala93Thr
T/C 41878284 missense_variant p.Asp91Gly
G/A 41878352 synonymous_variant p.Ser68Ser
A/G 41878421 synonymous_variant p.Thr45Thr
C/T 41878475 synonymous_variant p.Lys27Lys
A/C 41878509 missense_variant p.Leu16Trp
A/C 41878521 missense_variant p.Phe12Cys
C/G 41878534 missense_variant p.Val8Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14007.1
MIGTQGKVRSIFFSFLLLLSFRSFSTKAKAQSSLGSNCENTTQQTLSSAYQTNLDRILTWMSSDAATSNGYNHNTIGTNSSVYGLYDCGGDVAGYFCQFCIATAVKEAPQRCSNRLSAVVWNDYCVIRYSNEDFFGKAITYPIWHTPGTKNISNTAEIQRGEDFWRSMISKATNETNQLYYKDGFNLSATESRYGVVQCTRDLTNEGCRQCLEDILAEVPKCCEQKIAYMVWTGSCLMKYDDYMFYLLANQTPSAPAPNPQTDVEKRKQFDWKLRLSIIHGIARGILYLHEDSQLRLIHRDLKASNVLLDHDMNPKISDFGLARAFEVGQNQANTKRVMGTYGYMAPEYAMGGLFSVKSDVFSFGVLVLEIICGRKNGGFYLSDSQNLLVYAWRTWNEGKCLELMDPMLEKSFMRNEVERCIEIGLLCVQEDARDRPTISDVVVMLASDTVVVPKPKHPAFSIGRMASEDISTSKSSKNLSINDITSSITLPR*


CDS Sequence:
>Vu_14007.1
ATGATAGGAACACAAGGAAAAGTGAGATCAATATTCTTTAGTTTCTTGTTATTACTGAGTTTCAGATCATTCAGTACAAAGGCCAAAGCACAGTCATCCCTGGGAAGTAACTGCGAAAACACCACCCAACAGACTCTCAGCAGTGCATACCAAACTAACCTTGATAGAATCCTAACCTGGATGTCCTCGGATGCAGCCACAAGCAATGGTTATAACCACAACACCATAGGCACCAATAGCTCTGTGTATGGCCTCTATGATTGTGGTGGTGATGTGGCTGGATACTTTTGTCAATTTTGTATTGCCACTGCTGTAAAAGAAGCCCCTCAGCGCTGCTCCAATAGGCTGTCTGCTGTAGTGTGGAATGATTACTGCGTTATAAGGTACTCAAATGAGGACTTCTTTGGGAAAGCTATTACATACCCAATATGGCATACTCCTGGAACAAAAAACATATCCAACACGGCAGAGATTCAGAGAGGTGAGGATTTTTGGAGAAGTATGATCAGCAAAGCTACTAATGAAACCAACCAGTTGTACTATAAGGATGGCTTCAATTTGAGTGCTACTGAGAGTAGGTATGGTGTGGTGCAATGCACCAGAGATCTCACAAATGAAGGGTGCAGGCAGTGTTTGGAGGACATACTTGCTGAAGTTCCCAAATGTTGTGAACAAAAAATAGCATATATGGTTTGGACTGGAAGTTGCTTGATGAAGTATGATGATTATATGTTCTACCTTCTTGCCAACCAAACACCTTCAGCTCCTGCCCCCAATCCGCAAACAGATGTTGAGAAAAGAAAACAATTCGATTGGAAACTAAGATTAAGCATTATCCATGGAATAGCAAGAGGTATTTTATACCTTCATGAAGACTCTCAACTCAGACTAATCCATAGAGATCTCAAAGCCAGCAACGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAGTGGGACAGAACCAGGCAAATACAAAACGAGTGATGGGCACTTATGGATACATGGCTCCTGAATATGCTATGGGAGGACTATTTTCAGTGAAATCTGATGTCTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGGAGAAAGAACGGTGGGTTCTACCTGTCAGATAGTCAAAATCTTCTTGTATACGCATGGAGAACATGGAATGAAGGAAAATGTTTGGAATTGATGGATCCAATGCTGGAAAAATCTTTCATGCGAAATGAAGTAGAAAGATGCATAGAGATTGGTTTGTTGTGTGTTCAAGAAGATGCAAGAGATAGACCAACCATATCCGATGTTGTAGTAATGCTGGCGAGTGACACAGTGGTCGTTCCAAAACCCAAGCACCCAGCATTTTCAATTGGAAGGATGGCCTCAGAGGACATCTCTACATCAAAAAGTTCCAAGAATCTTTCCATTAATGATATAACGTCCTCGATTACTTTACCGAGGTAA


Promoter Sequence:
>Vu_14007::LG3:41878555-41880555(-)
ACCTGCTCCATTCGATGAAAATCGACATTAGAAACAAAGAGGACATTCACGAAATGTTCTCTCCATCAAAAGTCGTGTCAAAAAGATAGTACAAGAAGGTGGAAGTCATCCATGAAGATGACATCCATTCAGTGAAATTTGGTGTTTTCAACTCTAGAGTACTTGTTCTAGAGATCATTTATGGTCAAACTCTTCTTTTATATGAGTCTTTCACCCTTATTGGTCATCAAATTATTCAACAAATCTTAATGAGTTTAACATTGTTGACAGAATTGCATATGCTTGTAGGCTTGGAGAACATGGGGTTCAGGAAAATGTTTGGAAACGATTGATCCAATGCTGGAAAAATCTTTCTTAGGTAATGCACTTGAGAGTTCTATACACATTGGTTTGTTGTGTGTTAAAGAAGATGCGAAAGATACCAACAATGTCTCATGTGGTTTTAATGTTGGCAAGTGATTAAATGGTTCTTCCAAAACCCAAGCACTGTGCATTTTCAATTGGAATAATGGCATCAGAGGAAGTGTATACATCAAAAAGTTCTAAGAAGGTTTCCAATAATGATCTAACTGTCTCTATTTTCTTTACCAAGATGATAAACAATTGCATAAAGGATTTGCCAGTTCTCAATTAATATTACCAAGTTGTATTTATCATTGATTTATACATATATAAATTATCTATTAAATGTATGCATTTATCATTTAAAATTGATCTGAGTGATTTTTACATTCTCAATTAATAAAAAATTGCTTGTTAGTATGATAGTATCTTTCATATCTAAAGCAGTAAGAATTTATAATAAACATTACTGTGTATATATATATATATATGTTAAACATAATTTCTTTAGAAAATATCTTATTAATTATTATTTCCAGAAAAATAATTGTATTATCTCCAAAAGTCAGTGATCAAAATATCAAATTTTAAAATAAACTTTAAAATTAAATAAAATTTCAAGGAATAAAATATAATAAAGAAGCAAAATCAATTAAAATATAAAATCATGACTTCCCAATTCATTTTTTAGCTAGCTGTGCTGTTAATATATTTTTAATTATACATTTGATTTAATTTTTAAAATAGTACTGCTAAAATTATTAAAAATGATATTTATGAGTTTATGAATATATGAAACATACTTTCATCATCGTATACTCCACCAAAACAATATCGCAGACACACACGTTAGTAATTTAATAATTATACTTTCAAATATTTACAACATCACCAACTTCAATGTTATTGTTTGAAATGTCTACAAGTAATAGACCATTCATCGATTAATGTATTTAAAATTAGTGTCAATGTTAACTATCTAGTGTGAATGATATGAAATTCACTTCCACCAACGACCATTAAAATGGAAAACCAAGAGCTTCTACCTTGGGACTTGCGAGGTAATATCCTTTCCGATGGATATGGATGATTAAACTTTATTCAATTAATAATAGATATCATAATAATTTATATTCTATTTCAATCGATCCTTCGATACTTTATCAGTTTTAGATTAAGCTTAAGAATGTAAAATGCCTTTTTTCTTTTAATCTGGATAGTTAACACATTCTTAATTTGGTATATAAGGCATCAAATAAAAATTCGTCACATGTATAGGGATCAAATTAACAATGTCTGAGACGTATAGGAACAACATTATTCTACAATATTTTGTATTTTCTCTTTGATTTCCTTCAGGTGAAAATGATTGATTATCTATAAGCAAAGTTGCACACGTTCCTGATGTCAGAAGGGCTTCCAGATACAAATTCAAAGTCAACTAGTACGAATTTTAACAGGGCTCGCCGTCAATTGTTGACGGGTTCGTTAACATTTTAGAAGTGTTGAATATCAAATTTAAGGTTCATCGTCTTTAATATTTGTTGCTAAAGAATAGTAACAGAGGATGAATAATAAATGAAACTTATGGTTTGAAATGCATTACTCGCCATATGTTTCAACCATTGTAGCCAATAACATAATTAAGCAAGTACTTC


Gene Sequence:
>Vu_14007(-)
ATGATAGGAACACAAGGAAAAGTGAGATCAATATTCTTTAGTTTCTTGTTATTACTGAGTTTCAGATCATTCAGTACAAAGGCCAAAGCACAGTCATCCCTGGGAAGTAACTGCGAAAACACCACCCAACAGACTCTCAGCAGTGCATACCAAACTAACCTTGATAGAATCCTAACCTGGATGTCCTCGGATGCAGCCACAAGCAATGGTTATAACCACAACACCATAGGCACCAATAGCTCTGTGTATGGCCTCTATGATTGTGGTGGTGATGTGGCTGGATACTTTTGTCAATTTTGTATTGCCACTGCTGTAAAAGAAGCCCCTCAGCGCTGCTCCAATAGGCTGTCTGCTGTAGTGTGGAATGATTACTGCGTTATAAGGTACTCAAATGAGGACTTCTTTGGGAAAGCTATTACATACCCAATATGGCATACTCCTGGAACAAAAAACATATCCAACACGGCAGAGATTCAGAGAGGTGAGGATTTTTGGAGAAGTATGATCAGCAAAGCTACTAATGAAACCAACCAGTTGTACTATAAGGATGGCTTCAATTTGAGTGCTACTGAGAGTAGGTATGGTGTGGTGCAATGCACCAGAGATCTCACAAATGAAGGGTGCAGGCAGTGTTTGGAGGACATACTTGCTGAAGTTCCCAAATGTTGTGAACAAAAAATAGCATATATGGTTTGGACTGGAAGTTGCTTGATGAAGTATGATGATTATATGTTCTACCTTCTTGCCAACCAAACACCTTCAGCTCCTGCCCCCAATCCGCAAACAGGTGAATCTTAATCCTATTACAGAACTTGTTATTTACTTTGCGAAACAAATTTTAAAAATCGATTGTTTTGTTAATATAATATAACCTATCTCTCCCTTTGCCTTCTATTTTTACCATCTAACCAATCTTATATCTACATCTTCTGTACTGTCACAGATAAACAAGGGGTTAATAACAGGACAAGAATATTGATCATTATCATCAGTTTGATCGGGGCAATAATTGTACTATGTTTCAGCCTATATTGCTTCTGGTACAGGAAAAGGATGAGAAAAGCTAATTATAAAGAAAAAACGAGGGATGGGGTTAGAGAAGGTAATTTGCTCGTAGCACAGATTCCTTGATTTATATGATGGCTAATTTGTCCCAGTCAAATAAGACTTTTTTTCTCAGCTATGAACTCACAAACTTCTCTTGTAGAAGAGCTACCTCTACCTTCATTTCATAAAATTCAATCAGAGGAAACGTGGAGCACCGACCTGCCTAGAATCCCATTTGTCACAATTCTACAGAGTACTGATAACTTTTCAGAAGCCTCTAAATTAGGTGAAGGTGGATTCGGCCCTGTTTACAAGGTAGTAATGATTTAGAGTTTTGGATATAGATTTCTTATTGCCAACTTCTATTTATTTCAAACTTTTATCAGGGAAATCTACCTGATGGAAGACAAATTGCAGTAAAAAGACTGTCAAAATTTTCTGGTCAAGGCTCAGAGGAGTTCAATAATGAAGTAATGTTTATAGCTAAATTGAGGCATCGCAATCTTGTAAGACTTCTGGCATGCTGCTTAGAGGAAAATGAAAAGATACTGGTATATGAGTATTTGCCAAATAAAAGTCTCGATTTTCACTTATTTGGTATGTTTTCACATTGCTATGGCCAAATCATAGAATTTGTCGTATTTGCTATTTTTTTTGCTTCACTAAATGTTTTTTGGTTCAAATCTCTATGCTGTTATATATTGTCAGATGTTGAGAAAAGAAAACAATTCGATTGGAAACTAAGATTAAGCATTATCCATGGAATAGCAAGAGGTATTTTATACCTTCATGAAGACTCTCAACTCAGACTAATCCATAGAGATCTCAAAGCCAGCAACGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAGTGGGACAGAACCAGGCAAATACAAAACGAGTGATGGGCACTTAGTGAGTTCTACTTGTAACAAATACTTTCAATACAATATCTATGCATGTTTTAGAATTTAGTTATAGTAAACTGGAATTCTTTGCTTTATGTTCCTTGCCACGAGATAATAACAAAGCTCTATTGGTTTCCACTAGTGGATACATGGCTCCTGAATATGCTATGGGAGGACTATTTTCAGTGAAATCTGATGTCTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGGAGAAAGAACGGTGGGTTCTACCTGTCAGATAGTCAAAATCTTCTTGTATACGTAAGTCTTCACTCTAGTGTGGTTGACAAATTATTCAACAATGCTAAGATAACTAAGGCTTATGAGTATTAAAAAACTACAAATCCTTGTGTAGGCATGGAGAACATGGAATGAAGGAAAATGTTTGGAATTGATGGATCCAATGCTGGAAAAATCTTTCATGCGAAATGAAGTAGAAAGATGCATAGAGATTGGTTTGTTGTGTGTTCAAGAAGATGCAAGAGATAGACCAACCATATCCGATGTTGTAGTAATGCTGGCGAGTGACACAGTGGTCGTTCCAAAACCCAAGCACCCAGCATTTTCAATTGGAAGGATGGCCTCAGAGGACATCTCTACATCAAAAAGTTCCAAGAATCTTTCCATTAATGATATAACGTCCTCGATTACTTTACCGAGGTAA